RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 CCDC8Q9H0W5 538 aaPredicted RBP5.8□□□□□ -1.48
SDCBP-207ENST00000520168 MKNK2Q9HBH9 465 aa5.8□□□□□ -1.48
SDCBP-207ENST00000520168 FAM86C1Q9NVL1 165 aa5.8□□□□□ -1.48
SDCBP-207ENST00000520168 TLR7Q9NYK1 1049 aaKnown RBP5.8□□□□□ -1.48
SDCBP-207ENST00000520168 KAT6AQ92794 2004 aa5.8□□□□□ -1.48
SDCBP-207ENST00000520168 PTPRZ1P23471 2315 aaPredicted RBP5.8□□□□□ -1.48
SDCBP-207ENST00000520168 TMEM232C9JQI7 657 aa5.79□□□□□ -1.48
SDCBP-207ENST00000520168 MBD4O95243 580 aa5.79□□□□□ -1.48
SDCBP-207ENST00000520168 ALAS1P13196 640 aa5.79□□□□□ -1.48
SDCBP-207ENST00000520168 CASTP20810 708 aaKnown RBP5.79□□□□□ -1.48
SDCBP-207ENST00000520168 RASA1P20936 1047 aa5.79□□□□□ -1.48
SDCBP-207ENST00000520168 ATP8B2P98198 1209 aa5.79□□□□□ -1.48
SDCBP-207ENST00000520168 COASYQ13057 564 aa5.79□□□□□ -1.48
SDCBP-207ENST00000520168 IKQ13123 557 aaPredicted RBP5.79□□□□□ -1.48
SDCBP-207ENST00000520168 GPNMBQ14956 572 aa5.79□□□□□ -1.48
SDCBP-207ENST00000520168 SBK1Q52WX2 424 aa5.79□□□□□ -1.48
SDCBP-207ENST00000520168 HSP90AB4PQ58FF6 505 aa5.79□□□□□ -1.48
SDCBP-207ENST00000520168 ZSCAN25Q6NSZ9 544 aa5.79□□□□□ -1.48
SDCBP-207ENST00000520168 CTR9Q6PD62 1173 aa5.79□□□□□ -1.48
SDCBP-207ENST00000520168 ASCL5Q7RTU5 278 aa5.79□□□□□ -1.48
SDCBP-207ENST00000520168 TMCO2Q7Z6W1 182 aaPredicted RBP5.79□□□□□ -1.48
SDCBP-207ENST00000520168 KRI1Q8N9T8 703 aaKnown RBP5.79□□□□□ -1.48
SDCBP-207ENST00000520168 SMRP1Q8NCR6 262 aa5.79□□□□□ -1.48
SDCBP-207ENST00000520168 DNERQ8NFT8 737 aa5.79□□□□□ -1.48
SDCBP-207ENST00000520168 STAG1Q8WVM7 1258 aa5.79□□□□□ -1.48
SDCBP-207ENST00000520168 TOP1MTQ969P6 601 aa5.79□□□□□ -1.48
SDCBP-207ENST00000520168 GMCL1Q96IK5 515 aa5.79□□□□□ -1.48
SDCBP-207ENST00000520168 ZFP42Q96MM3 310 aa5.79□□□□□ -1.48
SDCBP-207ENST00000520168 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.79□□□□□ -1.48
SDCBP-207ENST00000520168 MAF1Q9H063 256 aa5.79□□□□□ -1.48
SDCBP-207ENST00000520168 ARMT1Q9H993 441 aa5.79□□□□□ -1.48
SDCBP-207ENST00000520168 ALG13Q9NP73 1137 aaKnown RBP5.79□□□□□ -1.48
SDCBP-207ENST00000520168 EVA1BQ9NVM1 165 aa5.79□□□□□ -1.48
SDCBP-207ENST00000520168 MTMR4Q9NYA4 1195 aa5.79□□□□□ -1.48
SDCBP-207ENST00000520168 CLIP2Q9UDT6 1046 aa5.79□□□□□ -1.48
SDCBP-207ENST00000520168 GTF2IRD1Q9UHL9 959 aa5.79□□□□□ -1.48
SDCBP-207ENST00000520168 IGKV6D-41A0A0C4DH26 115 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 H0Y858 1186 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 ANP32CO43423 234 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 CAND2O75155 1236 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 TBX10O75333 385 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 MMP1P03956 469 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 ICAM1P05362 532 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 ATF7P17544 494 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-207ENST00000520168 VARSP26640 1264 aaKnown RBP5.78□□□□□ -1.48
SDCBP-207ENST00000520168 ICAM3P32942 547 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 ADD2P35612 726 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 SLC1A4P43007 532 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 NDUFV1P49821 464 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 VCPP55072 806 aaKnown RBP5.78□□□□□ -1.48
SDCBP-207ENST00000520168 UBE3CQ15386 1083 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 DGKDQ16760 1214 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 NAALADL2Q58DX5 795 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 PLEKHG4Q58EX7 1191 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 SLFN13Q68D06 897 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 GDF6Q6KF10 455 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-207ENST00000520168 FAM117BQ6P1L5 589 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 NSMFQ6X4W1 530 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 AACSQ86V21 672 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 TRMT2AQ8IZ69 625 aaKnown RBP5.78□□□□□ -1.48
SDCBP-207ENST00000520168 FAM9BQ8IZU0 186 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 ZNF444Q8N0Y2 327 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-207ENST00000520168 C7orf31Q8N865 590 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 APBB2Q92870 758 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 ASIC4Q96FT7 647 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 MSLNLQ96KJ4 702 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 RIPOR3Q96MK2 946 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 CTAGE1Q96RT6 745 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 DNAJC2Q99543 621 aaKnown RBP5.78□□□□□ -1.48
SDCBP-207ENST00000520168 PHF7Q9BWX1 381 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-207ENST00000520168 PLVAPQ9BX97 442 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 FAM117AQ9C073 453 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 PLXNA4Q9HCM2 1894 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 TLR9Q9NR96 1032 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 PAG1Q9NWQ8 432 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 CCPG1Q9ULG6 757 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 PCDHGC3Q9UN70 934 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 SLC4A4Q9Y6R1 1079 aa5.78□□□□□ -1.48
SDCBP-207ENST00000520168 EPG5Q9HCE0 2579 aa5.77□□□□□ -1.49
SDCBP-207ENST00000520168 GVINP1Q7Z2Y8 2422 aa5.77□□□□□ -1.49
SDCBP-207ENST00000520168 ASPMQ8IZT6 3477 aa5.77□□□□□ -1.49
SDCBP-207ENST00000520168 MYO7AQ13402 2215 aa5.77□□□□□ -1.49
SDCBP-207ENST00000520168 CYP2D7A0A087X1C5 515 aa5.77□□□□□ -1.49
SDCBP-207ENST00000520168 PTPDC1A2A3K4 754 aa5.77□□□□□ -1.49
SDCBP-207ENST00000520168 RSPH10B2B2RC85 870 aa5.77□□□□□ -1.49
SDCBP-207ENST00000520168 GOLIM4O00461 696 aa5.77□□□□□ -1.49
SDCBP-207ENST00000520168 PRKAB2O43741 272 aa5.77□□□□□ -1.49
SDCBP-207ENST00000520168 GH1P01241 217 aa5.77□□□□□ -1.49
SDCBP-207ENST00000520168 MMP3P08254 477 aa5.77□□□□□ -1.49
SDCBP-207ENST00000520168 RSPH10BP0C881 870 aa5.77□□□□□ -1.49
SDCBP-207ENST00000520168 SRGAP2BP0DMP2 458 aa5.77□□□□□ -1.49
SDCBP-207ENST00000520168 TXNP10599 105 aaKnown RBP5.77□□□□□ -1.49
SDCBP-207ENST00000520168 TRIM27P14373 513 aa5.77□□□□□ -1.49
SDCBP-207ENST00000520168 PTGS1P23219 599 aa5.77□□□□□ -1.49
SDCBP-207ENST00000520168 EDNRBP24530 442 aa5.77□□□□□ -1.49
SDCBP-207ENST00000520168 CTNNB1P35222 781 aa5.77□□□□□ -1.49
SDCBP-207ENST00000520168 RARSP54136 660 aaKnown RBP5.77□□□□□ -1.49
SDCBP-207ENST00000520168 PDE4BQ07343 736 aa5.77□□□□□ -1.49
SDCBP-207ENST00000520168 DLX2Q07687 328 aaPredicted RBP5.77□□□□□ -1.49
SDCBP-207ENST00000520168 PDE4CQ08493 712 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms