RNA–Protein interactions for RNA: ENST00000527718.1

PABPC4-222, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-222	ENST00000527718	IWS1	Q96ST2	819 aa		6.98	□□□□□ -1.29
PABPC4-222	ENST00000527718	ZNF577	Q9BSK1	485 aa		6.98	□□□□□ -1.29
PABPC4-222	ENST00000527718	POLR3C	Q9BUI4	534 aa	Predicted RBP	6.98	□□□□□ -1.29
PABPC4-222	ENST00000527718	NUP58	Q9BVL2	599 aa		6.98	□□□□□ -1.29
PABPC4-222	ENST00000527718	THAP9	Q9H5L6	903 aa		6.98	□□□□□ -1.29
PABPC4-222	ENST00000527718	RPAP3	Q9H6T3	665 aa	Predicted RBP	6.98	□□□□□ -1.29
PABPC4-222	ENST00000527718	SLC38A10	Q9HBR0	1119 aa		6.98	□□□□□ -1.29
PABPC4-222	ENST00000527718	KCNMB3	Q9NPA1	279 aa		6.98	□□□□□ -1.29
PABPC4-222	ENST00000527718	SEL1L	Q9UBV2	794 aa		6.98	□□□□□ -1.29
PABPC4-222	ENST00000527718	NFE2L3	Q9Y4A8	694 aa		6.98	□□□□□ -1.29
PABPC4-222	ENST00000527718	COL4A3BP	Q9Y5P4	624 aa		6.98	□□□□□ -1.29
PABPC4-222	ENST00000527718	ZHX2	Q9Y6X8	837 aa		6.98	□□□□□ -1.29
PABPC4-222	ENST00000527718		A0A1W2PRG0	241 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718		H0YCG3	227 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	MEIS2	O14770	477 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	ZNF500	O60304	480 aa	Predicted RBP	6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	IPO7	O95373	1038 aa	Known RBP	6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	ALAS1	P13196	640 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	VCAM1	P19320	739 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	ECE1	P42892	770 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	KCNJ6	P48051	423 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	HSD17B4	P51659	736 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	CCNA1	P78396	465 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	KRT76	Q01546	638 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	SPP2	Q13103	211 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	MTMR2	Q13614	643 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	ZYX	Q15942	572 aa	Known RBP	6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	UBE2S	Q16763	222 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	SH3D19	Q5HYK7	790 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	EARS2	Q5JPH6	523 aa	Known RBP	6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	LRCH2	Q5VUJ6	765 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	ARHGEF16	Q5VV41	709 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	PCNX4	Q63HM2	1172 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	SPECC1L	Q69YQ0	1117 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	USP17L6P	Q6QN14	398 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	RNF207	Q6ZRF8	634 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	C11orf57	Q6ZUT1	292 aa	Predicted RBP	6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	OTUD6A	Q7L8S5	288 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	USP37	Q86T82	979 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	FCHSD1	Q86WN1	690 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	CLEC10A	Q8IUN9	316 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	SIAH1	Q8IUQ4	282 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	CNGA4	Q8IV77	575 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	RETREG2	Q8NC44	543 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	ZNF784	Q8NCA9	323 aa	Predicted RBP	6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	DNER	Q8NFT8	737 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	ACER1	Q8TDN7	264 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	ZNF592	Q92610	1267 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	TRIM47	Q96LD4	638 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	TRERF1	Q96PN7	1200 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	CDK5RAP2	Q96SN8	1893 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	TRIM9	Q9C026	710 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	ACAD9	Q9H845	621 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	CGN	Q9P2M7	1197 aa	Known RBP	6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	PCDHAC2	Q9Y5I4	1007 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	GREB1L	Q9C091	1923 aa	Predicted RBP	6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	UBE4B	O95155	1302 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	PHLPP2	Q6ZVD8	1323 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	ZNF541	Q9H0D2	1346 aa		6.97	□□□□□ -1.29
PABPC4-222	ENST00000527718	COL4A5	P29400	1685 aa		6.96	□□□□□ -1.29
PABPC4-222	ENST00000527718	TCHH	Q07283	1943 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	VWA5A	O00534	786 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	CALU	O43852	315 aa	Predicted RBP	6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	TLL1	O43897	1013 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	TDP2	O95551	362 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	IDE	P14735	1019 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	CCNE1	P24864	410 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	EPHX2	P34913	555 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	EPS15	P42566	896 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	SNRPF	P62306	86 aa	Known RBP	6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	PPP2R5C	Q13362	524 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	EPHA7	Q15375	998 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	TMEM119	Q4V9L6	283 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	NAALADL2	Q58DX5	795 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	NBPF12	Q5TAG4	269 aa	Predicted RBP	6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	NCAPH2	Q6IBW4	605 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	KLHL10	Q6JEL2	608 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	TREML4	Q6UXN2	200 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	SMAP1	Q8IYB5	467 aa	Predicted RBP	6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	MYOCD	Q8IZQ8	938 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	CRIPAK	Q8N1N5	446 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	GUF1	Q8N442	669 aa	Known RBP	6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	ZNF526	Q8TF50	670 aa	Predicted RBP	6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	NELFB	Q8WX92	580 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	GPRASP2	Q96D09	838 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	NUP88	Q99567	741 aa	Predicted RBP	6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	MXRA8	Q9BRK3	442 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	NUCKS1	Q9H1E3	243 aa	Known RBP	6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	TMEM60	Q9H2L4	133 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	CPVL	Q9H3G5	476 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	ZSWIM4	Q9H7M6	989 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	LUC7L	Q9NQ29	371 aa	Known RBP	6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	TMEM260	Q9NX78	707 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	IFNK	Q9P0W0	207 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	PGAP2	Q9UHJ9	254 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	ODF2L	Q9ULJ1	636 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	DAAM1	Q9Y4D1	1078 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	PPME1	Q9Y570	386 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	SCN9A	Q15858	1988 aa		6.96	□□□□□ -1.3
PABPC4-222	ENST00000527718	ARHGEF35	A5YM69	484 aa		6.95	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms