RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 LTFP02788 710 aa7.43□□□□□ -1.22
CD46-213ENST00000471987 CKMP06732 381 aa7.43□□□□□ -1.22
CD46-213ENST00000471987 COL6A1P12109 1028 aa7.43□□□□□ -1.22
CD46-213ENST00000471987 EPHA5P54756 1037 aa7.43□□□□□ -1.22
CD46-213ENST00000471987 SMAD2Q15796 467 aaKnown RBP7.43□□□□□ -1.22
CD46-213ENST00000471987 NAALADL2Q58DX5 795 aa7.43□□□□□ -1.22
CD46-213ENST00000471987 ARHGEF18Q6ZSZ5 1173 aa7.43□□□□□ -1.22
CD46-213ENST00000471987 KCTD1Q719H9 257 aa7.43□□□□□ -1.22
CD46-213ENST00000471987 SCUBE1Q8IWY4 988 aa7.43□□□□□ -1.22
CD46-213ENST00000471987 IPPKQ9H8X2 491 aa7.43□□□□□ -1.22
CD46-213ENST00000471987 PPP4R1LQ9P1A2 415 aa7.43□□□□□ -1.22
CD46-213ENST00000471987 PPP1R1BQ9UD71 204 aaPredicted RBP7.43□□□□□ -1.22
CD46-213ENST00000471987 ZDHHC9Q9Y397 364 aa7.43□□□□□ -1.22
CD46-213ENST00000471987 NPEPPSL1A6NEC2 478 aa7.42□□□□□ -1.22
CD46-213ENST00000471987 AQP7O14520 342 aa7.42□□□□□ -1.22
CD46-213ENST00000471987 ENO2P09104 434 aaPredicted RBP7.42□□□□□ -1.22
CD46-213ENST00000471987 ZNF20P17024 532 aa7.42□□□□□ -1.22
CD46-213ENST00000471987 EPHB4P54760 987 aa7.42□□□□□ -1.22
CD46-213ENST00000471987 PPP2CBP62714 309 aa7.42□□□□□ -1.22
CD46-213ENST00000471987 PPP2CAP67775 309 aa7.42□□□□□ -1.22
CD46-213ENST00000471987 RASGRF1Q13972 1273 aa7.42□□□□□ -1.22
CD46-213ENST00000471987 SKIDA1Q1XH10 827 aa7.42□□□□□ -1.22
CD46-213ENST00000471987 MTERF2Q49AM1 385 aa7.42□□□□□ -1.22
CD46-213ENST00000471987 NBPF6Q5VWK0 638 aa7.42□□□□□ -1.22
CD46-213ENST00000471987 CD276Q5ZPR3 534 aa7.42□□□□□ -1.22
CD46-213ENST00000471987 SPATC1Q76KD6 591 aa7.42□□□□□ -1.22
CD46-213ENST00000471987 IGDCC4Q8TDY8 1250 aa7.42□□□□□ -1.22
CD46-213ENST00000471987 NBPF4Q96M43 638 aa7.42□□□□□ -1.22
CD46-213ENST00000471987 CDC6Q99741 560 aa7.42□□□□□ -1.22
CD46-213ENST00000471987 KRTAP3-1Q9BYR8 98 aa7.42□□□□□ -1.22
CD46-213ENST00000471987 JADE2Q9NQC1 790 aa7.42□□□□□ -1.22
CD46-213ENST00000471987 ADAM29Q9UKF5 820 aa7.42□□□□□ -1.22
CD46-213ENST00000471987 TELO2Q9Y4R8 837 aa7.42□□□□□ -1.22
CD46-213ENST00000471987 ASXL2Q76L83 1435 aa7.42□□□□□ -1.22
CD46-213ENST00000471987 C1QTNF3-AMACRE9PGA6 284 aa7.41□□□□□ -1.22
CD46-213ENST00000471987 B4GALT4O60513 344 aa7.41□□□□□ -1.22
CD46-213ENST00000471987 KLHL18O94889 574 aa7.41□□□□□ -1.22
CD46-213ENST00000471987 PAK1Q13153 545 aa7.41□□□□□ -1.22
CD46-213ENST00000471987 PHF19Q5T6S3 580 aa7.41□□□□□ -1.22
CD46-213ENST00000471987 MAMDC2Q7Z304 686 aaPredicted RBP7.41□□□□□ -1.22
CD46-213ENST00000471987 DVL3Q92997 716 aaPredicted RBP7.41□□□□□ -1.22
CD46-213ENST00000471987 IPO9Q96P70 1041 aaKnown RBP7.41□□□□□ -1.22
CD46-213ENST00000471987 CCDC113Q9H0I3 377 aa7.41□□□□□ -1.22
CD46-213ENST00000471987 ARHGAP20Q9P2F6 1191 aa7.41□□□□□ -1.22
CD46-213ENST00000471987 ZFP69BQ9UJL9 534 aa7.41□□□□□ -1.22
CD46-213ENST00000471987 TRAF6Q9Y4K3 522 aa7.41□□□□□ -1.22
CD46-213ENST00000471987 ADCY3O60266 1144 aa7.4□□□□□ -1.22
CD46-213ENST00000471987 KNG1P01042 644 aa7.4□□□□□ -1.22
CD46-213ENST00000471987 ATP2B1P20020 1258 aa7.4□□□□□ -1.22
CD46-213ENST00000471987 SUMO1P63165 101 aaKnown RBP7.4□□□□□ -1.22
CD46-213ENST00000471987 PFKPQ01813 784 aa7.4□□□□□ -1.22
CD46-213ENST00000471987 SSRP1Q08945 709 aaKnown RBP7.4□□□□□ -1.22
CD46-213ENST00000471987 MTDHQ86UE4 582 aaKnown RBP7.4□□□□□ -1.22
CD46-213ENST00000471987 CIR1Q86X95 450 aaPredicted RBP7.4□□□□□ -1.22
CD46-213ENST00000471987 NUDT10Q8NFP7 164 aa7.4□□□□□ -1.22
CD46-213ENST00000471987 PTPRN2Q92932 1015 aa7.4□□□□□ -1.22
CD46-213ENST00000471987 NUDT11Q96G61 164 aa7.4□□□□□ -1.22
CD46-213ENST00000471987 TRBV23-1A0A0A0MS06 115 aa7.39□□□□□ -1.23
CD46-213ENST00000471987 ZNF839A8K0R7 811 aa7.39□□□□□ -1.23
CD46-213ENST00000471987 GLRBP48167 497 aa7.39□□□□□ -1.23
CD46-213ENST00000471987 SLFN13Q68D06 897 aa7.39□□□□□ -1.23
CD46-213ENST00000471987 Q6ZUG5 572 aa7.39□□□□□ -1.23
CD46-213ENST00000471987 NLGN4XQ8N0W4 816 aa7.39□□□□□ -1.23
CD46-213ENST00000471987 ZBTB38Q8NAP3 1195 aaPredicted RBP7.39□□□□□ -1.23
CD46-213ENST00000471987 TANGO6Q9C0B7 1094 aa7.39□□□□□ -1.23
CD46-213ENST00000471987 KCND1Q9NSA2 647 aa7.39□□□□□ -1.23
CD46-213ENST00000471987 PFDN2Q9UHV9 154 aa7.39□□□□□ -1.23
CD46-213ENST00000471987 ST6GALNAC2Q9UJ37 374 aa7.39□□□□□ -1.23
CD46-213ENST00000471987 CCDC85CA6NKD9 419 aa7.38□□□□□ -1.23
CD46-213ENST00000471987 WNT9AO14904 365 aa7.38□□□□□ -1.23
CD46-213ENST00000471987 NAT1P18440 290 aa7.38□□□□□ -1.23
CD46-213ENST00000471987 RALYLQ86SE5 291 aaKnown RBP7.38□□□□□ -1.23
CD46-213ENST00000471987 STPG3Q8N7X2 389 aa7.38□□□□□ -1.23
CD46-213ENST00000471987 KISS1RQ969F8 398 aaPredicted RBP7.38□□□□□ -1.23
CD46-213ENST00000471987 CD244Q9BZW8 370 aa7.38□□□□□ -1.23
CD46-213ENST00000471987 TMPRSS5Q9H3S3 457 aa7.38□□□□□ -1.23
CD46-213ENST00000471987 SIRPGQ9P1W8 387 aa7.38□□□□□ -1.23
CD46-213ENST00000471987 ACOT7O00154 380 aa7.37□□□□□ -1.23
CD46-213ENST00000471987 GPR42O15529 346 aa7.37□□□□□ -1.23
CD46-213ENST00000471987 TNFRSF1AP19438 455 aa7.37□□□□□ -1.23
CD46-213ENST00000471987 ICAM4Q14773 271 aa7.37□□□□□ -1.23
CD46-213ENST00000471987 GPR19Q15760 415 aa7.37□□□□□ -1.23
CD46-213ENST00000471987 SH3RF2Q8TEC5 729 aa7.37□□□□□ -1.23
CD46-213ENST00000471987 FBXW5Q969U6 566 aa7.37□□□□□ -1.23
CD46-213ENST00000471987 AJUBAQ96IF1 538 aa7.37□□□□□ -1.23
CD46-213ENST00000471987 SRPK3Q9UPE1 567 aa7.37□□□□□ -1.23
CD46-213ENST00000471987 TCRBV5S4A2TA0A5A2 114 aa7.36□□□□□ -1.23
CD46-213ENST00000471987 H0Y858 1186 aa7.36□□□□□ -1.23
CD46-213ENST00000471987 FAM209AQ5JX71 171 aa7.36□□□□□ -1.23
CD46-213ENST00000471987 BTBD8Q5XKL5 378 aa7.36□□□□□ -1.23
CD46-213ENST00000471987 ARHGAP36Q6ZRI8 547 aa7.36□□□□□ -1.23
CD46-213ENST00000471987 REXO1L1PQ8IX06 675 aa7.36□□□□□ -1.23
CD46-213ENST00000471987 DNERQ8NFT8 737 aa7.36□□□□□ -1.23
CD46-213ENST00000471987 CDK5RAP1Q96SZ6 601 aaKnown RBP7.36□□□□□ -1.23
CD46-213ENST00000471987 HIRIP3Q9BW71 556 aaPredicted RBP7.36□□□□□ -1.23
CD46-213ENST00000471987 CATSPERZQ9NTU4 200 aa7.36□□□□□ -1.23
CD46-213ENST00000471987 GSTA4O15217 222 aa7.35□□□□□ -1.23
CD46-213ENST00000471987 MATN3O15232 486 aa7.35□□□□□ -1.23
CD46-213ENST00000471987 IL18BPO95998 194 aa7.35□□□□□ -1.23
CD46-213ENST00000471987 C6orf222P0C671 652 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms