RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 FSCN1Q16658 493 aaKnown RBP17.74■□□□□ 0.43
HPS4-216ENST00000493455 BRDTQ58F21 947 aaPredicted RBP17.74■□□□□ 0.43
HPS4-216ENST00000493455 GNASQ5JWF2 1037 aa17.74■□□□□ 0.43
HPS4-216ENST00000493455 TRMT1LQ7Z2T5 733 aaKnown RBP17.74■□□□□ 0.43
HPS4-216ENST00000493455 CLIC6Q96NY7 704 aa17.74■□□□□ 0.43
HPS4-216ENST00000493455 GPR20Q99678 358 aa17.74■□□□□ 0.43
HPS4-216ENST00000493455 PAK6Q9NQU5 681 aaPredicted RBP17.74■□□□□ 0.43
HPS4-216ENST00000493455 POTEFA5A3E0 1075 aa17.73■□□□□ 0.43
HPS4-216ENST00000493455 PP2D1A8MPX8 630 aa17.73■□□□□ 0.43
HPS4-216ENST00000493455 EML1O00423 815 aa17.73■□□□□ 0.43
HPS4-216ENST00000493455 TFRCP02786 760 aaKnown RBP17.73■□□□□ 0.43
HPS4-216ENST00000493455 MMP3P08254 477 aa17.73■□□□□ 0.43
HPS4-216ENST00000493455 ZNF286BP0CG31 522 aa17.73■□□□□ 0.43
HPS4-216ENST00000493455 PRPHP41219 470 aa17.73■□□□□ 0.43
HPS4-216ENST00000493455 CPT1AP50416 773 aa17.73■□□□□ 0.43
HPS4-216ENST00000493455 GJA9P57773 515 aa17.73■□□□□ 0.43
HPS4-216ENST00000493455 SPECC1Q5M775 1068 aa17.73■□□□□ 0.43
HPS4-216ENST00000493455 ARL6IP4Q66PJ3 421 aaKnown RBP17.73■□□□□ 0.43
HPS4-216ENST00000493455 LHX8Q68G74 356 aa17.73■□□□□ 0.43
HPS4-216ENST00000493455 ZNF746Q6NUN9 644 aaPredicted RBP17.73■□□□□ 0.43
HPS4-216ENST00000493455 KRI1Q8N9T8 703 aaKnown RBP17.73■□□□□ 0.43
HPS4-216ENST00000493455 PPTC7Q8NI37 304 aa17.73■□□□□ 0.43
HPS4-216ENST00000493455 LEO1Q8WVC0 666 aaPredicted RBP17.73■□□□□ 0.43
HPS4-216ENST00000493455 SEPT1Q8WYJ6 367 aa17.73■□□□□ 0.43
HPS4-216ENST00000493455 RAB34Q9BZG1 259 aa17.73■□□□□ 0.43
HPS4-216ENST00000493455 DISC1Q9NRI5 854 aa17.73■□□□□ 0.43
HPS4-216ENST00000493455 LRWD1Q9UFC0 647 aa17.73■□□□□ 0.43
HPS4-216ENST00000493455 Q9Y3F1 56 aa17.73■□□□□ 0.43
HPS4-216ENST00000493455 GSTTP1A0A1W2PQM5 241 aa17.72■□□□□ 0.43
HPS4-216ENST00000493455 WDR64B1ANS9 1081 aa17.72■□□□□ 0.43
HPS4-216ENST00000493455 ADAMTS4O75173 837 aa17.72■□□□□ 0.43
HPS4-216ENST00000493455 PSAPP07602 524 aa17.72■□□□□ 0.43
HPS4-216ENST00000493455 CDC25AP30304 524 aa17.72■□□□□ 0.43
HPS4-216ENST00000493455 JAK3P52333 1124 aa17.72■□□□□ 0.43
HPS4-216ENST00000493455 CYP4A11Q02928 519 aa17.72■□□□□ 0.43
HPS4-216ENST00000493455 PPP2R5CQ13362 524 aa17.72■□□□□ 0.43
HPS4-216ENST00000493455 MIS18BP1Q6P0N0 1132 aa17.72■□□□□ 0.43
HPS4-216ENST00000493455 RNF180Q86T96 592 aa17.72■□□□□ 0.43
HPS4-216ENST00000493455 TRIM50Q86XT4 487 aa17.72■□□□□ 0.43
HPS4-216ENST00000493455 BANK1Q8NDB2 785 aa17.72■□□□□ 0.43
HPS4-216ENST00000493455 KCNG4Q8TDN1 519 aa17.72■□□□□ 0.43
HPS4-216ENST00000493455 U2AF1L4Q8WU68 220 aaKnown RBP17.72■□□□□ 0.43
HPS4-216ENST00000493455 GLG1Q92896 1179 aa17.72■□□□□ 0.43
HPS4-216ENST00000493455 SCAND2PQ9GZW5 306 aaPredicted RBP17.72■□□□□ 0.43
HPS4-216ENST00000493455 CSRNP2Q9H175 543 aa17.72■□□□□ 0.43
HPS4-216ENST00000493455 UPF3AQ9H1J1 476 aaKnown RBP17.72■□□□□ 0.43
HPS4-216ENST00000493455 FBXO2Q9UK22 296 aaPredicted RBP17.72■□□□□ 0.43
HPS4-216ENST00000493455 KBTBD13C9JR72 458 aa17.71■□□□□ 0.43
HPS4-216ENST00000493455 ZEB2O60315 1214 aa17.71■□□□□ 0.43
HPS4-216ENST00000493455 SUPT20HL2P0C7V6 817 aa17.71■□□□□ 0.43
HPS4-216ENST00000493455 SFNP31947 248 aa17.71■□□□□ 0.43
HPS4-216ENST00000493455 FXR2P51116 673 aaKnown RBP eCLIP17.71■□□□□ 0.43
HPS4-216ENST00000493455 SPIRE1Q08AE8 756 aa17.71■□□□□ 0.43
HPS4-216ENST00000493455 LRRC41Q15345 812 aa17.71■□□□□ 0.43
HPS4-216ENST00000493455 DGKDQ16760 1214 aa17.71■□□□□ 0.43
HPS4-216ENST00000493455 SWSAP1Q6NVH7 229 aa17.71■□□□□ 0.43
HPS4-216ENST00000493455 SMAP1Q8IYB5 467 aaPredicted RBP17.71■□□□□ 0.43
HPS4-216ENST00000493455 RASSF8Q8NHQ8 419 aa17.71■□□□□ 0.43
HPS4-216ENST00000493455 ERMNQ8TAM6 284 aa17.71■□□□□ 0.43
HPS4-216ENST00000493455 PPP1R13LQ8WUF5 828 aa17.71■□□□□ 0.43
HPS4-216ENST00000493455 EMID1Q96A84 441 aaPredicted RBP17.71■□□□□ 0.43
HPS4-216ENST00000493455 FERMT2Q96AC1 680 aa17.71■□□□□ 0.43
HPS4-216ENST00000493455 DYDC2Q96IM9 177 aa17.71■□□□□ 0.43
HPS4-216ENST00000493455 AZI2Q9H6S1 392 aa17.71■□□□□ 0.43
HPS4-216ENST00000493455 GABBR1Q9UBS5 961 aa17.71■□□□□ 0.43
HPS4-216ENST00000493455 RCOR1Q9UKL0 485 aa17.71■□□□□ 0.43
HPS4-216ENST00000493455 PCDHA7Q9UN72 937 aa17.71■□□□□ 0.43
HPS4-216ENST00000493455 PCDHA10Q9Y5I2 948 aa17.71■□□□□ 0.43
HPS4-216ENST00000493455 A6NJR5 290 aa17.7■□□□□ 0.42
HPS4-216ENST00000493455 PPP6R2O75170 966 aa17.7■□□□□ 0.42
HPS4-216ENST00000493455 SGPL1O95470 568 aa17.7■□□□□ 0.42
HPS4-216ENST00000493455 LGALS2P05162 132 aa17.7■□□□□ 0.42
HPS4-216ENST00000493455 GJB1P08034 283 aa17.7■□□□□ 0.42
HPS4-216ENST00000493455 MARK3P27448 753 aa17.7■□□□□ 0.42
HPS4-216ENST00000493455 CTTNQ14247 550 aaKnown RBP17.7■□□□□ 0.42
HPS4-216ENST00000493455 KCNA10Q16322 511 aa17.7■□□□□ 0.42
HPS4-216ENST00000493455 CCDC60Q8IWA6 550 aaPredicted RBP17.7■□□□□ 0.42
HPS4-216ENST00000493455 CKAP2LQ8IYA6 745 aa17.7■□□□□ 0.42
HPS4-216ENST00000493455 ARRDC4Q8NCT1 418 aa17.7■□□□□ 0.42
HPS4-216ENST00000493455 SNX29Q8TEQ0 813 aa17.7■□□□□ 0.42
HPS4-216ENST00000493455 VTI1AQ96AJ9 217 aa17.7■□□□□ 0.42
HPS4-216ENST00000493455 PLIN2Q99541 437 aa17.7■□□□□ 0.42
HPS4-216ENST00000493455 EIF2AK1Q9BQI3 630 aaKnown RBP17.7■□□□□ 0.42
HPS4-216ENST00000493455 ZNF302Q9NR11 478 aa17.7■□□□□ 0.42
HPS4-216ENST00000493455 SRPRBQ9Y5M8 271 aaKnown RBP17.7■□□□□ 0.42
HPS4-216ENST00000493455 CTAGE5O15320 804 aa17.69■□□□□ 0.42
HPS4-216ENST00000493455 CUTAO60888 179 aa17.69■□□□□ 0.42
HPS4-216ENST00000493455 ASGR1P07306 291 aa17.69■□□□□ 0.42
HPS4-216ENST00000493455 CCT6AP40227 531 aaKnown RBP17.69■□□□□ 0.42
HPS4-216ENST00000493455 EPHA7Q15375 998 aa17.69■□□□□ 0.42
HPS4-216ENST00000493455 UGCGQ16739 394 aa17.69■□□□□ 0.42
HPS4-216ENST00000493455 FAM160B1Q5W0V3 765 aa17.69■□□□□ 0.42
HPS4-216ENST00000493455 KRT79Q5XKE5 535 aa17.69■□□□□ 0.42
HPS4-216ENST00000493455 CXCL17Q6UXB2 119 aa17.69■□□□□ 0.42
HPS4-216ENST00000493455 ABHD15Q6UXT9 468 aa17.69■□□□□ 0.42
HPS4-216ENST00000493455 TPH2Q8IWU9 490 aa17.69■□□□□ 0.42
HPS4-216ENST00000493455 RGL1Q9NZL6 768 aa17.69■□□□□ 0.42
HPS4-216ENST00000493455 GOLGA6L4A6NEF3 574 aa17.68■□□□□ 0.42
HPS4-216ENST00000493455 LONP1P36776 959 aaKnown RBP17.68■□□□□ 0.42
HPS4-216ENST00000493455 STAT5BP51692 787 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms