RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, human

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS36-205	ENST00000492650	STYK1	Q6J9G0	422 aa		5.2	□□□□□ -1.58
VPS36-205	ENST00000492650	DPH6	Q7L8W6	267 aa		5.2	□□□□□ -1.58
VPS36-205	ENST00000492650	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	5.2	□□□□□ -1.58
VPS36-205	ENST00000492650	PROSER1	Q86XN7	944 aa		5.2	□□□□□ -1.58
VPS36-205	ENST00000492650	NUDT10	Q8NFP7	164 aa		5.2	□□□□□ -1.58
VPS36-205	ENST00000492650	UHMK1	Q8TAS1	419 aa	Known RBP	5.2	□□□□□ -1.58
VPS36-205	ENST00000492650	DVL3	Q92997	716 aa	Predicted RBP	5.2	□□□□□ -1.58
VPS36-205	ENST00000492650	NUDT11	Q96G61	164 aa		5.2	□□□□□ -1.58
VPS36-205	ENST00000492650	ALG1	Q9BT22	464 aa		5.2	□□□□□ -1.58
VPS36-205	ENST00000492650	C1QTNF3	Q9BXJ4	246 aa		5.2	□□□□□ -1.58
VPS36-205	ENST00000492650	PFKP	Q01813	784 aa		5.19	□□□□□ -1.58
VPS36-205	ENST00000492650	SKIDA1	Q1XH10	827 aa		5.19	□□□□□ -1.58
VPS36-205	ENST00000492650	PKN3	Q6P5Z2	889 aa		5.19	□□□□□ -1.58
VPS36-205	ENST00000492650	CIR1	Q86X95	450 aa	Predicted RBP	5.19	□□□□□ -1.58
VPS36-205	ENST00000492650	CKAP2L	Q8IYA6	745 aa		5.19	□□□□□ -1.58
VPS36-205	ENST00000492650	DTX3	Q8N9I9	347 aa		5.19	□□□□□ -1.58
VPS36-205	ENST00000492650	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
VPS36-205	ENST00000492650	KISS1R	Q969F8	398 aa	Predicted RBP	5.19	□□□□□ -1.58
VPS36-205	ENST00000492650	KRTAP3-1	Q9BYR8	98 aa		5.19	□□□□□ -1.58
VPS36-205	ENST00000492650	DEF6	Q9H4E7	631 aa		5.19	□□□□□ -1.58
VPS36-205	ENST00000492650	IPPK	Q9H8X2	491 aa		5.19	□□□□□ -1.58
VPS36-205	ENST00000492650	ARHGAP20	Q9P2F6	1191 aa		5.19	□□□□□ -1.58
VPS36-205	ENST00000492650	ZFP69B	Q9UJL9	534 aa		5.19	□□□□□ -1.58
VPS36-205	ENST00000492650	C1QTNF3-AMACR	E9PGA6	284 aa		5.18	□□□□□ -1.58
VPS36-205	ENST00000492650	COL6A1	P12109	1028 aa		5.18	□□□□□ -1.58
VPS36-205	ENST00000492650	TNFRSF1A	P19438	455 aa		5.18	□□□□□ -1.58
VPS36-205	ENST00000492650	ZXDA	P98168	799 aa		5.18	□□□□□ -1.58
VPS36-205	ENST00000492650	ICAM4	Q14773	271 aa		5.18	□□□□□ -1.58
VPS36-205	ENST00000492650	KCTD1	Q719H9	257 aa		5.18	□□□□□ -1.58
VPS36-205	ENST00000492650	STPG3	Q8N7X2	389 aa		5.18	□□□□□ -1.58
VPS36-205	ENST00000492650	CDC6	Q99741	560 aa		5.18	□□□□□ -1.58
VPS36-205	ENST00000492650	PTPN18	Q99952	460 aa		5.18	□□□□□ -1.58
VPS36-205	ENST00000492650	SPATA9	Q9BWV2	254 aa		5.18	□□□□□ -1.58
VPS36-205	ENST00000492650	ADAM29	Q9UKF5	820 aa		5.18	□□□□□ -1.58
VPS36-205	ENST00000492650	TRAF6	Q9Y4K3	522 aa		5.18	□□□□□ -1.58
VPS36-205	ENST00000492650	TELO2	Q9Y4R8	837 aa		5.18	□□□□□ -1.58
VPS36-205	ENST00000492650	ASXL2	Q76L83	1435 aa		5.17	□□□□□ -1.58
VPS36-205	ENST00000492650	CCDC85C	A6NKD9	419 aa		5.17	□□□□□ -1.58
VPS36-205	ENST00000492650	MATN3	O15232	486 aa		5.17	□□□□□ -1.58
VPS36-205	ENST00000492650	GPR42	O15529	346 aa		5.17	□□□□□ -1.58
VPS36-205	ENST00000492650	KLHL18	O94889	574 aa		5.17	□□□□□ -1.58
VPS36-205	ENST00000492650	KNG1	P01042	644 aa		5.17	□□□□□ -1.58
VPS36-205	ENST00000492650	EPHB4	P54760	987 aa		5.17	□□□□□ -1.58
VPS36-205	ENST00000492650	CD276	Q5ZPR3	534 aa		5.17	□□□□□ -1.58
VPS36-205	ENST00000492650	SLFN13	Q68D06	897 aa		5.17	□□□□□ -1.58
VPS36-205	ENST00000492650	ZNF585A	Q6P3V2	769 aa		5.17	□□□□□ -1.58
VPS36-205	ENST00000492650		Q6ZUG5	572 aa		5.17	□□□□□ -1.58
VPS36-205	ENST00000492650	RALYL	Q86SE5	291 aa	Known RBP	5.17	□□□□□ -1.58
VPS36-205	ENST00000492650	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	5.17	□□□□□ -1.58
VPS36-205	ENST00000492650	IPO9	Q96P70	1041 aa	Known RBP	5.17	□□□□□ -1.58
VPS36-205	ENST00000492650	CD244	Q9BZW8	370 aa		5.17	□□□□□ -1.58
VPS36-205	ENST00000492650	PDPK1	O15530	556 aa		5.16	□□□□□ -1.58
VPS36-205	ENST00000492650	CHGB	P05060	677 aa		5.16	□□□□□ -1.58
VPS36-205	ENST00000492650	EPHA5	P54756	1037 aa		5.16	□□□□□ -1.58
VPS36-205	ENST00000492650	PAK1	Q13153	545 aa		5.16	□□□□□ -1.58
VPS36-205	ENST00000492650	MTERF2	Q49AM1	385 aa		5.16	□□□□□ -1.58
VPS36-205	ENST00000492650	HABP4	Q5JVS0	413 aa	Known RBP	5.16	□□□□□ -1.58
VPS36-205	ENST00000492650	BTBD8	Q5XKL5	378 aa		5.16	□□□□□ -1.58
VPS36-205	ENST00000492650	EP400NL	Q6ZTU2	488 aa		5.16	□□□□□ -1.58
VPS36-205	ENST00000492650	SPATC1	Q76KD6	591 aa		5.16	□□□□□ -1.58
VPS36-205	ENST00000492650	GPR155	Q7Z3F1	870 aa		5.16	□□□□□ -1.58
VPS36-205	ENST00000492650	SPRED1	Q7Z699	444 aa		5.16	□□□□□ -1.58
VPS36-205	ENST00000492650	MTDH	Q86UE4	582 aa	Known RBP	5.16	□□□□□ -1.58
VPS36-205	ENST00000492650	SCUBE1	Q8IWY4	988 aa		5.16	□□□□□ -1.58
VPS36-205	ENST00000492650	PALM2	Q8IXS6	379 aa		5.16	□□□□□ -1.58
VPS36-205	ENST00000492650	ZNF669	Q96BR6	464 aa	Predicted RBP	5.16	□□□□□ -1.58
VPS36-205	ENST00000492650	CDK5RAP1	Q96SZ6	601 aa	Known RBP	5.16	□□□□□ -1.58
VPS36-205	ENST00000492650	TACO1	Q9BSH4	297 aa	Known RBP	5.16	□□□□□ -1.58
VPS36-205	ENST00000492650	KLC2	Q9H0B6	622 aa		5.16	□□□□□ -1.58
VPS36-205	ENST00000492650	CATSPERZ	Q9NTU4	200 aa		5.16	□□□□□ -1.58
VPS36-205	ENST00000492650	PFDN2	Q9UHV9	154 aa		5.16	□□□□□ -1.58
VPS36-205	ENST00000492650	ZNF839	A8K0R7	811 aa		5.15	□□□□□ -1.59
VPS36-205	ENST00000492650		H0Y858	1186 aa		5.15	□□□□□ -1.59
VPS36-205	ENST00000492650	ACOT7	O00154	380 aa		5.15	□□□□□ -1.59
VPS36-205	ENST00000492650	AQP7	O14520	342 aa		5.15	□□□□□ -1.59
VPS36-205	ENST00000492650	FSHB	P01225	129 aa		5.15	□□□□□ -1.59
VPS36-205	ENST00000492650	IFNL2	Q8IZJ0	200 aa		5.15	□□□□□ -1.59
VPS36-205	ENST00000492650	NLGN4X	Q8N0W4	816 aa		5.15	□□□□□ -1.59
VPS36-205	ENST00000492650	PTPRN2	Q92932	1015 aa		5.15	□□□□□ -1.59
VPS36-205	ENST00000492650	KRTAP9-8	Q9BYQ0	159 aa		5.15	□□□□□ -1.59
VPS36-205	ENST00000492650	PDGFD	Q9GZP0	370 aa	Predicted RBP	5.15	□□□□□ -1.59
VPS36-205	ENST00000492650	SLC39A2	Q9NP94	309 aa		5.15	□□□□□ -1.59
VPS36-205	ENST00000492650	KCND1	Q9NSA2	647 aa		5.15	□□□□□ -1.59
VPS36-205	ENST00000492650	RIC8B	Q9NVN3	520 aa		5.15	□□□□□ -1.59
VPS36-205	ENST00000492650	TSC22D4	Q9Y3Q8	395 aa		5.15	□□□□□ -1.59
VPS36-205	ENST00000492650	TCAF1	Q9Y4C2	921 aa		5.15	□□□□□ -1.59
VPS36-205	ENST00000492650	PCDHA8	Q9Y5H6	950 aa		5.15	□□□□□ -1.59
VPS36-205	ENST00000492650		E9PSI1	815 aa		5.14	□□□□□ -1.59
VPS36-205	ENST00000492650	ZNF623	O75123	536 aa		5.14	□□□□□ -1.59
VPS36-205	ENST00000492650	IL18BP	O95998	194 aa		5.14	□□□□□ -1.59
VPS36-205	ENST00000492650	ZC3H6	P61129	1189 aa	Known RBP	5.14	□□□□□ -1.59
VPS36-205	ENST00000492650	ST5	P78524	1137 aa		5.14	□□□□□ -1.59
VPS36-205	ENST00000492650	SSRP1	Q08945	709 aa	Known RBP	5.14	□□□□□ -1.59
VPS36-205	ENST00000492650	FAM209A	Q5JX71	171 aa		5.14	□□□□□ -1.59
VPS36-205	ENST00000492650	ARHGAP36	Q6ZRI8	547 aa		5.14	□□□□□ -1.59
VPS36-205	ENST00000492650	MAMDC2	Q7Z304	686 aa	Predicted RBP	5.14	□□□□□ -1.59
VPS36-205	ENST00000492650	SH3RF2	Q8TEC5	729 aa		5.14	□□□□□ -1.59
VPS36-205	ENST00000492650	FBXW5	Q969U6	566 aa		5.14	□□□□□ -1.59
VPS36-205	ENST00000492650	AJUBA	Q96IF1	538 aa		5.14	□□□□□ -1.59
VPS36-205	ENST00000492650	CD248	Q9HCU0	757 aa		5.14	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms