RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 MINDY4BA8MYZ0 360 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 CBFA2T2O43439 604 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 CUTAO60888 179 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 COBLO75128 1261 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 DDAH1O94760 285 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 B3GALT4O96024 378 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 TGFB1P01137 390 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 FDPSP14324 419 aaKnown RBP6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 IFNAR1P17181 557 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 MAP4P27816 1152 aaKnown RBP6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 HIBADHP31937 336 aaKnown RBP6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 RFC4P35249 363 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 GRIK1P39086 918 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 SYKP43405 635 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 ZNF75DP51815 510 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 RPS8P62241 208 aaKnown RBP6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 PDE4BQ07343 736 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 NOLC1Q14978 699 aaKnown RBP eCLIP6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 SLC39A14Q15043 492 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 SGO2Q562F6 1265 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 HP1BP3Q5SSJ5 553 aaPredicted RBP6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 SARM1Q6SZW1 724 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 CYB5R4Q7L1T6 521 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 DZIP1Q86YF9 867 aaKnown RBP6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 LCORLQ8N3X6 602 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 MIGA1Q8NAN2 632 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 SPC24Q8NBT2 197 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 IGDCC4Q8TDY8 1250 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 NUP133Q8WUM0 1156 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 MRFAP1L1Q96HT8 127 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 C8orf37Q96NL8 207 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 FOXP1Q9H334 677 aaPredicted RBP6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 ZNF287Q9HBT7 754 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 ABCB6Q9NP58 842 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 ARPP21Q9UBL0 812 aaPredicted RBP6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 CLIP2Q9UDT6 1046 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 DCTN4Q9UJW0 460 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 CCNL1Q9UK58 526 aaPredicted RBP6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 PCDHA7Q9UN72 937 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 TIAM2Q8IVF5 1701 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 SPATA31A6Q5VVP1 1343 aa6.72□□□□□ -1.33
ATPAF1-204ENST00000474020 LAMA4Q16363 1823 aa6.71□□□□□ -1.33
ATPAF1-204ENST00000474020 A0A0G2JLW4 131 aa6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 FOXP2O15409 715 aa6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 CCP110O43303 1012 aa6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 RANBP6O60518 1105 aaKnown RBP6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 DTNBO60941 627 aa6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 BAG3O95817 575 aa6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 LDHCP07864 332 aa6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 MAOBP27338 520 aa6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 SSTR4P31391 388 aa6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 KIF5BP33176 963 aa6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 RBM6P78332 1123 aaKnown RBP6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 POU4F3Q15319 338 aa6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 GLIPR1L2Q4G1C9 344 aa6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 IFIT1BQ5T764 474 aaKnown RBP6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 TMC7Q7Z402 723 aa6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 ZNF804AQ7Z570 1209 aa6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 RAB11FIP4Q86YS3 637 aa6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 NOSTRINQ8IVI9 506 aa6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 CCDC144CPQ8IYA2 1237 aa6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 ZNF654Q8IZM8 581 aa6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 LINC00116Q8NCU8 138 aa6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 CTCFLQ8NI51 663 aaPredicted RBP6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 WDR66Q8TBY9 1149 aa6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 BPIFA3Q9BQP9 254 aa6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 PYM1Q9BRP8 204 aaKnown RBP6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 TRIM56Q9BRZ2 755 aaKnown RBP6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 RNF26Q9BY78 433 aaPredicted RBP6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 ATP8A2Q9NTI2 1148 aa6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 ZSWIM5Q9P217 1185 aa6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 BIN2Q9UBW5 565 aaPredicted RBP6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 ANAPC4Q9UJX5 808 aa6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 CLIC4Q9Y696 253 aa6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 TCHHQ07283 1943 aa6.71□□□□□ -1.34
ATPAF1-204ENST00000474020 BCORQ6W2J9 1755 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 UQCRHLA0A096LP55 91 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 A0A1B0GVL5 298 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 KIF2AO00139 706 aaPredicted RBP6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 DYNC1I1O14576 645 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 RRP9O43818 475 aaKnown RBP6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 ZNF202O95125 648 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 SMC2O95347 1197 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 MMP1P03956 469 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 CTSBP07858 339 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 UQCRHP07919 91 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 DRD2P14416 443 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 PFKFB1P16118 471 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 U2AF2P26368 475 aaKnown RBP eCLIP6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 KRT2P35908 639 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 GYG1P46976 350 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 GNAQP50148 359 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 NDUFA8P51970 172 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 ST5P78524 1137 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 SOX4Q06945 474 aaPredicted RBP6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 RPS26P11Q5JNZ5 115 aaPredicted RBP6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 OTUD7BQ6GQQ9 843 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 PLA2G4DQ86XP0 818 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 FANCBQ8NB91 859 aa6.7□□□□□ -1.34
ATPAF1-204ENST00000474020 C2CD4AQ8NCU7 369 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms