RNA–Protein interactions for RNA: ENST00000494411.5

PCMT1-209, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 4

Gene PCMT1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-209ENST00000494411 PITPNM1O00562 1244 aa21.71■■□□□ 1.07
PCMT1-209ENST00000494411 SMIM10L2AP0DMW4 78 aa21.71■■□□□ 1.07
PCMT1-209ENST00000494411 SMIM10L2BP0DMW5 78 aa21.71■■□□□ 1.07
PCMT1-209ENST00000494411 FDPSP14324 419 aaKnown RBP21.71■■□□□ 1.07
PCMT1-209ENST00000494411 ZNF200P98182 395 aaPredicted RBP21.71■■□□□ 1.07
PCMT1-209ENST00000494411 SETQ01105 290 aaPredicted RBP21.71■■□□□ 1.07
PCMT1-209ENST00000494411 ST3GAL1Q11201 340 aa21.71■■□□□ 1.07
PCMT1-209ENST00000494411 BFSP2Q13515 415 aa21.71■■□□□ 1.07
PCMT1-209ENST00000494411 NSUN7Q8NE18 718 aaKnown RBP21.71■■□□□ 1.07
PCMT1-209ENST00000494411 DHX38Q92620 1227 aaKnown RBP21.71■■□□□ 1.07
PCMT1-209ENST00000494411 PHF20Q9BVI0 1012 aa21.71■■□□□ 1.07
PCMT1-209ENST00000494411 LIMCH1Q9UPQ0 1083 aa21.71■■□□□ 1.07
PCMT1-209ENST00000494411 DDX39AO00148 427 aaKnown RBP21.7■■□□□ 1.06
PCMT1-209ENST00000494411 JAK2O60674 1132 aa21.7■■□□□ 1.06
PCMT1-209ENST00000494411 CIITAP33076 1130 aa21.7■■□□□ 1.06
PCMT1-209ENST00000494411 ACTR2P61160 394 aa21.7■■□□□ 1.06
PCMT1-209ENST00000494411 PRR16Q569H4 304 aa21.7■■□□□ 1.06
PCMT1-209ENST00000494411 TMEM240Q5SV17 173 aa21.7■■□□□ 1.06
PCMT1-209ENST00000494411 PSRC1Q6PGN9 363 aaPredicted RBP21.7■■□□□ 1.06
PCMT1-209ENST00000494411 CCDC155Q8N6L0 562 aa21.7■■□□□ 1.06
PCMT1-209ENST00000494411 RETREG2Q8NC44 543 aa21.7■■□□□ 1.06
PCMT1-209ENST00000494411 WASF1Q92558 559 aa21.7■■□□□ 1.06
PCMT1-209ENST00000494411 C17orf102A2RUQ5 167 aa21.69■■□□□ 1.06
PCMT1-209ENST00000494411 IPO5O00410 1097 aaKnown RBP21.69■■□□□ 1.06
PCMT1-209ENST00000494411 EDIL3O43854 480 aa21.69■■□□□ 1.06
PCMT1-209ENST00000494411 XBP1P17861 261 aa21.69■■□□□ 1.06
PCMT1-209ENST00000494411 HOXC8P31273 242 aa21.69■■□□□ 1.06
PCMT1-209ENST00000494411 ZNF365Q70YC5 407 aa21.69■■□□□ 1.06
PCMT1-209ENST00000494411 CAGE1Q8TC20 777 aa21.69■■□□□ 1.06
PCMT1-209ENST00000494411 TBCKQ8TEA7 893 aa21.69■■□□□ 1.06
PCMT1-209ENST00000494411 GLG1Q92896 1179 aa21.69■■□□□ 1.06
PCMT1-209ENST00000494411 LENG9Q96B70 501 aa21.69■■□□□ 1.06
PCMT1-209ENST00000494411 ZNF577Q9BSK1 485 aa21.69■■□□□ 1.06
PCMT1-209ENST00000494411 UPF2Q9HAU5 1272 aaKnown RBP21.69■■□□□ 1.06
PCMT1-209ENST00000494411 TET1Q8NFU7 2136 aa21.68■■□□□ 1.06
PCMT1-209ENST00000494411 CCNE2O96020 404 aa21.68■■□□□ 1.06
PCMT1-209ENST00000494411 MARK3P27448 753 aa21.68■■□□□ 1.06
PCMT1-209ENST00000494411 USP11P51784 963 aa21.68■■□□□ 1.06
PCMT1-209ENST00000494411 PTK7Q13308 1070 aa21.68■■□□□ 1.06
PCMT1-209ENST00000494411 AFAP1L1Q8TED9 768 aa21.68■■□□□ 1.06
PCMT1-209ENST00000494411 WNT8BQ93098 351 aa21.68■■□□□ 1.06
PCMT1-209ENST00000494411 VWCEQ96DN2 955 aa21.68■■□□□ 1.06
PCMT1-209ENST00000494411 PCYT2Q99447 389 aa21.68■■□□□ 1.06
PCMT1-209ENST00000494411 RNPEPQ9H4A4 650 aa21.68■■□□□ 1.06
PCMT1-209ENST00000494411 SETD4Q9NVD3 440 aa21.68■■□□□ 1.06
PCMT1-209ENST00000494411 ERAP1Q9NZ08 941 aa21.68■■□□□ 1.06
PCMT1-209ENST00000494411 EMSYQ7Z589 1322 aa21.68■■□□□ 1.06
PCMT1-209ENST00000494411 DHX15O43143 795 aaKnown RBP21.67■■□□□ 1.06
PCMT1-209ENST00000494411 LGR5O75473 907 aa21.67■■□□□ 1.06
PCMT1-209ENST00000494411 IQCF3P0C7M6 154 aa21.67■■□□□ 1.06
PCMT1-209ENST00000494411 RBL2Q08999 1139 aa21.67■■□□□ 1.06
PCMT1-209ENST00000494411 TRIM71Q2Q1W2 868 aaKnown RBP21.67■■□□□ 1.06
PCMT1-209ENST00000494411 KRT25Q7Z3Z0 450 aa21.67■■□□□ 1.06
PCMT1-209ENST00000494411 DEFB128Q7Z7B8 93 aa21.67■■□□□ 1.06
PCMT1-209ENST00000494411 SERINC5Q86VE9 423 aa21.67■■□□□ 1.06
PCMT1-209ENST00000494411 CCDC83Q8IWF9 413 aa21.67■■□□□ 1.06
PCMT1-209ENST00000494411 ATP6V0A1Q93050 837 aa21.67■■□□□ 1.06
PCMT1-209ENST00000494411 SMARCAD1Q9H4L7 1026 aa21.67■■□□□ 1.06
PCMT1-209ENST00000494411 WDR81Q562E7 1941 aa21.67■■□□□ 1.06
PCMT1-209ENST00000494411 TREHO43280 583 aa21.66■■□□□ 1.06
PCMT1-209ENST00000494411 CKBP12277 381 aa21.66■■□□□ 1.06
PCMT1-209ENST00000494411 SELPP16109 830 aa21.66■■□□□ 1.06
PCMT1-209ENST00000494411 NONOQ15233 471 aaKnown RBP eCLIP21.66■■□□□ 1.062e-7■■■■□ 24.5
PCMT1-209ENST00000494411 RABEP1Q15276 862 aa21.66■■□□□ 1.06
PCMT1-209ENST00000494411 LRRC8DQ7L1W4 858 aa21.66■■□□□ 1.06
PCMT1-209ENST00000494411 RPUSD2Q8IZ73 545 aaKnown RBP21.66■■□□□ 1.06
PCMT1-209ENST00000494411 OXER1Q8TDS5 423 aa21.66■■□□□ 1.06
PCMT1-209ENST00000494411 LMBR1Q8WVP7 490 aa21.66■■□□□ 1.06
PCMT1-209ENST00000494411 AZI2Q9H6S1 392 aa21.66■■□□□ 1.06
PCMT1-209ENST00000494411 MYH9P35579 1960 aaKnown RBP21.65■■□□□ 1.06
PCMT1-209ENST00000494411 CCDC194A0A1B0GVG4 234 aa21.65■■□□□ 1.06
PCMT1-209ENST00000494411 ATG7O95352 703 aa21.65■■□□□ 1.06
PCMT1-209ENST00000494411 TDP2O95551 362 aa21.65■■□□□ 1.06
PCMT1-209ENST00000494411 FGBP02675 491 aa21.65■■□□□ 1.06
PCMT1-209ENST00000494411 RFC2P35250 354 aa21.65■■□□□ 1.06
PCMT1-209ENST00000494411 FOSBP53539 338 aa21.65■■□□□ 1.06
PCMT1-209ENST00000494411 INF2Q27J81 1249 aa21.65■■□□□ 1.06
PCMT1-209ENST00000494411 RASIP1Q5U651 963 aa21.65■■□□□ 1.06
PCMT1-209ENST00000494411 OTOP2Q7RTS6 562 aa21.65■■□□□ 1.06
PCMT1-209ENST00000494411 TBC1D22BQ9NU19 505 aa21.65■■□□□ 1.06
PCMT1-209ENST00000494411 NRCAMQ92823 1304 aa21.64■■□□□ 1.05
PCMT1-209ENST00000494411 MSH4O15457 936 aa21.64■■□□□ 1.05
PCMT1-209ENST00000494411 PFKMP08237 780 aa21.64■■□□□ 1.05
PCMT1-209ENST00000494411 GNAT1P11488 350 aa21.64■■□□□ 1.05
PCMT1-209ENST00000494411 PPFIA1Q13136 1202 aa21.64■■□□□ 1.05
PCMT1-209ENST00000494411 HERVK_113Q902F9 699 aa21.64■■□□□ 1.05
PCMT1-209ENST00000494411 ZSCAN31Q96LW9 406 aaPredicted RBP21.64■■□□□ 1.05
PCMT1-209ENST00000494411 CXXC1Q9P0U4 656 aaPredicted RBP21.64■■□□□ 1.05
PCMT1-209ENST00000494411 GTF3C3Q9Y5Q9 886 aa21.64■■□□□ 1.05
PCMT1-209ENST00000494411 THPOP40225 353 aa21.63■■□□□ 1.05
PCMT1-209ENST00000494411 STAT5BP51692 787 aa21.63■■□□□ 1.05
PCMT1-209ENST00000494411 ADAM17P78536 824 aa21.63■■□□□ 1.05
PCMT1-209ENST00000494411 GRIK4Q16099 956 aa21.63■■□□□ 1.05
PCMT1-209ENST00000494411 Q4G0T1 1027 aa21.63■■□□□ 1.05
PCMT1-209ENST00000494411 ZNF618Q5T7W0 954 aa21.63■■□□□ 1.05
PCMT1-209ENST00000494411 GPR153Q6NV75 609 aa21.63■■□□□ 1.05
PCMT1-209ENST00000494411 TRAF7Q6Q0C0 670 aa21.63■■□□□ 1.05
PCMT1-209ENST00000494411 ABHD15Q6UXT9 468 aa21.63■■□□□ 1.05
PCMT1-209ENST00000494411 TBC1D32Q96NH3 1257 aa21.63■■□□□ 1.05
PCMT1-209ENST00000494411 SH2B1Q9NRF2 756 aaPredicted RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms