RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 PHF20Q9BVI0 1012 aa18.64■□□□□ 0.57
PABPC1-221ENST00000522720 LAMA2P24043 3122 aaKnown RBP18.63■□□□□ 0.57
PABPC1-221ENST00000522720 EDIL3O43854 480 aa18.63■□□□□ 0.57
PABPC1-221ENST00000522720 SLC34A2O95436 690 aa18.63■□□□□ 0.57
PABPC1-221ENST00000522720 SMIM10L2AP0DMW4 78 aa18.63■□□□□ 0.57
PABPC1-221ENST00000522720 SMIM10L2BP0DMW5 78 aa18.63■□□□□ 0.57
PABPC1-221ENST00000522720 ACRP10323 421 aa18.63■□□□□ 0.57
PABPC1-221ENST00000522720 FDPSP14324 419 aaKnown RBP18.63■□□□□ 0.57
PABPC1-221ENST00000522720 HOXC8P31273 242 aa18.63■□□□□ 0.57
PABPC1-221ENST00000522720 ZNF200P98182 395 aaPredicted RBP18.63■□□□□ 0.57
PABPC1-221ENST00000522720 SETQ01105 290 aaPredicted RBP18.63■□□□□ 0.57
PABPC1-221ENST00000522720 PTK7Q13308 1070 aa18.63■□□□□ 0.57
PABPC1-221ENST00000522720 ZNF365Q70YC5 407 aa18.63■□□□□ 0.57
PABPC1-221ENST00000522720 RPUSD2Q8IZ73 545 aaKnown RBP18.63■□□□□ 0.57
PABPC1-221ENST00000522720 CCDC155Q8N6L0 562 aa18.63■□□□□ 0.57
PABPC1-221ENST00000522720 NSUN7Q8NE18 718 aaKnown RBP18.63■□□□□ 0.57
PABPC1-221ENST00000522720 CAGE1Q8TC20 777 aa18.63■□□□□ 0.57
PABPC1-221ENST00000522720 DHX38Q92620 1227 aaKnown RBP18.63■□□□□ 0.57
PABPC1-221ENST00000522720 SCLYQ96I15 445 aa18.63■□□□□ 0.57
PABPC1-221ENST00000522720 RNPC3Q96LT9 517 aaKnown RBP18.63■□□□□ 0.57
PABPC1-221ENST00000522720 RNPEPQ9H4A4 650 aa18.63■□□□□ 0.57
PABPC1-221ENST00000522720 KCNJ14Q9UNX9 436 aa18.63■□□□□ 0.57
PABPC1-221ENST00000522720 IPO5O00410 1097 aaKnown RBP18.62■□□□□ 0.57
PABPC1-221ENST00000522720 DHX15O43143 795 aaKnown RBP18.62■□□□□ 0.57
PABPC1-221ENST00000522720 LGR5O75473 907 aa18.62■□□□□ 0.57
PABPC1-221ENST00000522720 IQCF3P0C7M6 154 aa18.62■□□□□ 0.57
PABPC1-221ENST00000522720 ACTR2P61160 394 aa18.62■□□□□ 0.57
PABPC1-221ENST00000522720 RBL2Q08999 1139 aa18.62■□□□□ 0.57
PABPC1-221ENST00000522720 PRR16Q569H4 304 aa18.62■□□□□ 0.57
PABPC1-221ENST00000522720 GPR153Q6NV75 609 aa18.62■□□□□ 0.57
PABPC1-221ENST00000522720 PSRC1Q6PGN9 363 aaPredicted RBP18.62■□□□□ 0.57
PABPC1-221ENST00000522720 TBCKQ8TEA7 893 aa18.62■□□□□ 0.57
PABPC1-221ENST00000522720 VWCEQ96DN2 955 aa18.62■□□□□ 0.57
PABPC1-221ENST00000522720 SMARCAD1Q9H4L7 1026 aa18.62■□□□□ 0.57
PABPC1-221ENST00000522720 UPF2Q9HAU5 1272 aaKnown RBP18.62■□□□□ 0.57
PABPC1-221ENST00000522720 GJB4Q9NTQ9 266 aa18.62■□□□□ 0.57
PABPC1-221ENST00000522720 ERAP1Q9NZ08 941 aa18.62■□□□□ 0.57
PABPC1-221ENST00000522720 SCN5AQ14524 2016 aa18.61■□□□□ 0.57
PABPC1-221ENST00000522720 EMSYQ7Z589 1322 aa18.61■□□□□ 0.57
PABPC1-221ENST00000522720 C17orf102A2RUQ5 167 aa18.61■□□□□ 0.57
PABPC1-221ENST00000522720 ATG7O95352 703 aa18.61■□□□□ 0.57
PABPC1-221ENST00000522720 GNAT1P11488 350 aa18.61■□□□□ 0.57
PABPC1-221ENST00000522720 RFC2P35250 354 aa18.61■□□□□ 0.57
PABPC1-221ENST00000522720 ST3GAL1Q11201 340 aa18.61■□□□□ 0.57
PABPC1-221ENST00000522720 RASIP1Q5U651 963 aa18.61■□□□□ 0.57
PABPC1-221ENST00000522720 SERINC5Q86VE9 423 aa18.61■□□□□ 0.57
PABPC1-221ENST00000522720 AFAP1L1Q8TED9 768 aa18.61■□□□□ 0.57
PABPC1-221ENST00000522720 GLG1Q92896 1179 aa18.61■□□□□ 0.57
PABPC1-221ENST00000522720 ATP6V0A1Q93050 837 aa18.61■□□□□ 0.57
PABPC1-221ENST00000522720 ZNF577Q9BSK1 485 aa18.61■□□□□ 0.57
PABPC1-221ENST00000522720 TBC1D22BQ9NU19 505 aa18.61■□□□□ 0.57
PABPC1-221ENST00000522720 CCNE2O96020 404 aa18.6■□□□□ 0.57
PABPC1-221ENST00000522720 FGBP02675 491 aa18.6■□□□□ 0.57
PABPC1-221ENST00000522720 PFKMP08237 780 aa18.6■□□□□ 0.57
PABPC1-221ENST00000522720 CKBP12277 381 aa18.6■□□□□ 0.57
PABPC1-221ENST00000522720 NONOQ15233 471 aaKnown RBP eCLIP18.6■□□□□ 0.572e-6■■■□□ 15.9
PABPC1-221ENST00000522720 TRIM71Q2Q1W2 868 aaKnown RBP18.6■□□□□ 0.57
PABPC1-221ENST00000522720 KRT25Q7Z3Z0 450 aa18.6■□□□□ 0.57
PABPC1-221ENST00000522720 HERVK_113Q902F9 699 aa18.6■□□□□ 0.57
PABPC1-221ENST00000522720 LENG9Q96B70 501 aa18.6■□□□□ 0.57
PABPC1-221ENST00000522720 ZSCAN31Q96LW9 406 aaPredicted RBP18.6■□□□□ 0.57
PABPC1-221ENST00000522720 PCYT2Q99447 389 aa18.6■□□□□ 0.57
PABPC1-221ENST00000522720 AZI2Q9H6S1 392 aa18.6■□□□□ 0.57
PABPC1-221ENST00000522720 SETD4Q9NVD3 440 aa18.6■□□□□ 0.57
PABPC1-221ENST00000522720 TET1Q8NFU7 2136 aa18.59■□□□□ 0.57
PABPC1-221ENST00000522720 TANC1Q9C0D5 1861 aa18.59■□□□□ 0.57
PABPC1-221ENST00000522720 NRCAMQ92823 1304 aa18.59■□□□□ 0.57
PABPC1-221ENST00000522720 CYP3A7-CYP3A51PA0A087WV96 503 aa18.59■□□□□ 0.57
PABPC1-221ENST00000522720 DDX39AO00148 427 aaKnown RBP18.59■□□□□ 0.57
PABPC1-221ENST00000522720 TREHO43280 583 aa18.59■□□□□ 0.57
PABPC1-221ENST00000522720 JAK2O60674 1132 aa18.59■□□□□ 0.57
PABPC1-221ENST00000522720 SELPP16109 830 aa18.59■□□□□ 0.57
PABPC1-221ENST00000522720 CYP3A7P24462 503 aa18.59■□□□□ 0.57
PABPC1-221ENST00000522720 ADAM17P78536 824 aa18.59■□□□□ 0.57
PABPC1-221ENST00000522720 RABEP1Q15276 862 aa18.59■□□□□ 0.57
PABPC1-221ENST00000522720 ABHD15Q6UXT9 468 aa18.59■□□□□ 0.57
PABPC1-221ENST00000522720 PLPPR4Q7Z2D5 763 aa18.59■□□□□ 0.57
PABPC1-221ENST00000522720 WNT8BQ93098 351 aa18.59■□□□□ 0.57
PABPC1-221ENST00000522720 UIMC1Q96RL1 719 aa18.59■□□□□ 0.57
PABPC1-221ENST00000522720 IGKV6D-21A0A0A0MT36 114 aa18.58■□□□□ 0.56
PABPC1-221ENST00000522720 PARNO95453 639 aaKnown RBP18.58■□□□□ 0.56
PABPC1-221ENST00000522720 MARK3P27448 753 aa18.58■□□□□ 0.56
PABPC1-221ENST00000522720 STAT5BP51692 787 aa18.58■□□□□ 0.56
PABPC1-221ENST00000522720 SMAD3P84022 425 aaKnown RBP18.58■□□□□ 0.56
PABPC1-221ENST00000522720 MOXD1Q6UVY6 613 aa18.58■□□□□ 0.56
PABPC1-221ENST00000522720 LRRC8DQ7L1W4 858 aa18.58■□□□□ 0.56
PABPC1-221ENST00000522720 DEFB128Q7Z7B8 93 aa18.58■□□□□ 0.56
PABPC1-221ENST00000522720 IL27Q8NEV9 243 aa18.58■□□□□ 0.56
PABPC1-221ENST00000522720 LMBR1Q8WVP7 490 aa18.58■□□□□ 0.56
PABPC1-221ENST00000522720 MTIF3Q9H2K0 278 aaKnown RBP18.58■□□□□ 0.56
PABPC1-221ENST00000522720 SH2B1Q9NRF2 756 aaPredicted RBP18.58■□□□□ 0.56
PABPC1-221ENST00000522720 CCDC194A0A1B0GVG4 234 aa18.57■□□□□ 0.56
PABPC1-221ENST00000522720 MSH4O15457 936 aa18.57■□□□□ 0.56
PABPC1-221ENST00000522720 SLC26A2P50443 739 aa18.57■□□□□ 0.56
PABPC1-221ENST00000522720 KRT76Q01546 638 aa18.57■□□□□ 0.56
PABPC1-221ENST00000522720 GPNMBQ14956 572 aa18.57■□□□□ 0.56
PABPC1-221ENST00000522720 INF2Q27J81 1249 aa18.57■□□□□ 0.56
PABPC1-221ENST00000522720 Q4G0T1 1027 aa18.57■□□□□ 0.56
PABPC1-221ENST00000522720 ZNF618Q5T7W0 954 aa18.57■□□□□ 0.56
PABPC1-221ENST00000522720 ZNF746Q6NUN9 644 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms