RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 HSF2BPO75031 334 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 NPM3O75607 178 aaKnown RBP5.04□□□□□ -1.6
CCNL1-215ENST00000474539 PRDM1O75626 825 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 GTF2F1P35269 517 aaKnown RBP eCLIP5.04□□□□□ -1.6
CCNL1-215ENST00000474539 DEKP35659 375 aaKnown RBP5.04□□□□□ -1.6
CCNL1-215ENST00000474539 ITIH3Q06033 890 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 PPIL2Q13356 520 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 HLTFQ14527 1009 aaKnown RBP eCLIP5.04□□□□□ -1.6
CCNL1-215ENST00000474539 KRT81Q14533 505 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 MAP7D1Q3KQU3 841 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 LRRC24Q50LG9 513 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 FAM47AQ5JRC9 791 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 ANGEL2Q5VTE6 544 aaKnown RBP5.04□□□□□ -1.6
CCNL1-215ENST00000474539 SFMBT2Q5VUG0 894 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 BTBD8Q5XKL5 378 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 GLB1LQ6UWU2 654 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 TOGARAM2Q6ZUX3 1019 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 KIRREL3Q8IZU9 778 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 MSL3Q8N5Y2 521 aaKnown RBP5.04□□□□□ -1.6
CCNL1-215ENST00000474539 SEPT1Q8WYJ6 367 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 OSBP2Q969R2 916 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 GSDMAQ96QA5 445 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 MCCC1Q96RQ3 725 aaPredicted RBP5.04□□□□□ -1.6
CCNL1-215ENST00000474539 MMS19Q96T76 1030 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 TSSK1BQ9BXA7 367 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 SPZ1Q9BXG8 430 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 TDRD3Q9H7E2 651 aaKnown RBP5.04□□□□□ -1.6
CCNL1-215ENST00000474539 ELP3Q9H9T3 547 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 DSEQ9UL01 958 aa5.04□□□□□ -1.6
CCNL1-215ENST00000474539 RICTORQ6R327 1708 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 A0A1W2PRG0 241 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 IL18RAPO95256 599 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 FGAP02671 866 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 CSF1RP07333 972 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 HOXA10P31260 410 aaPredicted RBP5.03□□□□□ -1.6
CCNL1-215ENST00000474539 PHBP35232 272 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 EPHA7Q15375 998 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 DNAJC21Q5F1R6 531 aaKnown RBP5.03□□□□□ -1.6
CCNL1-215ENST00000474539 XKR3Q5GH77 459 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 TRIM72Q6ZMU5 477 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 INTS8Q75QN2 995 aaKnown RBP5.03□□□□□ -1.6
CCNL1-215ENST00000474539 TRMT1LQ7Z2T5 733 aaKnown RBP5.03□□□□□ -1.6
CCNL1-215ENST00000474539 TMC6Q7Z403 805 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 RNF214Q8ND24 703 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 EAF2Q96CJ1 260 aaPredicted RBP5.03□□□□□ -1.6
CCNL1-215ENST00000474539 RPAP3Q9H6T3 665 aaPredicted RBP5.03□□□□□ -1.6
CCNL1-215ENST00000474539 ZSWIM6Q9HCJ5 1215 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 VTA1Q9NP79 307 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 SEC31BQ9NQW1 1179 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 ZNF212Q9UDV6 495 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 MKRN1Q9UHC7 482 aaKnown RBP5.03□□□□□ -1.6
CCNL1-215ENST00000474539 ANAPC4Q9UJX5 808 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 STAP1Q9ULZ2 295 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 HPCAL4Q9UM19 191 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 SNX14Q9Y5W7 946 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 SCINQ9Y6U3 715 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 A0A0G2JLW4 131 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 AKR1B15C9JRZ8 316 aaPredicted RBP5.03□□□□□ -1.6
CCNL1-215ENST00000474539 GOLGA8MH3BSY2 632 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 NTSR2O95665 410 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 AMHP03971 560 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 ARL4AP40617 200 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 APLP1P51693 650 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 TAP1Q03518 808 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 PEX6Q13608 980 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 RAPGEF1Q13905 1077 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 LINC00116Q8NCU8 138 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 DNERQ8NFT8 737 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 LARP4BQ92615 738 aaKnown RBP5.03□□□□□ -1.6
CCNL1-215ENST00000474539 MAP4K1Q92918 833 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 ZDHHC15Q96MV8 337 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 HMX1Q9NP08 348 aaPredicted RBP5.03□□□□□ -1.6
CCNL1-215ENST00000474539 DYRK4Q9NR20 520 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 TMEM131LA2VDJ0 1609 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 ESYT2A0FGR8 921 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 CTAGE15A4D2H0 777 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 CTAGE9A4FU28 777 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 TMEM88BA6NKF7 163 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 GOLGA8JA6NMD2 632 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 STK25O00506 426 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 GDF11O95390 407 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 CTAGE8P0CG41 777 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 NLRP12P59046 1061 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 LRRC63Q05C16 580 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 PPP1R7Q15435 360 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 KRT39Q6A163 491 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 TWF2Q6IBS0 349 aaKnown RBP5.03□□□□□ -1.6
CCNL1-215ENST00000474539 CTAGE6Q86UF2 777 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 DDX42Q86XP3 938 aaKnown RBP eCLIP5.03□□□□□ -1.6
CCNL1-215ENST00000474539 CTAGE4Q8IX94 777 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 PROM2Q8N271 834 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 OSCP1Q8WVF1 389 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 DHX38Q92620 1227 aaKnown RBP5.03□□□□□ -1.6
CCNL1-215ENST00000474539 EDC3Q96F86 508 aaKnown RBP5.03□□□□□ -1.6
CCNL1-215ENST00000474539 MRFAP1L1Q96HT8 127 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 CFAP57Q96MR6 1250 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 MAGEB5Q9BZ81 275 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 JADE2Q9NQC1 790 aa5.03□□□□□ -1.6
CCNL1-215ENST00000474539 COL5A2P05997 1499 aaPredicted RBP5.03□□□□□ -1.6
CCNL1-215ENST00000474539 FRMPD2Q68DX3 1309 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms