RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 PLSCR1O15162 318 aa3.7□□□□□ -1.82
HMGB1P35-201ENST00000503360 CSF2RBP32927 897 aa3.7□□□□□ -1.82
HMGB1P35-201ENST00000503360 SCRN1Q12765 414 aa3.7□□□□□ -1.82
HMGB1P35-201ENST00000503360 KCNAB2Q13303 367 aa3.7□□□□□ -1.82
HMGB1P35-201ENST00000503360 SMAD2Q15796 467 aaKnown RBP3.7□□□□□ -1.82
HMGB1P35-201ENST00000503360 INF2Q27J81 1249 aa3.7□□□□□ -1.82
HMGB1P35-201ENST00000503360 CCDC144BQ3MJ40 725 aa3.7□□□□□ -1.82
HMGB1P35-201ENST00000503360 LARP1BQ659C4 914 aaKnown RBP3.7□□□□□ -1.82
HMGB1P35-201ENST00000503360 Q6ZSN1 163 aa3.7□□□□□ -1.82
HMGB1P35-201ENST00000503360 TRIM48Q8IWZ4 208 aa3.7□□□□□ -1.82
HMGB1P35-201ENST00000503360 IFNL2Q8IZJ0 200 aa3.7□□□□□ -1.82
HMGB1P35-201ENST00000503360 CELF2-AS1Q8N7Q2 184 aa3.7□□□□□ -1.82
HMGB1P35-201ENST00000503360 DTX3Q8N9I9 347 aa3.7□□□□□ -1.82
HMGB1P35-201ENST00000503360 GIMAP8Q8ND71 665 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P35-201ENST00000503360 NPLOC4Q8TAT6 608 aa3.7□□□□□ -1.82
HMGB1P35-201ENST00000503360 FAM89AQ96GI7 184 aa3.7□□□□□ -1.82
HMGB1P35-201ENST00000503360 TRMT2BQ96GJ1 504 aaKnown RBP3.7□□□□□ -1.82
HMGB1P35-201ENST00000503360 OSBPL2Q9H1P3 480 aa3.7□□□□□ -1.82
HMGB1P35-201ENST00000503360 ZSWIM4Q9H7M6 989 aa3.7□□□□□ -1.82
HMGB1P35-201ENST00000503360 ST7Q9NRC1 585 aa3.7□□□□□ -1.82
HMGB1P35-201ENST00000503360 COA3Q9Y2R0 106 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P35-201ENST00000503360 PCDHB4Q9Y5E5 795 aa3.7□□□□□ -1.82
HMGB1P35-201ENST00000503360 CCDC85CA6NKD9 419 aa3.69□□□□□ -1.82
HMGB1P35-201ENST00000503360 MYO1BO43795 1136 aa3.69□□□□□ -1.82
HMGB1P35-201ENST00000503360 MAFKO60675 156 aa3.69□□□□□ -1.82
HMGB1P35-201ENST00000503360 DDAH1O94760 285 aa3.69□□□□□ -1.82
HMGB1P35-201ENST00000503360 PEX11BO96011 259 aa3.69□□□□□ -1.82
HMGB1P35-201ENST00000503360 KNG1P01042 644 aa3.69□□□□□ -1.82
HMGB1P35-201ENST00000503360 ADH4P08319 380 aa3.69□□□□□ -1.82
HMGB1P35-201ENST00000503360 NAT2P11245 290 aa3.69□□□□□ -1.82
HMGB1P35-201ENST00000503360 MAKP20794 623 aa3.69□□□□□ -1.82
HMGB1P35-201ENST00000503360 FXNQ16595 210 aa3.69□□□□□ -1.82
HMGB1P35-201ENST00000503360 ACBD5Q5T8D3 534 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P35-201ENST00000503360 DPY19L2P1Q6NXN4 242 aa3.69□□□□□ -1.82
HMGB1P35-201ENST00000503360 CEP68Q76N32 757 aa3.69□□□□□ -1.82
HMGB1P35-201ENST00000503360 MRGPRGQ86SM5 289 aa3.69□□□□□ -1.82
HMGB1P35-201ENST00000503360 NUDT10Q8NFP7 164 aa3.69□□□□□ -1.82
HMGB1P35-201ENST00000503360 MICAL1Q8TDZ2 1067 aa3.69□□□□□ -1.82
HMGB1P35-201ENST00000503360 EXTL1Q92935 676 aa3.69□□□□□ -1.82
HMGB1P35-201ENST00000503360 NEIL1Q96FI4 390 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P35-201ENST00000503360 NUDT11Q96G61 164 aa3.69□□□□□ -1.82
HMGB1P35-201ENST00000503360 TMEM169Q96HH4 297 aa3.69□□□□□ -1.82
HMGB1P35-201ENST00000503360 SMOC1Q9H4F8 434 aa3.69□□□□□ -1.82
HMGB1P35-201ENST00000503360 FAM86C1Q9NVL1 165 aa3.69□□□□□ -1.82
HMGB1P35-201ENST00000503360 SIRPGQ9P1W8 387 aa3.69□□□□□ -1.82
HMGB1P35-201ENST00000503360 TMEFF2Q9UIK5 374 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P35-201ENST00000503360 PCDHB10Q9UN67 800 aa3.69□□□□□ -1.82
HMGB1P35-201ENST00000503360 AKT3Q9Y243 479 aa3.69□□□□□ -1.82
HMGB1P35-201ENST00000503360 LOC105371045A0A1W2PR82 267 aa3.68□□□□□ -1.82
HMGB1P35-201ENST00000503360 SCG5P05408 212 aa3.68□□□□□ -1.82
HMGB1P35-201ENST00000503360 FPR2P25090 351 aa3.68□□□□□ -1.82
HMGB1P35-201ENST00000503360 ACRV1P26436 265 aa3.68□□□□□ -1.82
HMGB1P35-201ENST00000503360 RAC3P60763 192 aa3.68□□□□□ -1.82
HMGB1P35-201ENST00000503360 SERINC3Q13530 473 aa3.68□□□□□ -1.82
HMGB1P35-201ENST00000503360 BMS1Q14692 1282 aaKnown RBP3.68□□□□□ -1.82
HMGB1P35-201ENST00000503360 DDR2Q16832 855 aa3.68□□□□□ -1.82
HMGB1P35-201ENST00000503360 STEAP3Q658P3 488 aa3.68□□□□□ -1.82
HMGB1P35-201ENST00000503360 VHLLQ6RSH7 139 aa3.68□□□□□ -1.82
HMGB1P35-201ENST00000503360 C6orf15Q6UXA7 325 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P35-201ENST00000503360 TAX1BP1Q86VP1 789 aa3.68□□□□□ -1.82
HMGB1P35-201ENST00000503360 NLRP10Q86W26 655 aa3.68□□□□□ -1.82
HMGB1P35-201ENST00000503360 TRIM59Q8IWR1 403 aa3.68□□□□□ -1.82
HMGB1P35-201ENST00000503360 FAM178BQ8IXR5 827 aa3.68□□□□□ -1.82
HMGB1P35-201ENST00000503360 ULK2Q8IYT8 1036 aa3.68□□□□□ -1.82
HMGB1P35-201ENST00000503360 ARRDC4Q8NCT1 418 aa3.68□□□□□ -1.82
HMGB1P35-201ENST00000503360 BVESQ8NE79 360 aa3.68□□□□□ -1.82
HMGB1P35-201ENST00000503360 FRS2Q8WU20 508 aa3.68□□□□□ -1.82
HMGB1P35-201ENST00000503360 KLHL6Q8WZ60 621 aa3.68□□□□□ -1.82
HMGB1P35-201ENST00000503360 FGD4Q96M96 766 aa3.68□□□□□ -1.82
HMGB1P35-201ENST00000503360 ZSWIM3Q96MP5 696 aa3.68□□□□□ -1.82
HMGB1P35-201ENST00000503360 GNRHR2Q96P88 292 aa3.68□□□□□ -1.82
HMGB1P35-201ENST00000503360 SRPK1Q96SB4 655 aaKnown RBP3.68□□□□□ -1.82
HMGB1P35-201ENST00000503360 NKX2-4Q9H2Z4 354 aa3.68□□□□□ -1.82
HMGB1P35-201ENST00000503360 WASF3Q9UPY6 502 aa3.68□□□□□ -1.82
HMGB1P35-201ENST00000503360 SUGT1Q9Y2Z0 365 aa3.68□□□□□ -1.82
HMGB1P35-201ENST00000503360 B2RBV5 119 aa3.67□□□□□ -1.82
HMGB1P35-201ENST00000503360 GJB6O95452 261 aa3.67□□□□□ -1.82
HMGB1P35-201ENST00000503360 TUBA3CQ13748 450 aa3.67□□□□□ -1.82
HMGB1P35-201ENST00000503360 USP10Q14694 798 aaKnown RBP3.67□□□□□ -1.82
HMGB1P35-201ENST00000503360 ZNF568Q3ZCX4 644 aa3.67□□□□□ -1.82
HMGB1P35-201ENST00000503360 KIAA1211LQ6NV74 962 aa3.67□□□□□ -1.82
HMGB1P35-201ENST00000503360 TUBA3EQ6PEY2 450 aa3.67□□□□□ -1.82
HMGB1P35-201ENST00000503360 PROSER1Q86XN7 944 aa3.67□□□□□ -1.82
HMGB1P35-201ENST00000503360 C1orf210Q8IVY1 113 aa3.67□□□□□ -1.82
HMGB1P35-201ENST00000503360 FUKQ8N0W3 1084 aa3.67□□□□□ -1.82
HMGB1P35-201ENST00000503360 IL17DQ8TAD2 202 aa3.67□□□□□ -1.82
HMGB1P35-201ENST00000503360 NEU4Q8WWR8 484 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P35-201ENST00000503360 DIO2Q92813 273 aa3.67□□□□□ -1.82
HMGB1P35-201ENST00000503360 MKL1Q969V6 931 aa3.67□□□□□ -1.82
HMGB1P35-201ENST00000503360 MRGPRX3Q96LB0 322 aa3.67□□□□□ -1.82
HMGB1P35-201ENST00000503360 CCDC140Q96MF4 163 aa3.67□□□□□ -1.82
HMGB1P35-201ENST00000503360 AGAP2Q99490 1192 aa3.67□□□□□ -1.82
HMGB1P35-201ENST00000503360 EPB41L1Q9H4G0 881 aa3.67□□□□□ -1.82
HMGB1P35-201ENST00000503360 PIF1Q9H611 641 aa3.67□□□□□ -1.82
HMGB1P35-201ENST00000503360 GPRC5CQ9NQ84 441 aa3.67□□□□□ -1.82
HMGB1P35-201ENST00000503360 CDK11AQ9UQ88 783 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P35-201ENST00000503360 DMRT1Q9Y5R6 373 aa3.67□□□□□ -1.82
HMGB1P35-201ENST00000503360 FAM221BA6H8Z2 402 aa3.66□□□□□ -1.82
HMGB1P35-201ENST00000503360 CUTAO60888 179 aa3.66□□□□□ -1.82
HMGB1P35-201ENST00000503360 DGKIO75912 1065 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms