RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 TELO2Q9Y4R8 837 aa18.03■□□□□ 0.48
UPF3A-208ENST00000484246 IGKV6D-21A0A0A0MT36 114 aa18.02■□□□□ 0.48
UPF3A-208ENST00000484246 H3BRB1 525 aa18.02■□□□□ 0.48
UPF3A-208ENST00000484246 TDP2O95551 362 aa18.02■□□□□ 0.48
UPF3A-208ENST00000484246 BMP8BP34820 402 aa18.02■□□□□ 0.48
UPF3A-208ENST00000484246 TCF7P36402 384 aaPredicted RBP18.02■□□□□ 0.48
UPF3A-208ENST00000484246 ACTR2P61160 394 aa18.02■□□□□ 0.48
UPF3A-208ENST00000484246 SAFBQ15424 915 aaKnown RBP eCLIP18.02■□□□□ 0.48
UPF3A-208ENST00000484246 KIAA0753Q2KHM9 967 aa18.02■□□□□ 0.48
UPF3A-208ENST00000484246 EARS2Q5JPH6 523 aaKnown RBP18.02■□□□□ 0.48
UPF3A-208ENST00000484246 ZNF746Q6NUN9 644 aaPredicted RBP18.02■□□□□ 0.48
UPF3A-208ENST00000484246 PIK3AP1Q6ZUJ8 805 aa18.02■□□□□ 0.48
UPF3A-208ENST00000484246 SH3RF1Q7Z6J0 888 aa18.02■□□□□ 0.48
UPF3A-208ENST00000484246 SLC5A5Q92911 643 aa18.02■□□□□ 0.48
UPF3A-208ENST00000484246 FOXP1Q9H334 677 aaPredicted RBP18.02■□□□□ 0.48
UPF3A-208ENST00000484246 TUT1Q9H6E5 874 aaKnown RBP18.02■□□□□ 0.48
UPF3A-208ENST00000484246 TMEM39AQ9NV64 488 aa18.02■□□□□ 0.48
UPF3A-208ENST00000484246 PKD2L1Q9P0L9 805 aa18.02■□□□□ 0.48
UPF3A-208ENST00000484246 BTBD18B2RXH4 712 aa18.01■□□□□ 0.47
UPF3A-208ENST00000484246 MSH4O15457 936 aa18.01■□□□□ 0.47
UPF3A-208ENST00000484246 CCNE2O96020 404 aa18.01■□□□□ 0.47
UPF3A-208ENST00000484246 SYN1P17600 705 aa18.01■□□□□ 0.47
UPF3A-208ENST00000484246 KRT76Q01546 638 aa18.01■□□□□ 0.47
UPF3A-208ENST00000484246 TRIM50Q86XT4 487 aa18.01■□□□□ 0.47
UPF3A-208ENST00000484246 SMAP1Q8IYB5 467 aaPredicted RBP18.01■□□□□ 0.47
UPF3A-208ENST00000484246 ETNPPLQ8TBG4 499 aa18.01■□□□□ 0.47
UPF3A-208ENST00000484246 SNX21Q969T3 373 aa18.01■□□□□ 0.47
UPF3A-208ENST00000484246 TRPV6Q9H1D0 765 aa18.01■□□□□ 0.47
UPF3A-208ENST00000484246 PRDM5Q9NQX1 630 aaPredicted RBP18.01■□□□□ 0.47
UPF3A-208ENST00000484246 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.01■□□□□ 0.47
UPF3A-208ENST00000484246 TBX3O15119 743 aa18■□□□□ 0.47
UPF3A-208ENST00000484246 MAGEA10P43363 369 aaPredicted RBP18■□□□□ 0.47
UPF3A-208ENST00000484246 SLC26A2P50443 739 aa18■□□□□ 0.47
UPF3A-208ENST00000484246 SP4Q02446 784 aa18■□□□□ 0.47
UPF3A-208ENST00000484246 RBL2Q08999 1139 aa18■□□□□ 0.47
UPF3A-208ENST00000484246 FAM47CQ5HY64 1035 aa18■□□□□ 0.47
UPF3A-208ENST00000484246 B3GNT9Q6UX72 402 aa18■□□□□ 0.47
UPF3A-208ENST00000484246 C7orf31Q8N865 590 aa18■□□□□ 0.47
UPF3A-208ENST00000484246 CTAGE1Q96RT6 745 aa18■□□□□ 0.47
UPF3A-208ENST00000484246 PCYT2Q99447 389 aa18■□□□□ 0.47
UPF3A-208ENST00000484246 NOC4LQ9BVI4 516 aaKnown RBP18■□□□□ 0.47
UPF3A-208ENST00000484246 SMARCAD1Q9H4L7 1026 aa18■□□□□ 0.47
UPF3A-208ENST00000484246 KCNMB3Q9NPA1 279 aa18■□□□□ 0.47
UPF3A-208ENST00000484246 TRMT13Q9NUP7 481 aaKnown RBP18■□□□□ 0.47
UPF3A-208ENST00000484246 ERAP1Q9NZ08 941 aa18■□□□□ 0.47
UPF3A-208ENST00000484246 DDX25Q9UHL0 483 aaKnown RBP18■□□□□ 0.47
UPF3A-208ENST00000484246 A0A1W2PPC1 479 aa17.99■□□□□ 0.47
UPF3A-208ENST00000484246 FAM205CA6NFA0 338 aa17.99■□□□□ 0.47
UPF3A-208ENST00000484246 SLC37A4O43826 429 aa17.99■□□□□ 0.47
UPF3A-208ENST00000484246 PSMD10O75832 226 aa17.99■□□□□ 0.47
UPF3A-208ENST00000484246 TIMP1P01033 207 aa17.99■□□□□ 0.47
UPF3A-208ENST00000484246 ITGB8P26012 769 aa17.99■□□□□ 0.47
UPF3A-208ENST00000484246 LETM2Q2VYF4 491 aa17.99■□□□□ 0.47
UPF3A-208ENST00000484246 GDF6Q6KF10 455 aaPredicted RBP17.99■□□□□ 0.47
UPF3A-208ENST00000484246 ABHD15Q6UXT9 468 aa17.99■□□□□ 0.47
UPF3A-208ENST00000484246 PLPPR4Q7Z2D5 763 aa17.99■□□□□ 0.47
UPF3A-208ENST00000484246 RDM1Q8NG50 284 aa17.99■□□□□ 0.47
UPF3A-208ENST00000484246 AFAP1L1Q8TED9 768 aa17.99■□□□□ 0.47
UPF3A-208ENST00000484246 LBHD1Q9BQE6 289 aaPredicted RBP17.99■□□□□ 0.47
UPF3A-208ENST00000484246 HDAC6Q9UBN7 1215 aa17.99■□□□□ 0.47
UPF3A-208ENST00000484246 LTBP2Q14767 1821 aa17.99■□□□□ 0.47
UPF3A-208ENST00000484246 PITPNM1O00562 1244 aa17.98■□□□□ 0.47
UPF3A-208ENST00000484246 RAG1P15918 1043 aa17.98■□□□□ 0.47
UPF3A-208ENST00000484246 FOSBP53539 338 aa17.98■□□□□ 0.47
UPF3A-208ENST00000484246 GUCY1B3Q02153 619 aa17.98■□□□□ 0.47
UPF3A-208ENST00000484246 ORC2Q13416 577 aaPredicted RBP17.98■□□□□ 0.47
UPF3A-208ENST00000484246 INTS4Q96HW7 963 aaKnown RBP17.98■□□□□ 0.47
UPF3A-208ENST00000484246 FAM20AQ96MK3 541 aa17.98■□□□□ 0.47
UPF3A-208ENST00000484246 HIPK3Q9H422 1215 aa17.98■□□□□ 0.47
UPF3A-208ENST00000484246 TCEAL9Q9UHQ7 104 aa17.98■□□□□ 0.47
UPF3A-208ENST00000484246 MYH7BA7E2Y1 1941 aa17.98■□□□□ 0.47
UPF3A-208ENST00000484246 WDR64B1ANS9 1081 aa17.97■□□□□ 0.47
UPF3A-208ENST00000484246 K7ELQ4 463 aaPredicted RBP17.97■□□□□ 0.47
UPF3A-208ENST00000484246 GAS7O60861 476 aa17.97■□□□□ 0.47
UPF3A-208ENST00000484246 SMIM10L2AP0DMW4 78 aa17.97■□□□□ 0.47
UPF3A-208ENST00000484246 SMIM10L2BP0DMW5 78 aa17.97■□□□□ 0.47
UPF3A-208ENST00000484246 U2AF2P26368 475 aaKnown RBP eCLIP17.97■□□□□ 0.471e-6■□□□□ 9.6
UPF3A-208ENST00000484246 GJB2P29033 226 aa17.97■□□□□ 0.47
UPF3A-208ENST00000484246 SFNP31947 248 aa17.97■□□□□ 0.47
UPF3A-208ENST00000484246 TRAPPC10P48553 1259 aa17.97■□□□□ 0.47
UPF3A-208ENST00000484246 ADAM17P78536 824 aa17.97■□□□□ 0.47
UPF3A-208ENST00000484246 PTGISQ16647 500 aa17.97■□□□□ 0.47
UPF3A-208ENST00000484246 UTP14CQ5TAP6 766 aaKnown RBP17.97■□□□□ 0.47
UPF3A-208ENST00000484246 LRCH2Q5VUJ6 765 aa17.97■□□□□ 0.47
UPF3A-208ENST00000484246 MFSD5Q6N075 450 aa17.97■□□□□ 0.47
UPF3A-208ENST00000484246 MIS18BP1Q6P0N0 1132 aa17.97■□□□□ 0.47
UPF3A-208ENST00000484246 CHRDL2Q6WN34 429 aa17.97■□□□□ 0.47
UPF3A-208ENST00000484246 NOSTRINQ8IVI9 506 aa17.97■□□□□ 0.47
UPF3A-208ENST00000484246 CAGE1Q8TC20 777 aa17.97■□□□□ 0.47
UPF3A-208ENST00000484246 TEKT3Q9BXF9 490 aa17.97■□□□□ 0.47
UPF3A-208ENST00000484246 AZI2Q9H6S1 392 aa17.97■□□□□ 0.47
UPF3A-208ENST00000484246 SMC3Q9UQE7 1217 aa17.97■□□□□ 0.47
UPF3A-208ENST00000484246 NRCAMQ92823 1304 aa17.97■□□□□ 0.47
UPF3A-208ENST00000484246 CCNT1O60563 726 aaKnown RBP17.96■□□□□ 0.47
UPF3A-208ENST00000484246 JAK3P52333 1124 aa17.96■□□□□ 0.47
UPF3A-208ENST00000484246 PTK7Q13308 1070 aa17.96■□□□□ 0.47
UPF3A-208ENST00000484246 HIC1Q14526 733 aa17.96■□□□□ 0.47
UPF3A-208ENST00000484246 SERINC5Q86VE9 423 aa17.96■□□□□ 0.47
UPF3A-208ENST00000484246 CCDC60Q8IWA6 550 aaPredicted RBP17.96■□□□□ 0.47
UPF3A-208ENST00000484246 GLG1Q92896 1179 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms