RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 PRSS53Q2L4Q9 553 aa4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 SV2CQ496J9 727 aa4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 GLIPR1L2Q4G1C9 344 aa4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 STEAP3Q658P3 488 aa4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 C6orf15Q6UXA7 325 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 ZNF227Q86WZ6 799 aa4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 CIR1Q86X95 450 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 PPIL6Q8IXY8 311 aa4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 CNPY4Q8N129 248 aa4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 Q8N1X5 172 aa4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 KREMEN2Q8NCW0 462 aa4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 IGDCC4Q8TDY8 1250 aa4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 ZCCHC14Q8WYQ9 949 aaKnown RBP4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 CLIC6Q96NY7 704 aa4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 SORCS2Q96PQ0 1159 aa4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 TGIF2Q9GZN2 237 aa4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 KLC2Q9H0B6 622 aa4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 SPC25Q9HBM1 224 aa4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 SWAP70Q9UH65 585 aa4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 TCEAL9Q9UHQ7 104 aa4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 STRIP2Q9ULQ0 834 aa4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 PRKAB1Q9Y478 270 aa4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 PCDHA2Q9Y5H9 948 aa4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 COL4A3BPQ9Y5P4 624 aa4.58□□□□□ -1.68
HMGB3P15-201ENST00000507326 B2RBV5 119 aa4.57□□□□□ -1.68
HMGB3P15-201ENST00000507326 DNAJC6O75061 913 aa4.57□□□□□ -1.68
HMGB3P15-201ENST00000507326 STK10O94804 968 aaKnown RBP4.57□□□□□ -1.68
HMGB3P15-201ENST00000507326 LCP1P13796 627 aa4.57□□□□□ -1.68
HMGB3P15-201ENST00000507326 GDF5P43026 501 aa4.57□□□□□ -1.68
HMGB3P15-201ENST00000507326 LSAMPQ13449 338 aa4.57□□□□□ -1.68
HMGB3P15-201ENST00000507326 SF1Q15637 639 aaKnown RBP4.57□□□□□ -1.68
HMGB3P15-201ENST00000507326 CHRNA2Q15822 529 aa4.57□□□□□ -1.68
HMGB3P15-201ENST00000507326 ZNF585AQ6P3V2 769 aa4.57□□□□□ -1.68
HMGB3P15-201ENST00000507326 TEPPQ6URK8 271 aa4.57□□□□□ -1.68
HMGB3P15-201ENST00000507326 TMC5Q6UXY8 1006 aa4.57□□□□□ -1.68
HMGB3P15-201ENST00000507326 ARHGEF18Q6ZSZ5 1173 aa4.57□□□□□ -1.68
HMGB3P15-201ENST00000507326 FILIP1Q7Z7B0 1213 aa4.57□□□□□ -1.68
HMGB3P15-201ENST00000507326 PALM2Q8IXS6 379 aa4.57□□□□□ -1.68
HMGB3P15-201ENST00000507326 KBTBD2Q8IY47 623 aa4.57□□□□□ -1.68
HMGB3P15-201ENST00000507326 SCYL1Q96KG9 808 aa4.57□□□□□ -1.68
HMGB3P15-201ENST00000507326 OSBPL2Q9H1P3 480 aa4.57□□□□□ -1.68
HMGB3P15-201ENST00000507326 CD248Q9HCU0 757 aa4.57□□□□□ -1.68
HMGB3P15-201ENST00000507326 CLDND1Q9NY35 253 aa4.57□□□□□ -1.68
HMGB3P15-201ENST00000507326 H7BY64 318 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 SMAD7O15105 426 aaKnown RBP4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 TADA3O75528 432 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 CYP7B1O75881 506 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 ZRANB2O95218 330 aaKnown RBP eCLIP4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 LRG1P02750 347 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 LTBRP36941 435 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 HMGA2P52926 109 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 EPHB4P54760 987 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 PPP2CBP62714 309 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 PPP2CAP67775 309 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 ARID5AQ03989 594 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 EMC4Q5J8M3 183 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 ACBD5Q5T8D3 534 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 LARP1BQ659C4 914 aaKnown RBP4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 CCSAPQ6IQ19 270 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 PKN3Q6P5Z2 889 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 TRMT10BQ6PF06 316 aaKnown RBP4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 ZFPM1Q8IX07 1006 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 FAM9BQ8IZU0 186 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 NME8Q8N427 588 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 PAF1Q8N7H5 531 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 PMM1Q92871 262 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 WRNIP1Q96S55 665 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 TMEM209Q96SK2 561 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 PTPN18Q99952 460 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 VPS11Q9H270 941 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 ACBD3Q9H3P7 528 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 DEF6Q9H4E7 631 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 RBPJLQ9UBG7 517 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 FTSJ1Q9UET6 329 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 WASF3Q9UPY6 502 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 INPP5FQ9Y2H2 1132 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 ZDHHC9Q9Y397 364 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 TBX22Q9Y458 520 aa4.56□□□□□ -1.68
HMGB3P15-201ENST00000507326 SUSD5O60279 629 aa4.55□□□□□ -1.68
HMGB3P15-201ENST00000507326 B4GALT4O60513 344 aa4.55□□□□□ -1.68
HMGB3P15-201ENST00000507326 CPP00450 1065 aa4.55□□□□□ -1.68
HMGB3P15-201ENST00000507326 SLPIP03973 132 aa4.55□□□□□ -1.68
HMGB3P15-201ENST00000507326 SCG5P05408 212 aa4.55□□□□□ -1.68
HMGB3P15-201ENST00000507326 DNAJA1P31689 397 aaKnown RBP4.55□□□□□ -1.68
HMGB3P15-201ENST00000507326 C4orf46Q504U0 113 aa4.55□□□□□ -1.68
HMGB3P15-201ENST00000507326 PHF19Q5T6S3 580 aa4.55□□□□□ -1.68
HMGB3P15-201ENST00000507326 DENND5AQ6IQ26 1287 aa4.55□□□□□ -1.68
HMGB3P15-201ENST00000507326 CRIP3Q6Q6R5 217 aa4.55□□□□□ -1.68
HMGB3P15-201ENST00000507326 FAM178BQ8IXR5 827 aa4.55□□□□□ -1.68
HMGB3P15-201ENST00000507326 KLHL36Q8N4N3 616 aa4.55□□□□□ -1.68
HMGB3P15-201ENST00000507326 DNERQ8NFT8 737 aa4.55□□□□□ -1.68
HMGB3P15-201ENST00000507326 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.55□□□□□ -1.68
HMGB3P15-201ENST00000507326 GPATCH3Q96I76 525 aa4.55□□□□□ -1.68
HMGB3P15-201ENST00000507326 RPS6KC1Q96S38 1066 aa4.55□□□□□ -1.68
HMGB3P15-201ENST00000507326 CDK5RAP1Q96SZ6 601 aaKnown RBP4.55□□□□□ -1.68
HMGB3P15-201ENST00000507326 SENP7Q9BQF6 1050 aa4.55□□□□□ -1.68
HMGB3P15-201ENST00000507326 ZNF747Q9BV97 191 aa4.55□□□□□ -1.68
HMGB3P15-201ENST00000507326 MRIQ9BWK5 157 aa4.55□□□□□ -1.68
HMGB3P15-201ENST00000507326 MAF1Q9H063 256 aa4.55□□□□□ -1.68
HMGB3P15-201ENST00000507326 EPB41L1Q9H4G0 881 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms