RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 RPLP2P05387 115 aaKnown RBP14.42□□□□□ -0.1
CAPN1-223ENST00000533079 ADAM17P78536 824 aa14.42□□□□□ -0.1
CAPN1-223ENST00000533079 COASYQ13057 564 aa14.42□□□□□ -0.1
CAPN1-223ENST00000533079 ADAM15Q13444 863 aa14.42□□□□□ -0.1
CAPN1-223ENST00000533079 BTG3Q14201 252 aaPredicted RBP14.42□□□□□ -0.1
CAPN1-223ENST00000533079 NEDD9Q14511 834 aa14.42□□□□□ -0.1
CAPN1-223ENST00000533079 CBX2Q14781 532 aaPredicted RBP14.42□□□□□ -0.1
CAPN1-223ENST00000533079 TAF2Q6P1X5 1199 aa14.42□□□□□ -0.1
CAPN1-223ENST00000533079 EFHBQ8N7U6 833 aa14.42□□□□□ -0.1
CAPN1-223ENST00000533079 PHOX2BQ99453 314 aa14.42□□□□□ -0.1
CAPN1-223ENST00000533079 FRMPD4Q14CM0 1322 aa14.41□□□□□ -0.1
CAPN1-223ENST00000533079 ZBTB5O15062 677 aa14.41□□□□□ -0.1
CAPN1-223ENST00000533079 KDM4AO75164 1064 aa14.41□□□□□ -0.1
CAPN1-223ENST00000533079 ICAM3P32942 547 aa14.41□□□□□ -0.1
CAPN1-223ENST00000533079 NUBP1P53384 320 aa14.41□□□□□ -0.1
CAPN1-223ENST00000533079 ZXDAP98168 799 aa14.41□□□□□ -0.1
CAPN1-223ENST00000533079 SIGLEC14Q08ET2 396 aa14.41□□□□□ -0.1
CAPN1-223ENST00000533079 TCF15Q12870 199 aa14.41□□□□□ -0.1
CAPN1-223ENST00000533079 RSPH3Q86UC2 560 aa14.41□□□□□ -0.1
CAPN1-223ENST00000533079 ENAHQ8N8S7 591 aaPredicted RBP14.41□□□□□ -0.1
CAPN1-223ENST00000533079 IL31RAQ8NI17 732 aa14.41□□□□□ -0.1
CAPN1-223ENST00000533079 LMBR1Q8WVP7 490 aa14.41□□□□□ -0.1
CAPN1-223ENST00000533079 MTMR8Q96EF0 704 aa14.41□□□□□ -0.1
CAPN1-223ENST00000533079 INPP4AQ96PE3 977 aaPredicted RBP14.41□□□□□ -0.1
CAPN1-223ENST00000533079 OSBPL7Q9BZF2 842 aa14.41□□□□□ -0.1
CAPN1-223ENST00000533079 EHMT1Q9H9B1 1298 aa14.41□□□□□ -0.1
CAPN1-223ENST00000533079 CFAP54Q96N23 3096 aa14.41□□□□□ -0.1
CAPN1-223ENST00000533079 GCOM1H8Y6P7 765 aaPredicted RBP14.4□□□□□ -0.1
CAPN1-223ENST00000533079 LINC01565O15544 149 aa14.4□□□□□ -0.1
CAPN1-223ENST00000533079 FIBPO43427 364 aa14.4□□□□□ -0.1
CAPN1-223ENST00000533079 SORBS3O60504 671 aa14.4□□□□□ -0.1
CAPN1-223ENST00000533079 GFRA3O60609 400 aa14.4□□□□□ -0.1
CAPN1-223ENST00000533079 DGKIO75912 1065 aa14.4□□□□□ -0.1
CAPN1-223ENST00000533079 POLR2MP0CAP2 368 aa14.4□□□□□ -0.1
CAPN1-223ENST00000533079 PDE1AP54750 535 aa14.4□□□□□ -0.1
CAPN1-223ENST00000533079 ARHGAP4P98171 946 aa14.4□□□□□ -0.1
CAPN1-223ENST00000533079 NMIQ13287 307 aaPredicted RBP14.4□□□□□ -0.1
CAPN1-223ENST00000533079 CMTR2Q8IYT2 770 aaKnown RBP14.4□□□□□ -0.1
CAPN1-223ENST00000533079 GPR20Q99678 358 aa14.4□□□□□ -0.1
CAPN1-223ENST00000533079 SETD4Q9NVD3 440 aa14.4□□□□□ -0.1
CAPN1-223ENST00000533079 PLAGL2Q9UPG8 496 aa14.4□□□□□ -0.1
CAPN1-223ENST00000533079 PCDHA1Q9Y5I3 950 aa14.4□□□□□ -0.1
CAPN1-223ENST00000533079 MYO15AQ9UKN7 3530 aa14.4□□□□□ -0.1
CAPN1-223ENST00000533079 KIAA1671Q9BY89 1806 aa14.39□□□□□ -0.11
CAPN1-223ENST00000533079 TECTAO75443 2155 aa14.39□□□□□ -0.11
CAPN1-223ENST00000533079 GHRP10912 638 aa14.39□□□□□ -0.11
CAPN1-223ENST00000533079 HOXA13P31271 388 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-223ENST00000533079 GTF2F1P35269 517 aaKnown RBP eCLIP14.39□□□□□ -0.11
CAPN1-223ENST00000533079 MGAT3Q09327 533 aa14.39□□□□□ -0.11
CAPN1-223ENST00000533079 IER5LQ5T953 404 aa14.39□□□□□ -0.11
CAPN1-223ENST00000533079 TSHZ1Q6ZSZ6 1077 aa14.39□□□□□ -0.11
CAPN1-223ENST00000533079 UBAC1Q9BSL1 405 aa14.39□□□□□ -0.11
CAPN1-223ENST00000533079 PHF7Q9BWX1 381 aaPredicted RBP14.39□□□□□ -0.11
CAPN1-223ENST00000533079 IGFLR1Q9H665 355 aa14.39□□□□□ -0.11
CAPN1-223ENST00000533079 CNNM2Q9H8M5 875 aa14.39□□□□□ -0.11
CAPN1-223ENST00000533079 VAT1LQ9HCJ6 419 aa14.39□□□□□ -0.11
CAPN1-223ENST00000533079 KLRF2D3W0D1 207 aa14.38□□□□□ -0.11
CAPN1-223ENST00000533079 PPP1R11O60927 126 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-223ENST00000533079 CHRNA1P02708 482 aa14.38□□□□□ -0.11
CAPN1-223ENST00000533079 ATF7P17544 494 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-223ENST00000533079 CAMK1Q14012 370 aa14.38□□□□□ -0.11
CAPN1-223ENST00000533079 LPIN1Q14693 890 aa14.38□□□□□ -0.11
CAPN1-223ENST00000533079 IFIT1BQ5T764 474 aaKnown RBP14.38□□□□□ -0.11
CAPN1-223ENST00000533079 FAM43BQ6ZT52 329 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-223ENST00000533079 CYFIP1Q7L576 1253 aa14.38□□□□□ -0.11
CAPN1-223ENST00000533079 GIMAP8Q8ND71 665 aaPredicted RBP14.38□□□□□ -0.11
CAPN1-223ENST00000533079 GPKOWQ92917 476 aaPredicted RBP eCLIP14.38□□□□□ -0.11
CAPN1-223ENST00000533079 SENP7Q9BQF6 1050 aa14.38□□□□□ -0.11
CAPN1-223ENST00000533079 FTHL17Q9BXU8 183 aa14.38□□□□□ -0.11
CAPN1-223ENST00000533079 KRT23Q9C075 422 aa14.38□□□□□ -0.11
CAPN1-223ENST00000533079 ALG13Q9NP73 1137 aaKnown RBP14.38□□□□□ -0.11
CAPN1-223ENST00000533079 CLEC1BQ9P126 229 aa14.38□□□□□ -0.11
CAPN1-223ENST00000533079 SQORQ9Y6N5 450 aa14.38□□□□□ -0.11
CAPN1-223ENST00000533079 SPATA31C2B4DYI2 1134 aa14.37□□□□□ -0.11
CAPN1-223ENST00000533079 B4E1Z4 1266 aa14.37□□□□□ -0.11
CAPN1-223ENST00000533079 ENPP3O14638 875 aa14.37□□□□□ -0.11
CAPN1-223ENST00000533079 IRX6P78412 446 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-223ENST00000533079 FBXO47Q5MNV8 452 aa14.37□□□□□ -0.11
CAPN1-223ENST00000533079 TRIM50Q86XT4 487 aa14.37□□□□□ -0.11
CAPN1-223ENST00000533079 NPAS4Q8IUM7 802 aa14.37□□□□□ -0.11
CAPN1-223ENST00000533079 ZSWIM5Q9P217 1185 aa14.37□□□□□ -0.11
CAPN1-223ENST00000533079 USP15Q9Y4E8 981 aaPredicted RBP14.37□□□□□ -0.11
CAPN1-223ENST00000533079 PCDHB15Q9Y5E8 787 aa14.37□□□□□ -0.11
CAPN1-223ENST00000533079 MRPL42Q9Y6G3 142 aaKnown RBP14.37□□□□□ -0.11
CAPN1-223ENST00000533079 ITGB1P05556 798 aa14.36□□□□□ -0.11
CAPN1-223ENST00000533079 STAG3L1P0CL83 205 aa14.36□□□□□ -0.11
CAPN1-223ENST00000533079 MRPS9P82933 396 aaKnown RBP14.36□□□□□ -0.11
CAPN1-223ENST00000533079 UBE3AQ05086 875 aa14.36□□□□□ -0.11
CAPN1-223ENST00000533079 IMMTQ16891 758 aaKnown RBP14.36□□□□□ -0.11
CAPN1-223ENST00000533079 XRRA1Q6P2D8 792 aa14.36□□□□□ -0.11
CAPN1-223ENST00000533079 STAG2Q8N3U4 1231 aa14.36□□□□□ -0.11
CAPN1-223ENST00000533079 ASIC4Q96FT7 647 aa14.36□□□□□ -0.11
CAPN1-223ENST00000533079 CDCA3Q99618 268 aaPredicted RBP14.36□□□□□ -0.11
CAPN1-223ENST00000533079 MAD2L2Q9UI95 211 aa14.36□□□□□ -0.11
CAPN1-223ENST00000533079 TUBE1Q9UJT0 475 aa14.36□□□□□ -0.11
CAPN1-223ENST00000533079 MBLAC1A4D2B0 266 aaPredicted RBP14.35□□□□□ -0.11
CAPN1-223ENST00000533079 PALM3A6NDB9 673 aaPredicted RBP14.35□□□□□ -0.11
CAPN1-223ENST00000533079 PROB1E7EW31 1015 aa14.35□□□□□ -0.11
CAPN1-223ENST00000533079 RBAK-RBAKDNI3L0D1 243 aa14.35□□□□□ -0.11
CAPN1-223ENST00000533079 GLP2RO95838 553 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms