RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 GJA10Q969M2 543 aa21.87■■□□□ 1.09
PCOLCE-208ENST00000487172 VAV3Q9UKW4 847 aa21.87■■□□□ 1.09
PCOLCE-208ENST00000487172 PCDHA12Q9UN75 941 aa21.87■■□□□ 1.09
PCOLCE-208ENST00000487172 TELO2Q9Y4R8 837 aa21.87■■□□□ 1.09
PCOLCE-208ENST00000487172 CENPFP49454 3210 aa21.86■■□□□ 1.09
PCOLCE-208ENST00000487172 IGKV6D-21A0A0A0MT36 114 aa21.86■■□□□ 1.09
PCOLCE-208ENST00000487172 MYL3P08590 195 aa21.86■■□□□ 1.09
PCOLCE-208ENST00000487172 OR52Z1P0C646 297 aa21.86■■□□□ 1.09
PCOLCE-208ENST00000487172 SFNP31947 248 aa21.86■■□□□ 1.09
PCOLCE-208ENST00000487172 TCF7P36402 384 aaPredicted RBP21.86■■□□□ 1.09
PCOLCE-208ENST00000487172 SOX10P56693 466 aa21.86■■□□□ 1.09
PCOLCE-208ENST00000487172 SP4Q02446 784 aa21.86■■□□□ 1.09
PCOLCE-208ENST00000487172 NECAB2Q7Z6G3 386 aa21.86■■□□□ 1.09
PCOLCE-208ENST00000487172 MTG1Q9BT17 334 aaPredicted RBP21.86■■□□□ 1.09
PCOLCE-208ENST00000487172 UNC45AQ9H3U1 944 aa21.86■■□□□ 1.09
PCOLCE-208ENST00000487172 TTC12Q9H892 705 aaPredicted RBP21.86■■□□□ 1.09
PCOLCE-208ENST00000487172 CIZ1Q9ULV3 898 aaPredicted RBP21.86■■□□□ 1.09
PCOLCE-208ENST00000487172 CEP131Q9UPN4 1083 aa21.86■■□□□ 1.09
PCOLCE-208ENST00000487172 MYH15Q9Y2K3 1946 aa21.85■■□□□ 1.09
PCOLCE-208ENST00000487172 WDR64B1ANS9 1081 aa21.85■■□□□ 1.09
PCOLCE-208ENST00000487172 LGR5O75473 907 aa21.85■■□□□ 1.09
PCOLCE-208ENST00000487172 PRPHP41219 470 aa21.85■■□□□ 1.09
PCOLCE-208ENST00000487172 TXKP42681 527 aa21.85■■□□□ 1.09
PCOLCE-208ENST00000487172 JAK3P52333 1124 aa21.85■■□□□ 1.09
PCOLCE-208ENST00000487172 ATP2C1P98194 919 aaPredicted RBP21.85■■□□□ 1.09
PCOLCE-208ENST00000487172 SF3A1Q15459 793 aaKnown RBP21.85■■□□□ 1.09
PCOLCE-208ENST00000487172 FOXD4L5Q5VV16 416 aaPredicted RBP21.85■■□□□ 1.09
PCOLCE-208ENST00000487172 ATL3Q6DD88 541 aa21.85■■□□□ 1.09
PCOLCE-208ENST00000487172 CXCL17Q6UXB2 119 aa21.85■■□□□ 1.09
PCOLCE-208ENST00000487172 FOXD4L4Q8WXT5 416 aaPredicted RBP21.85■■□□□ 1.09
PCOLCE-208ENST00000487172 PAWRQ96IZ0 340 aaKnown RBP21.85■■□□□ 1.09
PCOLCE-208ENST00000487172 GLT1D1Q96MS3 346 aa21.85■■□□□ 1.09
PCOLCE-208ENST00000487172 ZNF396Q96N95 335 aaPredicted RBP21.85■■□□□ 1.09
PCOLCE-208ENST00000487172 C16orf70Q9BSU1 422 aa21.85■■□□□ 1.09
PCOLCE-208ENST00000487172 PCDHA10Q9Y5I2 948 aa21.85■■□□□ 1.09
PCOLCE-208ENST00000487172 EMSYQ7Z589 1322 aa21.84■■□□□ 1.09
PCOLCE-208ENST00000487172 A0A1W2PQ45 241 aaPredicted RBP21.84■■□□□ 1.09
PCOLCE-208ENST00000487172 A0A1W2PQY0 241 aa21.84■■□□□ 1.09
PCOLCE-208ENST00000487172 LGALS2P05162 132 aa21.84■■□□□ 1.09
PCOLCE-208ENST00000487172 SUPT20HL2P0C7V6 817 aa21.84■■□□□ 1.09
PCOLCE-208ENST00000487172 SPIRE1Q08AE8 756 aa21.84■■□□□ 1.09
PCOLCE-208ENST00000487172 ARL6IP4Q66PJ3 421 aaKnown RBP21.84■■□□□ 1.09
PCOLCE-208ENST00000487172 MIS18BP1Q6P0N0 1132 aa21.84■■□□□ 1.09
PCOLCE-208ENST00000487172 DIS3LQ8TF46 1054 aaKnown RBP21.84■■□□□ 1.09
PCOLCE-208ENST00000487172 KAT2BQ92831 832 aa21.84■■□□□ 1.09
PCOLCE-208ENST00000487172 IPO9Q96P70 1041 aaKnown RBP21.84■■□□□ 1.09
PCOLCE-208ENST00000487172 C11orf49Q9H6J7 331 aa21.84■■□□□ 1.09
PCOLCE-208ENST00000487172 DISC1Q9NRI5 854 aa21.84■■□□□ 1.09
PCOLCE-208ENST00000487172 MORC2Q9Y6X9 1032 aaPredicted RBP21.84■■□□□ 1.09
PCOLCE-208ENST00000487172 HAS3O00219 553 aa21.83■■□□□ 1.09
PCOLCE-208ENST00000487172 F2P00734 622 aa21.83■■□□□ 1.09
PCOLCE-208ENST00000487172 PSAPP07602 524 aa21.83■■□□□ 1.09
PCOLCE-208ENST00000487172 PLPPR4Q7Z2D5 763 aa21.83■■□□□ 1.09
PCOLCE-208ENST00000487172 MIER3Q7Z3K6 550 aa21.83■■□□□ 1.09
PCOLCE-208ENST00000487172 USP28Q96RU2 1077 aa21.83■■□□□ 1.09
PCOLCE-208ENST00000487172 PCYT2Q99447 389 aa21.83■■□□□ 1.09
PCOLCE-208ENST00000487172 KATNAL1Q9BW62 490 aa21.83■■□□□ 1.09
PCOLCE-208ENST00000487172 SEZ6LQ9BYH1 1024 aa21.83■■□□□ 1.09
PCOLCE-208ENST00000487172 SENP6Q9GZR1 1112 aaPredicted RBP21.83■■□□□ 1.09
PCOLCE-208ENST00000487172 SMARCAD1Q9H4L7 1026 aa21.83■■□□□ 1.09
PCOLCE-208ENST00000487172 STARD7Q9NQZ5 370 aa21.83■■□□□ 1.09
PCOLCE-208ENST00000487172 CLIC4Q9Y696 253 aa21.83■■□□□ 1.09
PCOLCE-208ENST00000487172 SCN10AQ9Y5Y9 1956 aa21.82■■□□□ 1.08
PCOLCE-208ENST00000487172 FXR2P51116 673 aaKnown RBP eCLIP21.82■■□□□ 1.08
PCOLCE-208ENST00000487172 PDIA5Q14554 519 aa21.82■■□□□ 1.08
PCOLCE-208ENST00000487172 PTPAQ15257 358 aa21.82■■□□□ 1.08
PCOLCE-208ENST00000487172 EPHA7Q15375 998 aa21.82■■□□□ 1.08
PCOLCE-208ENST00000487172 AFAP1L1Q8TED9 768 aa21.82■■□□□ 1.08
PCOLCE-208ENST00000487172 FERMT2Q96AC1 680 aa21.82■■□□□ 1.08
PCOLCE-208ENST00000487172 ATP6V1DQ9Y5K8 247 aa21.82■■□□□ 1.08
PCOLCE-208ENST00000487172 H3BRB1 525 aa21.81■■□□□ 1.08
PCOLCE-208ENST00000487172 CHMP2AO43633 222 aa21.81■■□□□ 1.08
PCOLCE-208ENST00000487172 ZNF286BP0CG31 522 aa21.81■■□□□ 1.08
PCOLCE-208ENST00000487172 NASPP49321 788 aaPredicted RBP21.81■■□□□ 1.08
PCOLCE-208ENST00000487172 SLC26A2P50443 739 aa21.81■■□□□ 1.08
PCOLCE-208ENST00000487172 STAT5BP51692 787 aa21.81■■□□□ 1.08
PCOLCE-208ENST00000487172 TMEM266Q2M3C6 531 aa21.81■■□□□ 1.08
PCOLCE-208ENST00000487172 UTP14CQ5TAP6 766 aaKnown RBP21.81■■□□□ 1.08
PCOLCE-208ENST00000487172 C1orf53Q5VUE5 145 aa21.81■■□□□ 1.08
PCOLCE-208ENST00000487172 FAM160B1Q5W0V3 765 aa21.81■■□□□ 1.08
PCOLCE-208ENST00000487172 DTHD1Q6ZMT9 781 aa21.81■■□□□ 1.08
PCOLCE-208ENST00000487172 SLC43A3Q8NBI5 491 aa21.81■■□□□ 1.08
PCOLCE-208ENST00000487172 TUT1Q9H6E5 874 aaKnown RBP21.81■■□□□ 1.08
PCOLCE-208ENST00000487172 AZI2Q9H6S1 392 aa21.81■■□□□ 1.08
PCOLCE-208ENST00000487172 ERAP1Q9NZ08 941 aa21.81■■□□□ 1.08
PCOLCE-208ENST00000487172 ZNF215Q9UL58 517 aaPredicted RBP21.81■■□□□ 1.08
PCOLCE-208ENST00000487172 SAMM50Q9Y512 469 aa21.81■■□□□ 1.08
PCOLCE-208ENST00000487172 EML1O00423 815 aa21.8■■□□□ 1.08
PCOLCE-208ENST00000487172 TECP42680 631 aa21.8■■□□□ 1.08
PCOLCE-208ENST00000487172 PSEN2P49810 448 aa21.8■■□□□ 1.08
PCOLCE-208ENST00000487172 SNX17Q15036 470 aa21.8■■□□□ 1.08
PCOLCE-208ENST00000487172 SLC39A14Q15043 492 aa21.8■■□□□ 1.08
PCOLCE-208ENST00000487172 SWSAP1Q6NVH7 229 aa21.8■■□□□ 1.08
PCOLCE-208ENST00000487172 SLC39A5Q6ZMH5 540 aa21.8■■□□□ 1.08
PCOLCE-208ENST00000487172 CCDC60Q8IWA6 550 aaPredicted RBP21.8■■□□□ 1.08
PCOLCE-208ENST00000487172 IGSF22Q8N9C0 903 aa21.8■■□□□ 1.08
PCOLCE-208ENST00000487172 RAB34Q9BZG1 259 aa21.8■■□□□ 1.08
PCOLCE-208ENST00000487172 FTOQ9C0B1 505 aaKnown RBP eCLIP21.8■■□□□ 1.08
PCOLCE-208ENST00000487172 ZNF302Q9NR11 478 aa21.8■■□□□ 1.08
PCOLCE-208ENST00000487172 CFAP45Q9UL16 551 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms