RNA–Protein interactions for RNA: ENST00000474833.5

PCCB-212, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 5

Gene PCCB, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-212ENST00000474833 SLC35G1Q2M3R5 365 aa17.14■□□□□ 0.33
PCCB-212ENST00000474833 B4GALNT3Q6L9W6 998 aa17.14■□□□□ 0.33
PCCB-212ENST00000474833 TRIM50Q86XT4 487 aa17.14■□□□□ 0.33
PCCB-212ENST00000474833 SETD4Q9NVD3 440 aa17.14■□□□□ 0.33
PCCB-212ENST00000474833 CLEC1BQ9P126 229 aa17.14■□□□□ 0.33
PCCB-212ENST00000474833 CD207Q9UJ71 328 aa17.14■□□□□ 0.33
PCCB-212ENST00000474833 LOC730098B7Z3J9 87 aa17.13■□□□□ 0.33
PCCB-212ENST00000474833 ST18O60284 1047 aa17.13■□□□□ 0.33
PCCB-212ENST00000474833 KDM4AO75164 1064 aa17.13■□□□□ 0.33
PCCB-212ENST00000474833 CHRNA1P02708 482 aa17.13■□□□□ 0.33
PCCB-212ENST00000474833 DNAJB1P25685 340 aa17.13■□□□□ 0.33
PCCB-212ENST00000474833 PLEKHM2Q8IWE5 1019 aa17.13■□□□□ 0.33
PCCB-212ENST00000474833 STAG2Q8N3U4 1231 aa17.13■□□□□ 0.33
PCCB-212ENST00000474833 LMBR1Q8WVP7 490 aa17.13■□□□□ 0.33
PCCB-212ENST00000474833 ZNF689Q96CS4 500 aaPredicted RBP17.13■□□□□ 0.33
PCCB-212ENST00000474833 AMNQ9BXJ7 453 aa17.13■□□□□ 0.33
PCCB-212ENST00000474833 RNF41Q9H4P4 317 aaPredicted RBP17.13■□□□□ 0.33
PCCB-212ENST00000474833 EHMT1Q9H9B1 1298 aa17.13■□□□□ 0.33
PCCB-212ENST00000474833 VAT1LQ9HCJ6 419 aa17.13■□□□□ 0.33
PCCB-212ENST00000474833 TTC3P53804 2025 aa17.13■□□□□ 0.33
PCCB-212ENST00000474833 CSPG5O95196 566 aa17.12■□□□□ 0.33
PCCB-212ENST00000474833 PARP1P09874 1014 aaKnown RBP17.12■□□□□ 0.33
PCCB-212ENST00000474833 SEMA3FQ13275 785 aa17.12■□□□□ 0.33
PCCB-212ENST00000474833 CBX2Q14781 532 aaPredicted RBP17.12■□□□□ 0.33
PCCB-212ENST00000474833 CRIPAKQ8N1N5 446 aa17.12■□□□□ 0.33
PCCB-212ENST00000474833 SMRP1Q8NCR6 262 aa17.12■□□□□ 0.33
PCCB-212ENST00000474833 ZSCAN10Q96SZ4 725 aaPredicted RBP17.12■□□□□ 0.33
PCCB-212ENST00000474833 KAT14Q9H8E8 782 aa17.12■□□□□ 0.33
PCCB-212ENST00000474833 RWDD3Q9Y3V2 267 aa17.12■□□□□ 0.33
PCCB-212ENST00000474833 FRMPD4Q14CM0 1322 aa17.12■□□□□ 0.33
PCCB-212ENST00000474833 TRIM6-TRIM34B2RNG4 842 aa17.11■□□□□ 0.33
PCCB-212ENST00000474833 DHX16O60231 1041 aaKnown RBP17.11■□□□□ 0.33
PCCB-212ENST00000474833 GLP2RO95838 553 aa17.11■□□□□ 0.33
PCCB-212ENST00000474833 GHRP10912 638 aa17.11■□□□□ 0.33
PCCB-212ENST00000474833 MRPS9P82933 396 aaKnown RBP17.11■□□□□ 0.33
PCCB-212ENST00000474833 ZXDAP98168 799 aa17.11■□□□□ 0.33
PCCB-212ENST00000474833 MGAT3Q09327 533 aa17.11■□□□□ 0.33
PCCB-212ENST00000474833 LPIN1Q14693 890 aa17.11■□□□□ 0.33
PCCB-212ENST00000474833 RUFY4Q6ZNE9 571 aa17.11■□□□□ 0.33
PCCB-212ENST00000474833 ADGRD2Q7Z7M1 963 aa17.11■□□□□ 0.33
PCCB-212ENST00000474833 LINC01599Q8WXQ3 324 aa17.11■□□□□ 0.33
PCCB-212ENST00000474833 PBXIP1Q96AQ6 731 aa17.11■□□□□ 0.33
PCCB-212ENST00000474833 GPR20Q99678 358 aa17.11■□□□□ 0.33
PCCB-212ENST00000474833 IGFLR1Q9H665 355 aa17.11■□□□□ 0.33
PCCB-212ENST00000474833 MLXIPQ9HAP2 919 aa17.11■□□□□ 0.33
PCCB-212ENST00000474833 MAP3K20Q9NYL2 800 aaKnown RBP17.11■□□□□ 0.33
PCCB-212ENST00000474833 PLAGL2Q9UPG8 496 aa17.11■□□□□ 0.33
PCCB-212ENST00000474833 PLXNA3P51805 1871 aa17.1■□□□□ 0.33
PCCB-212ENST00000474833 B4E1Z4 1266 aa17.1■□□□□ 0.33
PCCB-212ENST00000474833 CCND2P30279 289 aa17.1■□□□□ 0.33
PCCB-212ENST00000474833 VCPP55072 806 aaKnown RBP17.1■□□□□ 0.33
PCCB-212ENST00000474833 COASYQ13057 564 aa17.1■□□□□ 0.33
PCCB-212ENST00000474833 METTL7BQ6UX53 244 aa17.1■□□□□ 0.33
PCCB-212ENST00000474833 IQCA1Q86XH1 822 aa17.1■□□□□ 0.33
PCCB-212ENST00000474833 FBXL6Q8N531 539 aa17.1■□□□□ 0.33
PCCB-212ENST00000474833 INPP4AQ96PE3 977 aaPredicted RBP17.1■□□□□ 0.33
PCCB-212ENST00000474833 PLVAPQ9BX97 442 aa17.1■□□□□ 0.33
PCCB-212ENST00000474833 USP26Q9BXU7 913 aa17.1■□□□□ 0.33
PCCB-212ENST00000474833 MRPL42Q9Y6G3 142 aaKnown RBP17.1■□□□□ 0.33
PCCB-212ENST00000474833 CACNA1AO00555 2505 aa17.1■□□□□ 0.33
PCCB-212ENST00000474833 ENPP3O14638 875 aa17.09■□□□□ 0.33
PCCB-212ENST00000474833 ZBTB5O15062 677 aa17.09■□□□□ 0.33
PCCB-212ENST00000474833 DGKIO75912 1065 aa17.09■□□□□ 0.33
PCCB-212ENST00000474833 ITGB1P05556 798 aa17.09■□□□□ 0.33
PCCB-212ENST00000474833 ICAM3P32942 547 aa17.09■□□□□ 0.33
PCCB-212ENST00000474833 NDUFV1P49821 464 aa17.09■□□□□ 0.33
PCCB-212ENST00000474833 NT5C2P49902 561 aa17.09■□□□□ 0.33
PCCB-212ENST00000474833 MFAP1P55081 439 aaKnown RBP17.09■□□□□ 0.33
PCCB-212ENST00000474833 BTG3Q14201 252 aaPredicted RBP17.09■□□□□ 0.33
PCCB-212ENST00000474833 EFHBQ8N7U6 833 aa17.09■□□□□ 0.33
PCCB-212ENST00000474833 P2RX5Q93086 422 aa17.09■□□□□ 0.33
PCCB-212ENST00000474833 RILPL2Q969X0 211 aa17.09■□□□□ 0.33
PCCB-212ENST00000474833 ASIC4Q96FT7 647 aa17.09■□□□□ 0.33
PCCB-212ENST00000474833 FAM86C1Q9NVL1 165 aa17.09■□□□□ 0.33
PCCB-212ENST00000474833 ZSWIM5Q9P217 1185 aa17.09■□□□□ 0.33
PCCB-212ENST00000474833 PCDHA1Q9Y5I3 950 aa17.09■□□□□ 0.33
PCCB-212ENST00000474833 RIF1Q5UIP0 2472 aaKnown RBP17.09■□□□□ 0.33
PCCB-212ENST00000474833 SPATA31C2B4DYI2 1134 aa17.08■□□□□ 0.32
PCCB-212ENST00000474833 NOP56O00567 594 aaKnown RBP17.08■□□□□ 0.32
PCCB-212ENST00000474833 GNAT1P11488 350 aa17.08■□□□□ 0.32
PCCB-212ENST00000474833 ARHGAP4P98171 946 aa17.08■□□□□ 0.32
PCCB-212ENST00000474833 PKN1Q16512 942 aa17.08■□□□□ 0.32
PCCB-212ENST00000474833 CCDC178Q5BJE1 867 aa17.08■□□□□ 0.32
PCCB-212ENST00000474833 CYFIP1Q7L576 1253 aa17.08■□□□□ 0.32
PCCB-212ENST00000474833 SAMD3Q8N6K7 520 aa17.08■□□□□ 0.32
PCCB-212ENST00000474833 SPPL3Q8TCT6 385 aa17.08■□□□□ 0.32
PCCB-212ENST00000474833 PRRX2Q99811 253 aa17.08■□□□□ 0.32
PCCB-212ENST00000474833 MAD2L2Q9UI95 211 aa17.08■□□□□ 0.32
PCCB-212ENST00000474833 USP15Q9Y4E8 981 aaPredicted RBP17.08■□□□□ 0.32
PCCB-212ENST00000474833 PCDHGC5Q9Y5F6 944 aa17.08■□□□□ 0.32
PCCB-212ENST00000474833 GVINP1Q7Z2Y8 2422 aa17.08■□□□□ 0.32
PCCB-212ENST00000474833 PLXNA4Q9HCM2 1894 aa17.07■□□□□ 0.32
PCCB-212ENST00000474833 ZNF292O60281 2723 aa17.07■□□□□ 0.32
PCCB-212ENST00000474833 KLRF2D3W0D1 207 aa17.07■□□□□ 0.32
PCCB-212ENST00000474833 HIP1O00291 1037 aa17.07■□□□□ 0.32
PCCB-212ENST00000474833 ZNF213O14771 459 aa17.07■□□□□ 0.32
PCCB-212ENST00000474833 GFRA3O60609 400 aa17.07■□□□□ 0.32
PCCB-212ENST00000474833 SDSP20132 328 aa17.07■□□□□ 0.32
PCCB-212ENST00000474833 FBXO47Q5MNV8 452 aa17.07■□□□□ 0.32
PCCB-212ENST00000474833 SUGP1Q8IWZ8 645 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms