RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 ZNF713Q8N859 430 aaPredicted RBP9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 USP38Q8NB14 1042 aa9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 GIMAP8Q8ND71 665 aaPredicted RBP9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 PHOSPHO2Q8TCD6 241 aa9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 KCNB2Q92953 911 aa9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 BRF1Q92994 677 aa9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 ANO3Q9BYT9 981 aa9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 RNPEPQ9H4A4 650 aa9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 RIC8AQ9NPQ8 531 aa9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 JADE2Q9NQC1 790 aa9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 FAM217BQ9NTX9 383 aaPredicted RBP9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 SETD4Q9NVD3 440 aa9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 UBIAD1Q9Y5Z9 338 aa9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 MYO9BQ13459 2157 aa9.77□□□□□ -0.85
SFSWAP-202ENST00000535202 SMCO2A6NFE2 343 aa9.76□□□□□ -0.85
SFSWAP-202ENST00000535202 RSPH10B2B2RC85 870 aa9.76□□□□□ -0.85
SFSWAP-202ENST00000535202 KIF28PB7ZC32 967 aa9.76□□□□□ -0.85
SFSWAP-202ENST00000535202 TLL1O43897 1013 aa9.76□□□□□ -0.85
SFSWAP-202ENST00000535202 CTSHP09668 335 aa9.76□□□□□ -0.85
SFSWAP-202ENST00000535202 RSPH10BP0C881 870 aa9.76□□□□□ -0.85
SFSWAP-202ENST00000535202 GNAT1P11488 350 aa9.76□□□□□ -0.85
SFSWAP-202ENST00000535202 MARK3P27448 753 aa9.76□□□□□ -0.85
SFSWAP-202ENST00000535202 HOXC8P31273 242 aa9.76□□□□□ -0.85
SFSWAP-202ENST00000535202 ADD1P35611 737 aaKnown RBP9.76□□□□□ -0.85
SFSWAP-202ENST00000535202 RCAN1P53805 252 aa9.76□□□□□ -0.85
SFSWAP-202ENST00000535202 WDR5P61964 334 aaKnown RBP9.76□□□□□ -0.85
SFSWAP-202ENST00000535202 DEFB103AP81534 67 aa9.76□□□□□ -0.85
SFSWAP-202ENST00000535202 ARHGAP4P98171 946 aa9.76□□□□□ -0.85
SFSWAP-202ENST00000535202 ADGRE1Q14246 886 aa9.76□□□□□ -0.85
SFSWAP-202ENST00000535202 MBTPS1Q14703 1052 aa9.76□□□□□ -0.85
SFSWAP-202ENST00000535202 TCTN1Q2MV58 587 aa9.76□□□□□ -0.85
SFSWAP-202ENST00000535202 TMCO2Q7Z6W1 182 aaPredicted RBP9.76□□□□□ -0.85
SFSWAP-202ENST00000535202 NAP1L5Q96NT1 182 aaPredicted RBP9.76□□□□□ -0.85
SFSWAP-202ENST00000535202 CERS4Q9HA82 394 aa9.76□□□□□ -0.85
SFSWAP-202ENST00000535202 TMEM260Q9NX78 707 aa9.76□□□□□ -0.85
SFSWAP-202ENST00000535202 BARHL2Q9NY43 387 aa9.76□□□□□ -0.85
SFSWAP-202ENST00000535202 MICAL3Q7RTP6 2002 aa9.75□□□□□ -0.85
SFSWAP-202ENST00000535202 CCDC196A0A1B0GTZ2 297 aa9.75□□□□□ -0.85
SFSWAP-202ENST00000535202 ABHD14A-ACY1A0A1B0GW23 586 aa9.75□□□□□ -0.85
SFSWAP-202ENST00000535202 GSTTP1A0A1W2PQM5 241 aa9.75□□□□□ -0.85
SFSWAP-202ENST00000535202 LGR5O75473 907 aa9.75□□□□□ -0.85
SFSWAP-202ENST00000535202 FOSP01100 380 aaPredicted RBP9.75□□□□□ -0.85
SFSWAP-202ENST00000535202 SCG2P13521 617 aa9.75□□□□□ -0.85
SFSWAP-202ENST00000535202 NCLP19338 710 aaKnown RBP9.75□□□□□ -0.85
SFSWAP-202ENST00000535202 RPS6KB1P23443 525 aa9.75□□□□□ -0.85
SFSWAP-202ENST00000535202 PSMA5P28066 241 aa9.75□□□□□ -0.85
SFSWAP-202ENST00000535202 ZNF76P36508 570 aa9.75□□□□□ -0.85
SFSWAP-202ENST00000535202 AP3B2Q13367 1082 aa9.75□□□□□ -0.85
SFSWAP-202ENST00000535202 IKBKEQ14164 716 aa9.75□□□□□ -0.85
SFSWAP-202ENST00000535202 CCDC85BQ15834 202 aaPredicted RBP9.75□□□□□ -0.85
SFSWAP-202ENST00000535202 PFKFB3Q16875 520 aaPredicted RBP9.75□□□□□ -0.85
SFSWAP-202ENST00000535202 JAKMIP3Q5VZ66 844 aa9.75□□□□□ -0.85
SFSWAP-202ENST00000535202 MICALL1Q8N3F8 863 aa9.75□□□□□ -0.85
SFSWAP-202ENST00000535202 LMBR1Q8WVP7 490 aa9.75□□□□□ -0.85
SFSWAP-202ENST00000535202 SEPT1Q8WYJ6 367 aa9.75□□□□□ -0.85
SFSWAP-202ENST00000535202 GLG1Q92896 1179 aa9.75□□□□□ -0.85
SFSWAP-202ENST00000535202 MXRA8Q9BRK3 442 aa9.75□□□□□ -0.85
SFSWAP-202ENST00000535202 SDF4Q9BRK5 362 aa9.75□□□□□ -0.85
SFSWAP-202ENST00000535202 ZBED2Q9BTP6 218 aa9.75□□□□□ -0.85
SFSWAP-202ENST00000535202 JPH1Q9HDC5 661 aaPredicted RBP9.75□□□□□ -0.85
SFSWAP-202ENST00000535202 EMSYQ7Z589 1322 aa9.75□□□□□ -0.85
SFSWAP-202ENST00000535202 CDH23Q9H251 3354 aa9.75□□□□□ -0.85
SFSWAP-202ENST00000535202 COL4A4P53420 1690 aaPredicted RBP9.74□□□□□ -0.85
SFSWAP-202ENST00000535202 FSD2A1L4K1 749 aa9.74□□□□□ -0.85
SFSWAP-202ENST00000535202 RFXAPO00287 272 aa9.74□□□□□ -0.85
SFSWAP-202ENST00000535202 MAFGO15525 162 aa9.74□□□□□ -0.85
SFSWAP-202ENST00000535202 EFCAB14O75071 495 aa9.74□□□□□ -0.85
SFSWAP-202ENST00000535202 PPFIA3O75145 1194 aa9.74□□□□□ -0.85
SFSWAP-202ENST00000535202 CAND2O75155 1236 aa9.74□□□□□ -0.85
SFSWAP-202ENST00000535202 ARHGEF15O94989 841 aa9.74□□□□□ -0.85
SFSWAP-202ENST00000535202 ARP10275 920 aa9.74□□□□□ -0.85
SFSWAP-202ENST00000535202 CLK2P49760 499 aaKnown RBP9.74□□□□□ -0.85
SFSWAP-202ENST00000535202 TAP1Q03518 808 aa9.74□□□□□ -0.85
SFSWAP-202ENST00000535202 PPFIA1Q13136 1202 aa9.74□□□□□ -0.85
SFSWAP-202ENST00000535202 FAM117BQ6P1L5 589 aa9.74□□□□□ -0.85
SFSWAP-202ENST00000535202 DBF4BQ8NFT6 615 aa9.74□□□□□ -0.85
SFSWAP-202ENST00000535202 CYP2W1Q8TAV3 490 aa9.74□□□□□ -0.85
SFSWAP-202ENST00000535202 ARNTL2Q8WYA1 636 aa9.74□□□□□ -0.85
SFSWAP-202ENST00000535202 PHKBQ93100 1093 aa9.74□□□□□ -0.85
SFSWAP-202ENST00000535202 COL25A1Q9BXS0 654 aaPredicted RBP9.74□□□□□ -0.85
SFSWAP-202ENST00000535202 GLT8D2Q9H1C3 349 aa9.74□□□□□ -0.85
SFSWAP-202ENST00000535202 SMARCAD1Q9H4L7 1026 aa9.74□□□□□ -0.85
SFSWAP-202ENST00000535202 PRDM6Q9NQX0 595 aa9.74□□□□□ -0.85
SFSWAP-202ENST00000535202 KCNH7Q9NS40 1196 aa9.74□□□□□ -0.85
SFSWAP-202ENST00000535202 ERAP1Q9NZ08 941 aa9.74□□□□□ -0.85
SFSWAP-202ENST00000535202 SLC9A2Q9UBY0 812 aa9.74□□□□□ -0.85
SFSWAP-202ENST00000535202 NRCAMQ92823 1304 aa9.74□□□□□ -0.85
SFSWAP-202ENST00000535202 NID2Q14112 1375 aa9.74□□□□□ -0.85
SFSWAP-202ENST00000535202 SIP14410 1827 aa9.73□□□□□ -0.85
SFSWAP-202ENST00000535202 LCHNA4D1U4 455 aa9.73□□□□□ -0.85
SFSWAP-202ENST00000535202 EPOPA6NHQ4 379 aa9.73□□□□□ -0.85
SFSWAP-202ENST00000535202 DDX39AO00148 427 aaKnown RBP9.73□□□□□ -0.85
SFSWAP-202ENST00000535202 PRPF3O43395 683 aaKnown RBP9.73□□□□□ -0.85
SFSWAP-202ENST00000535202 SREBF1P36956 1147 aa9.73□□□□□ -0.85
SFSWAP-202ENST00000535202 IGBP1P78318 339 aa9.73□□□□□ -0.85
SFSWAP-202ENST00000535202 CCT2P78371 535 aaKnown RBP9.73□□□□□ -0.85
SFSWAP-202ENST00000535202 ADAM17P78536 824 aa9.73□□□□□ -0.85
SFSWAP-202ENST00000535202 AKAP17AQ02040 695 aaKnown RBP9.73□□□□□ -0.85
SFSWAP-202ENST00000535202 GRIK4Q16099 956 aa9.73□□□□□ -0.85
SFSWAP-202ENST00000535202 CEP55Q53EZ4 464 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms