RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 RLBP1P12271 317 aa6.37□□□□□ -1.39
PABPC1-223ENST00000523636 EPHA1P21709 976 aa6.37□□□□□ -1.39
PABPC1-223ENST00000523636 ZNF76P36508 570 aa6.37□□□□□ -1.39
PABPC1-223ENST00000523636 RABGGTBP53611 331 aa6.37□□□□□ -1.39
PABPC1-223ENST00000523636 FANCCQ00597 558 aa6.37□□□□□ -1.39
PABPC1-223ENST00000523636 IKBKEQ14164 716 aa6.37□□□□□ -1.39
PABPC1-223ENST00000523636 FAM110CQ1W6H9 321 aa6.37□□□□□ -1.39
PABPC1-223ENST00000523636 GJC2Q5T442 439 aaPredicted RBP6.37□□□□□ -1.39
PABPC1-223ENST00000523636 ZFYVE27Q5T4F4 411 aa6.37□□□□□ -1.39
PABPC1-223ENST00000523636 MEI1Q5TIA1 1274 aa6.37□□□□□ -1.39
PABPC1-223ENST00000523636 FAM117BQ6P1L5 589 aa6.37□□□□□ -1.39
PABPC1-223ENST00000523636 C8orf86Q6ZUL3 223 aa6.37□□□□□ -1.39
PABPC1-223ENST00000523636 SPRED2Q7Z698 418 aa6.37□□□□□ -1.39
PABPC1-223ENST00000523636 PRRT2Q7Z6L0 340 aaPredicted RBP6.37□□□□□ -1.39
PABPC1-223ENST00000523636 ADSSL1Q8N142 457 aa6.37□□□□□ -1.39
PABPC1-223ENST00000523636 DTWD1Q8N5C7 304 aa6.37□□□□□ -1.39
PABPC1-223ENST00000523636 TRPV1Q8NER1 839 aa6.37□□□□□ -1.39
PABPC1-223ENST00000523636 FSD1Q9BTV5 496 aa6.37□□□□□ -1.39
PABPC1-223ENST00000523636 COA1Q9GZY4 146 aa6.37□□□□□ -1.39
PABPC1-223ENST00000523636 SLC28A3Q9HAS3 691 aa6.37□□□□□ -1.39
PABPC1-223ENST00000523636 SH2B1Q9NRF2 756 aaPredicted RBP6.37□□□□□ -1.39
PABPC1-223ENST00000523636 MIS18AQ9NYP9 233 aa6.37□□□□□ -1.39
PABPC1-223ENST00000523636 RPS6KL1Q9Y6S9 549 aa6.37□□□□□ -1.39
PABPC1-223ENST00000523636 CELSR3Q9NYQ7 3312 aa6.37□□□□□ -1.39
PABPC1-223ENST00000523636 A0A1B0GUL6 1792 aa6.36□□□□□ -1.39
PABPC1-223ENST00000523636 LOC285556D6RIA3 1793 aa6.36□□□□□ -1.39
PABPC1-223ENST00000523636 MYO7AQ13402 2215 aa6.36□□□□□ -1.39
PABPC1-223ENST00000523636 SH3BP5O60239 455 aa6.36□□□□□ -1.39
PABPC1-223ENST00000523636 NEFMP07197 916 aa6.36□□□□□ -1.39
PABPC1-223ENST00000523636 ESRRAP11474 423 aaPredicted RBP6.36□□□□□ -1.39
PABPC1-223ENST00000523636 PAX3P23760 479 aa6.36□□□□□ -1.39
PABPC1-223ENST00000523636 NBL1P41271 181 aa6.36□□□□□ -1.39
PABPC1-223ENST00000523636 ZP2Q05996 745 aa6.36□□□□□ -1.39
PABPC1-223ENST00000523636 PPP2R3AQ06190 1150 aa6.36□□□□□ -1.39
PABPC1-223ENST00000523636 LEXMQ3ZCV2 418 aa6.36□□□□□ -1.39
PABPC1-223ENST00000523636 MCM10Q7L590 875 aa6.36□□□□□ -1.39
PABPC1-223ENST00000523636 CRACR2BQ8N4Y2 399 aaPredicted RBP6.36□□□□□ -1.39
PABPC1-223ENST00000523636 ZSCAN1Q8NBB4 408 aa6.36□□□□□ -1.39
PABPC1-223ENST00000523636 LPAR1Q92633 364 aa6.36□□□□□ -1.39
PABPC1-223ENST00000523636 RNF34Q969K3 372 aa6.36□□□□□ -1.39
PABPC1-223ENST00000523636 SPOCK3Q9BQ16 436 aa6.36□□□□□ -1.39
PABPC1-223ENST00000523636 OSGEPQ9NPF4 335 aa6.36□□□□□ -1.39
PABPC1-223ENST00000523636 TMEM39AQ9NV64 488 aa6.36□□□□□ -1.39
PABPC1-223ENST00000523636 FLRT1Q9NZU1 646 aa6.36□□□□□ -1.39
PABPC1-223ENST00000523636 GABBR1Q9UBS5 961 aa6.36□□□□□ -1.39
PABPC1-223ENST00000523636 MUTYHQ9UIF7 546 aa6.36□□□□□ -1.39
PABPC1-223ENST00000523636 ZNF112Q9UJU3 913 aa6.36□□□□□ -1.39
PABPC1-223ENST00000523636 PNMA2Q9UL42 364 aa6.36□□□□□ -1.39
PABPC1-223ENST00000523636 HECTD1Q9ULT8 2610 aa6.36□□□□□ -1.39
PABPC1-223ENST00000523636 RELNP78509 3460 aa6.35□□□□□ -1.39
PABPC1-223ENST00000523636 PTPRSQ13332 1948 aa6.35□□□□□ -1.39
PABPC1-223ENST00000523636 MYO1BO43795 1136 aa6.35□□□□□ -1.39
PABPC1-223ENST00000523636 CLTBP09497 229 aa6.35□□□□□ -1.39
PABPC1-223ENST00000523636 ARL4DP49703 201 aa6.35□□□□□ -1.39
PABPC1-223ENST00000523636 CACNB3P54284 484 aa6.35□□□□□ -1.39
PABPC1-223ENST00000523636 RBM10P98175 930 aaKnown RBP6.35□□□□□ -1.39
PABPC1-223ENST00000523636 FAAP100Q0VG06 881 aa6.35□□□□□ -1.39
PABPC1-223ENST00000523636 DCTN1Q14203 1278 aa6.35□□□□□ -1.39
PABPC1-223ENST00000523636 RAB30Q15771 203 aa6.35□□□□□ -1.39
PABPC1-223ENST00000523636 ZNF423Q2M1K9 1284 aa6.35□□□□□ -1.39
PABPC1-223ENST00000523636 CCDC144BQ3MJ40 725 aa6.35□□□□□ -1.39
PABPC1-223ENST00000523636 LINC00114Q6XXX2 140 aa6.35□□□□□ -1.39
PABPC1-223ENST00000523636 ZNF365Q70YC5 407 aa6.35□□□□□ -1.39
PABPC1-223ENST00000523636 HS2ST1Q7LGA3 356 aa6.35□□□□□ -1.39
PABPC1-223ENST00000523636 PHACTR3Q96KR7 559 aa6.35□□□□□ -1.39
PABPC1-223ENST00000523636 PRRX2Q99811 253 aa6.35□□□□□ -1.39
PABPC1-223ENST00000523636 MTA3Q9BTC8 594 aa6.35□□□□□ -1.39
PABPC1-223ENST00000523636 ANP32EQ9BTT0 268 aa6.35□□□□□ -1.39
PABPC1-223ENST00000523636 TANGO6Q9C0B7 1094 aa6.35□□□□□ -1.39
PABPC1-223ENST00000523636 UBE2ZQ9H832 354 aaPredicted RBP6.35□□□□□ -1.39
PABPC1-223ENST00000523636 CERS4Q9HA82 394 aa6.35□□□□□ -1.39
PABPC1-223ENST00000523636 DLL3Q9NYJ7 618 aa6.35□□□□□ -1.39
PABPC1-223ENST00000523636 DDX20Q9UHI6 824 aaKnown RBP6.35□□□□□ -1.39
PABPC1-223ENST00000523636 MSRAQ9UJ68 235 aa6.35□□□□□ -1.39
PABPC1-223ENST00000523636 MKL2Q9ULH7 1088 aa6.35□□□□□ -1.39
PABPC1-223ENST00000523636 SLC45A1Q9Y2W3 748 aa6.35□□□□□ -1.39
PABPC1-223ENST00000523636 KALRNO60229 2985 aa6.35□□□□□ -1.39
PABPC1-223ENST00000523636 AKAP13Q12802 2813 aa6.35□□□□□ -1.39
PABPC1-223ENST00000523636 TEX15Q9BXT5 2789 aa6.35□□□□□ -1.39
PABPC1-223ENST00000523636 SPDYE3A6NKU9 549 aa6.34□□□□□ -1.39
PABPC1-223ENST00000523636 CXCL11O14625 94 aa6.34□□□□□ -1.39
PABPC1-223ENST00000523636 GNB5O14775 395 aa6.34□□□□□ -1.39
PABPC1-223ENST00000523636 ACRP10323 421 aa6.34□□□□□ -1.39
PABPC1-223ENST00000523636 RAG1P15918 1043 aa6.34□□□□□ -1.39
PABPC1-223ENST00000523636 CCT4P50991 539 aaKnown RBP6.34□□□□□ -1.39
PABPC1-223ENST00000523636 HDLBPQ00341 1268 aaKnown RBP6.34□□□□□ -1.39
PABPC1-223ENST00000523636 PWP1Q13610 501 aa6.34□□□□□ -1.39
PABPC1-223ENST00000523636 HERC4Q5GLZ8 1057 aaPredicted RBP6.34□□□□□ -1.39
PABPC1-223ENST00000523636 TREML2Q5T2D2 321 aa6.34□□□□□ -1.39
PABPC1-223ENST00000523636 KRBA2Q6ZNG9 492 aa6.34□□□□□ -1.39
PABPC1-223ENST00000523636 METTL16Q86W50 562 aaKnown RBP6.34□□□□□ -1.39
PABPC1-223ENST00000523636 KLHL23Q8NBE8 558 aa6.34□□□□□ -1.39
PABPC1-223ENST00000523636 DHX38Q92620 1227 aaKnown RBP6.34□□□□□ -1.39
PABPC1-223ENST00000523636 FERMT2Q96AC1 680 aa6.34□□□□□ -1.39
PABPC1-223ENST00000523636 VWCEQ96DN2 955 aa6.34□□□□□ -1.39
PABPC1-223ENST00000523636 RSRP1Q9BUV0 290 aa6.34□□□□□ -1.39
PABPC1-223ENST00000523636 MAF1Q9H063 256 aa6.34□□□□□ -1.39
PABPC1-223ENST00000523636 PIF1Q9H611 641 aa6.34□□□□□ -1.39
PABPC1-223ENST00000523636 MINPP1Q9UNW1 487 aa6.34□□□□□ -1.39
PABPC1-223ENST00000523636 SAMM50Q9Y512 469 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms