RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 NBPF20Q3BBV1 942 aa12.25□□□□□ -0.45
ATG4B-219ENST00000479941 LRCH2Q5VUJ6 765 aa12.25□□□□□ -0.45
ATG4B-219ENST00000479941 ZNF746Q6NUN9 644 aaPredicted RBP12.25□□□□□ -0.45
ATG4B-219ENST00000479941 SMAP1Q8IYB5 467 aaPredicted RBP12.25□□□□□ -0.45
ATG4B-219ENST00000479941 C7orf61Q8IZ16 206 aa12.25□□□□□ -0.45
ATG4B-219ENST00000479941 ETNPPLQ8TBG4 499 aa12.25□□□□□ -0.45
ATG4B-219ENST00000479941 FAM20AQ96MK3 541 aa12.25□□□□□ -0.45
ATG4B-219ENST00000479941 TUT1Q9H6E5 874 aaKnown RBP12.25□□□□□ -0.45
ATG4B-219ENST00000479941 AZI2Q9H6S1 392 aa12.25□□□□□ -0.45
ATG4B-219ENST00000479941 ZNF215Q9UL58 517 aaPredicted RBP12.25□□□□□ -0.45
ATG4B-219ENST00000479941 NOL7Q9UMY1 257 aaKnown RBP12.25□□□□□ -0.45
ATG4B-219ENST00000479941 TELO2Q9Y4R8 837 aa12.25□□□□□ -0.45
ATG4B-219ENST00000479941 SCN10AQ9Y5Y9 1956 aa12.25□□□□□ -0.45
ATG4B-219ENST00000479941 DDX39AO00148 427 aaKnown RBP12.24□□□□□ -0.45
ATG4B-219ENST00000479941 MARCH6O60337 910 aa12.24□□□□□ -0.45
ATG4B-219ENST00000479941 GAS7O60861 476 aa12.24□□□□□ -0.45
ATG4B-219ENST00000479941 PSMD10O75832 226 aa12.24□□□□□ -0.45
ATG4B-219ENST00000479941 CCNE2O96020 404 aa12.24□□□□□ -0.45
ATG4B-219ENST00000479941 KIAA0753Q2KHM9 967 aa12.24□□□□□ -0.45
ATG4B-219ENST00000479941 UTP14CQ5TAP6 766 aaKnown RBP12.24□□□□□ -0.45
ATG4B-219ENST00000479941 MCTP1Q6DN14 999 aa12.24□□□□□ -0.45
ATG4B-219ENST00000479941 ABHD15Q6UXT9 468 aa12.24□□□□□ -0.45
ATG4B-219ENST00000479941 EMSYQ7Z589 1322 aa12.24□□□□□ -0.45
ATG4B-219ENST00000479941 SESTD1Q86VW0 696 aa12.24□□□□□ -0.45
ATG4B-219ENST00000479941 FAM126BQ8IXS8 530 aa12.24□□□□□ -0.45
ATG4B-219ENST00000479941 SLFN12Q8IYM2 578 aa12.24□□□□□ -0.45
ATG4B-219ENST00000479941 C7orf31Q8N865 590 aa12.24□□□□□ -0.45
ATG4B-219ENST00000479941 GLG1Q92896 1179 aa12.24□□□□□ -0.45
ATG4B-219ENST00000479941 TEKT3Q9BXF9 490 aa12.24□□□□□ -0.45
ATG4B-219ENST00000479941 SMARCAD1Q9H4L7 1026 aa12.24□□□□□ -0.45
ATG4B-219ENST00000479941 KCNMB3Q9NPA1 279 aa12.24□□□□□ -0.45
ATG4B-219ENST00000479941 ERAP1Q9NZ08 941 aa12.24□□□□□ -0.45
ATG4B-219ENST00000479941 PRKAG2Q9UGJ0 569 aa12.24□□□□□ -0.45
ATG4B-219ENST00000479941 PCDHA10Q9Y5I2 948 aa12.24□□□□□ -0.45
ATG4B-219ENST00000479941 DOCK5Q9H7D0 1870 aa12.23□□□□□ -0.45
ATG4B-219ENST00000479941 IGKV6D-21A0A0A0MT36 114 aa12.23□□□□□ -0.45
ATG4B-219ENST00000479941 WDR64B1ANS9 1081 aa12.23□□□□□ -0.45
ATG4B-219ENST00000479941 NEMFO60524 1076 aa12.23□□□□□ -0.45
ATG4B-219ENST00000479941 LGR5O75473 907 aa12.23□□□□□ -0.45
ATG4B-219ENST00000479941 BAG4O95429 457 aaKnown RBP12.23□□□□□ -0.45
ATG4B-219ENST00000479941 CLTBP09497 229 aa12.23□□□□□ -0.45
ATG4B-219ENST00000479941 SUPT20HL2P0C7V6 817 aa12.23□□□□□ -0.45
ATG4B-219ENST00000479941 PDIA4P13667 645 aaKnown RBP12.23□□□□□ -0.45
ATG4B-219ENST00000479941 ATP2B1P20020 1258 aa12.23□□□□□ -0.45
ATG4B-219ENST00000479941 SYT1P21579 422 aa12.23□□□□□ -0.45
ATG4B-219ENST00000479941 SFNP31947 248 aa12.23□□□□□ -0.45
ATG4B-219ENST00000479941 SLC26A2P50443 739 aa12.23□□□□□ -0.45
ATG4B-219ENST00000479941 STAT5BP51692 787 aa12.23□□□□□ -0.45
ATG4B-219ENST00000479941 JAK3P52333 1124 aa12.23□□□□□ -0.45
ATG4B-219ENST00000479941 CHMP4BP1P59074 171 aa12.23□□□□□ -0.45
ATG4B-219ENST00000479941 FAAP100Q0VG06 881 aa12.23□□□□□ -0.45
ATG4B-219ENST00000479941 RILPL1Q5EBL4 403 aa12.23□□□□□ -0.45
ATG4B-219ENST00000479941 FAM47CQ5HY64 1035 aa12.23□□□□□ -0.45
ATG4B-219ENST00000479941 MIS18BP1Q6P0N0 1132 aa12.23□□□□□ -0.45
ATG4B-219ENST00000479941 PLPPR4Q7Z2D5 763 aa12.23□□□□□ -0.45
ATG4B-219ENST00000479941 POTEDQ86YR6 584 aa12.23□□□□□ -0.45
ATG4B-219ENST00000479941 RDM1Q8NG50 284 aa12.23□□□□□ -0.45
ATG4B-219ENST00000479941 TNPO1Q92973 898 aaKnown RBP12.23□□□□□ -0.45
ATG4B-219ENST00000479941 UIMC1Q96RL1 719 aa12.23□□□□□ -0.45
ATG4B-219ENST00000479941 FOXD4L1Q9NU39 408 aa12.23□□□□□ -0.45
ATG4B-219ENST00000479941 SAMM50Q9Y512 469 aa12.23□□□□□ -0.45
ATG4B-219ENST00000479941 ALPK3Q96L96 1907 aa12.23□□□□□ -0.45
ATG4B-219ENST00000479941 VPS37CA5D8V6 355 aaPredicted RBP12.22□□□□□ -0.45
ATG4B-219ENST00000479941 BACH1O14867 736 aa12.22□□□□□ -0.45
ATG4B-219ENST00000479941 CD4P01730 458 aa12.22□□□□□ -0.45
ATG4B-219ENST00000479941 PSAPP07602 524 aa12.22□□□□□ -0.45
ATG4B-219ENST00000479941 BECN1Q14457 450 aa12.22□□□□□ -0.45
ATG4B-219ENST00000479941 CALCRLQ16602 461 aa12.22□□□□□ -0.45
ATG4B-219ENST00000479941 TTC38Q5R3I4 469 aa12.22□□□□□ -0.45
ATG4B-219ENST00000479941 FAM160B1Q5W0V3 765 aa12.22□□□□□ -0.45
ATG4B-219ENST00000479941 B3GNT9Q6UX72 402 aa12.22□□□□□ -0.45
ATG4B-219ENST00000479941 BRAPQ7Z569 592 aa12.22□□□□□ -0.45
ATG4B-219ENST00000479941 TRIM50Q86XT4 487 aa12.22□□□□□ -0.45
ATG4B-219ENST00000479941 AFAP1L1Q8TED9 768 aa12.22□□□□□ -0.45
ATG4B-219ENST00000479941 HAS1Q92839 578 aa12.22□□□□□ -0.45
ATG4B-219ENST00000479941 GJA10Q969M2 543 aa12.22□□□□□ -0.45
ATG4B-219ENST00000479941 PCYT2Q99447 389 aa12.22□□□□□ -0.45
ATG4B-219ENST00000479941 ZNF302Q9NR11 478 aa12.22□□□□□ -0.45
ATG4B-219ENST00000479941 PDLIM7Q9NR12 457 aa12.22□□□□□ -0.45
ATG4B-219ENST00000479941 DISC1Q9NRI5 854 aa12.22□□□□□ -0.45
ATG4B-219ENST00000479941 TMEM39AQ9NV64 488 aa12.22□□□□□ -0.45
ATG4B-219ENST00000479941 HDAC6Q9UBN7 1215 aa12.22□□□□□ -0.45
ATG4B-219ENST00000479941 GTF2IRD1Q9UHL9 959 aa12.22□□□□□ -0.45
ATG4B-219ENST00000479941 RANBP2P49792 3224 aaKnown RBP12.22□□□□□ -0.45
ATG4B-219ENST00000479941 WNT7AO00755 349 aa12.21□□□□□ -0.45
ATG4B-219ENST00000479941 CHMP2AO43633 222 aa12.21□□□□□ -0.45
ATG4B-219ENST00000479941 B4GALT4O60513 344 aa12.21□□□□□ -0.45
ATG4B-219ENST00000479941 MCM7P33993 719 aa12.21□□□□□ -0.45
ATG4B-219ENST00000479941 TOB1P50616 345 aaPredicted RBP12.21□□□□□ -0.45
ATG4B-219ENST00000479941 PPP2R5CQ13362 524 aa12.21□□□□□ -0.45
ATG4B-219ENST00000479941 SWSAP1Q6NVH7 229 aa12.21□□□□□ -0.45
ATG4B-219ENST00000479941 MIER3Q7Z3K6 550 aa12.21□□□□□ -0.45
ATG4B-219ENST00000479941 CCDC60Q8IWA6 550 aaPredicted RBP12.21□□□□□ -0.45
ATG4B-219ENST00000479941 MTMR9Q96QG7 549 aa12.21□□□□□ -0.45
ATG4B-219ENST00000479941 TRPV6Q9H1D0 765 aa12.21□□□□□ -0.45
ATG4B-219ENST00000479941 UNC45AQ9H3U1 944 aa12.21□□□□□ -0.45
ATG4B-219ENST00000479941 PRDM5Q9NQX1 630 aaPredicted RBP12.21□□□□□ -0.45
ATG4B-219ENST00000479941 TRMT13Q9NUP7 481 aaKnown RBP12.21□□□□□ -0.45
ATG4B-219ENST00000479941 PCDHA12Q9UN75 941 aa12.21□□□□□ -0.45
ATG4B-219ENST00000479941 NOD1Q9Y239 953 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms