RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 BEND4Q6ZU67 534 aa8.82□□□□□ -1
RFC1-213ENST00000512275 SLC7A14Q8TBB6 771 aa8.82□□□□□ -1
RFC1-213ENST00000512275 CHAC2Q8WUX2 184 aa8.82□□□□□ -1
RFC1-213ENST00000512275 FAM126AQ9BYI3 521 aaPredicted RBP8.82□□□□□ -1
RFC1-213ENST00000512275 CAAP1Q9H8G2 361 aa8.82□□□□□ -1
RFC1-213ENST00000512275 SMC4Q9NTJ3 1288 aa8.82□□□□□ -1
RFC1-213ENST00000512275 BABAM1Q9NWV8 329 aa8.82□□□□□ -1
RFC1-213ENST00000512275 DDX56Q9NY93 547 aaKnown RBP8.82□□□□□ -1
RFC1-213ENST00000512275 SFMBT1Q9UHJ3 866 aa8.82□□□□□ -1
RFC1-213ENST00000512275 TJP1Q07157 1748 aa8.82□□□□□ -1
RFC1-213ENST00000512275 RNF123Q5XPI4 1314 aa8.81□□□□□ -1
RFC1-213ENST00000512275 ERVV-2B6SEH9 535 aa8.81□□□□□ -1
RFC1-213ENST00000512275 DHX15O43143 795 aaKnown RBP8.81□□□□□ -1
RFC1-213ENST00000512275 DNAJC8O75937 253 aaPredicted RBP8.81□□□□□ -1
RFC1-213ENST00000512275 CT47B1P0C2W7 299 aaPredicted RBP8.81□□□□□ -1
RFC1-213ENST00000512275 ZNF865P0CJ78 1059 aaPredicted RBP8.81□□□□□ -1
RFC1-213ENST00000512275 HOXC12P31275 282 aa8.81□□□□□ -1
RFC1-213ENST00000512275 EIF4A1P60842 406 aaKnown RBP8.81□□□□□ -1
RFC1-213ENST00000512275 PPP2R5DQ14738 602 aa8.81□□□□□ -1
RFC1-213ENST00000512275 NFKBIBQ15653 356 aa8.81□□□□□ -1
RFC1-213ENST00000512275 NTRK3Q16288 839 aa8.81□□□□□ -1
RFC1-213ENST00000512275 SLC35F1Q5T1Q4 408 aa8.81□□□□□ -1
RFC1-213ENST00000512275 SFRP5Q5T4F7 317 aa8.81□□□□□ -1
RFC1-213ENST00000512275 CLEC10AQ8IUN9 316 aa8.81□□□□□ -1
RFC1-213ENST00000512275 GIMAP7Q8NHV1 300 aa8.81□□□□□ -1
RFC1-213ENST00000512275 SSH1Q8WYL5 1049 aa8.81□□□□□ -1
RFC1-213ENST00000512275 SYTL4Q96C24 671 aaPredicted RBP8.81□□□□□ -1
RFC1-213ENST00000512275 CCDC140Q96MF4 163 aa8.81□□□□□ -1
RFC1-213ENST00000512275 HEXIM2Q96MH2 286 aaKnown RBP8.81□□□□□ -1
RFC1-213ENST00000512275 KRTAP4-12Q9BQ66 201 aa8.81□□□□□ -1
RFC1-213ENST00000512275 FAM83CQ9BQN1 747 aa8.81□□□□□ -1
RFC1-213ENST00000512275 KCNF1Q9H3M0 494 aa8.81□□□□□ -1
RFC1-213ENST00000512275 TYW1Q9NV66 732 aaKnown RBP8.81□□□□□ -1
RFC1-213ENST00000512275 TMOD3Q9NYL9 352 aa8.81□□□□□ -1
RFC1-213ENST00000512275 MAGEC2Q9UBF1 373 aaPredicted RBP8.81□□□□□ -1
RFC1-213ENST00000512275 MAPRE3Q9UPY8 281 aa8.81□□□□□ -1
RFC1-213ENST00000512275 IGF2BP3O00425 579 aaKnown RBP eCLIP8.8□□□□□ -1
RFC1-213ENST00000512275 PRAMEF1O95521 474 aa8.8□□□□□ -1
RFC1-213ENST00000512275 GABREP78334 506 aa8.8□□□□□ -1
RFC1-213ENST00000512275 LRP8Q14114 963 aa8.8□□□□□ -1
RFC1-213ENST00000512275 ZNF772Q68DY9 489 aaPredicted RBP8.8□□□□□ -1
RFC1-213ENST00000512275 ZNF790Q6PG37 636 aa8.8□□□□□ -1
RFC1-213ENST00000512275 LRRTM3Q86VH5 581 aa8.8□□□□□ -1
RFC1-213ENST00000512275 TTC5Q8N0Z6 440 aa8.8□□□□□ -1
RFC1-213ENST00000512275 TMEM145Q8NBT3 493 aa8.8□□□□□ -1
RFC1-213ENST00000512275 KCTD13Q8WZ19 329 aa8.8□□□□□ -1
RFC1-213ENST00000512275 FRAT1Q92837 279 aaPredicted RBP8.8□□□□□ -1
RFC1-213ENST00000512275 ZDHHC15Q96MV8 337 aa8.8□□□□□ -1
RFC1-213ENST00000512275 TARS2Q9BW92 718 aaKnown RBP8.8□□□□□ -1
RFC1-213ENST00000512275 CYP26B1Q9NR63 512 aa8.8□□□□□ -1
RFC1-213ENST00000512275 CHST7Q9NS84 486 aa8.8□□□□□ -1
RFC1-213ENST00000512275 KCNH3Q9ULD8 1083 aa8.8□□□□□ -1
RFC1-213ENST00000512275 SF3B6Q9Y3B4 125 aaKnown RBP8.8□□□□□ -1
RFC1-213ENST00000512275 N4BP2Q86UW6 1770 aaPredicted RBP8.8□□□□□ -1
RFC1-213ENST00000512275 BCL9O00512 1426 aa8.8□□□□□ -1
RFC1-213ENST00000512275 PRAMEF22A3QJZ6 481 aa8.79□□□□□ -1
RFC1-213ENST00000512275 H0Y8X5 98 aa8.79□□□□□ -1
RFC1-213ENST00000512275 ADMP35318 185 aa8.79□□□□□ -1
RFC1-213ENST00000512275 SOX5P35711 763 aa8.79□□□□□ -1
RFC1-213ENST00000512275 CTSKP43235 329 aa8.79□□□□□ -1
RFC1-213ENST00000512275 NMIQ13287 307 aaPredicted RBP8.79□□□□□ -1
RFC1-213ENST00000512275 PLEKHG6Q3KR16 790 aa8.79□□□□□ -1
RFC1-213ENST00000512275 OGFOD3Q6PK18 319 aa8.79□□□□□ -1
RFC1-213ENST00000512275 BRAPQ7Z569 592 aa8.79□□□□□ -1
RFC1-213ENST00000512275 ZAR1Q86SH2 424 aa8.79□□□□□ -1
RFC1-213ENST00000512275 JAMLQ86YT9 394 aa8.79□□□□□ -1
RFC1-213ENST00000512275 PIGBQ92521 554 aa8.79□□□□□ -1
RFC1-213ENST00000512275 DSCC1Q9BVC3 393 aa8.79□□□□□ -1
RFC1-213ENST00000512275 HDAC8Q9BY41 377 aa8.79□□□□□ -1
RFC1-213ENST00000512275 METTL14Q9HCE5 456 aaKnown RBP8.79□□□□□ -1
RFC1-213ENST00000512275 MINPP1Q9UNW1 487 aa8.79□□□□□ -1
RFC1-213ENST00000512275 TNNQ9UQP3 1299 aa8.79□□□□□ -1
RFC1-213ENST00000512275 ATP8A1Q9Y2Q0 1164 aa8.79□□□□□ -1
RFC1-213ENST00000512275 GPR55Q9Y2T6 319 aaPredicted RBP8.79□□□□□ -1
RFC1-213ENST00000512275 SHISA3A0PJX4 238 aa8.78□□□□□ -1
RFC1-213ENST00000512275 BLACEA4D250 179 aa8.78□□□□□ -1
RFC1-213ENST00000512275 PRR33A8MZF0 331 aa8.78□□□□□ -1
RFC1-213ENST00000512275 EFCAB14O75071 495 aa8.78□□□□□ -1
RFC1-213ENST00000512275 CPP00450 1065 aa8.78□□□□□ -1
RFC1-213ENST00000512275 SNRPB2P08579 225 aaKnown RBP8.78□□□□□ -1
RFC1-213ENST00000512275 EIF2S2P20042 333 aaKnown RBP8.78□□□□□ -1
RFC1-213ENST00000512275 RBM6P78332 1123 aaKnown RBP8.78□□□□□ -1
RFC1-213ENST00000512275 AMPD2Q01433 879 aa8.78□□□□□ -1
RFC1-213ENST00000512275 ALDH1L2Q3SY69 923 aa8.78□□□□□ -1
RFC1-213ENST00000512275 C20orf194Q5TEA3 1177 aa8.78□□□□□ -1
RFC1-213ENST00000512275 DENND5AQ6IQ26 1287 aa8.78□□□□□ -1
RFC1-213ENST00000512275 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.78□□□□□ -1
RFC1-213ENST00000512275 PRPF38AQ8NAV1 312 aaKnown RBP8.78□□□□□ -1
RFC1-213ENST00000512275 PIWIL2Q8TC59 973 aaKnown RBP8.78□□□□□ -1
RFC1-213ENST00000512275 ZNF496Q96IT1 587 aaPredicted RBP8.78□□□□□ -1
RFC1-213ENST00000512275 MCMBPQ9BTE3 642 aa8.78□□□□□ -1
RFC1-213ENST00000512275 IRF2BPLQ9H1B7 796 aa8.78□□□□□ -1
RFC1-213ENST00000512275 KLHL42Q9P2K6 505 aa8.78□□□□□ -1
RFC1-213ENST00000512275 NDOR1Q9UHB4 597 aa8.78□□□□□ -1
RFC1-213ENST00000512275 CAPN6Q9Y6Q1 641 aa8.78□□□□□ -1
RFC1-213ENST00000512275 RGS12O14924 1447 aa8.78□□□□□ -1
RFC1-213ENST00000512275 LY75O60449 1722 aa8.77□□□□□ -1
RFC1-213ENST00000512275 COL5A3P25940 1745 aaPredicted RBP8.77□□□□□ -1
RFC1-213ENST00000512275 HEG1Q9ULI3 1381 aa8.77□□□□□ -1.01
RFC1-213ENST00000512275 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms