RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 MKRN4PQ13434 485 aaPredicted RBP8.7□□□□□ -1.02
TPM3-215ENST00000469717 MEI1Q5TIA1 1274 aa8.7□□□□□ -1.02
TPM3-215ENST00000469717 PDXDC1Q6P996 788 aa8.7□□□□□ -1.02
TPM3-215ENST00000469717 ZNF513Q8N8E2 541 aaPredicted RBP8.7□□□□□ -1.02
TPM3-215ENST00000469717 ESR2Q92731 530 aa8.7□□□□□ -1.02
TPM3-215ENST00000469717 XPO6Q96QU8 1125 aaKnown RBP8.7□□□□□ -1.02
TPM3-215ENST00000469717 NACAP1Q9BZK3 213 aa8.7□□□□□ -1.02
TPM3-215ENST00000469717 ISCUQ9H1K1 167 aa8.7□□□□□ -1.02
TPM3-215ENST00000469717 MLXIPLQ9NP71 852 aa8.7□□□□□ -1.02
TPM3-215ENST00000469717 LRP2BPQ9P2M1 347 aa8.7□□□□□ -1.02
TPM3-215ENST00000469717 C6orf229H3BNL8 230 aa8.7□□□□□ -1.02
TPM3-215ENST00000469717 PJA2O43164 708 aa8.7□□□□□ -1.02
TPM3-215ENST00000469717 DNAJC8O75937 253 aaPredicted RBP8.7□□□□□ -1.02
TPM3-215ENST00000469717 UBOX5O94941 541 aa8.7□□□□□ -1.02
TPM3-215ENST00000469717 MMEP08473 750 aa8.7□□□□□ -1.02
TPM3-215ENST00000469717 CYP7A1P22680 504 aa8.7□□□□□ -1.02
TPM3-215ENST00000469717 LONP1P36776 959 aaKnown RBP8.7□□□□□ -1.02
TPM3-215ENST00000469717 CAPRIN2Q6IMN6 1127 aaKnown RBP8.7□□□□□ -1.02
TPM3-215ENST00000469717 KSR1Q8IVT5 923 aa8.7□□□□□ -1.02
TPM3-215ENST00000469717 MAB21L3Q8N8X9 362 aa8.7□□□□□ -1.02
TPM3-215ENST00000469717 FAM133AQ8N9E0 248 aa8.7□□□□□ -1.02
TPM3-215ENST00000469717 MARCH10Q8NA82 808 aaPredicted RBP8.7□□□□□ -1.02
TPM3-215ENST00000469717 CHMP6Q96FZ7 201 aa8.7□□□□□ -1.02
TPM3-215ENST00000469717 RTCBQ9Y3I0 505 aaKnown RBP8.7□□□□□ -1.02
TPM3-215ENST00000469717 GLI3P10071 1580 aa8.7□□□□□ -1.02
TPM3-215ENST00000469717 ADAMTS7Q9UKP4 1686 aa8.7□□□□□ -1.02
TPM3-215ENST00000469717 MYBP10242 640 aa8.7□□□□□ -1.02
TPM3-215ENST00000469717 IRX1P78414 480 aaPredicted RBP8.7□□□□□ -1.02
TPM3-215ENST00000469717 LRRC14Q15048 493 aa8.7□□□□□ -1.02
TPM3-215ENST00000469717 TMTC2Q8N394 836 aa8.7□□□□□ -1.02
TPM3-215ENST00000469717 CCDC197Q8NCU1 140 aa8.7□□□□□ -1.02
TPM3-215ENST00000469717 SLC17A8Q8NDX2 589 aa8.7□□□□□ -1.02
TPM3-215ENST00000469717 DHTKD1Q96HY7 919 aaPredicted RBP8.7□□□□□ -1.02
TPM3-215ENST00000469717 SPAG5Q96R06 1193 aa8.7□□□□□ -1.02
TPM3-215ENST00000469717 USP54Q70EL1 1684 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 C1orf167Q5SNV9 1468 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 MPHOSPH10O00566 681 aaKnown RBP8.69□□□□□ -1.02
TPM3-215ENST00000469717 RBM5P52756 815 aaKnown RBP eCLIP8.69□□□□□ -1.02
TPM3-215ENST00000469717 RNASELQ05823 741 aaKnown RBP8.69□□□□□ -1.02
TPM3-215ENST00000469717 IFFO1Q0D2I5 559 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 RAPGEF1Q13905 1077 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 TRIM68Q6AZZ1 485 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 TMC3Q7Z5M5 1100 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 CCDC50Q8IVM0 306 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 MAGEC3Q8TD91 643 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 ZNF317Q96PQ6 595 aaPredicted RBP8.69□□□□□ -1.02
TPM3-215ENST00000469717 PRMT1Q99873 361 aaKnown RBP8.69□□□□□ -1.02
TPM3-215ENST00000469717 GOPCQ9HD26 462 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 PNMA3Q9UL41 463 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 ZNF652Q9Y2D9 606 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 FLT1P17948 1338 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 NOL4O94818 638 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 VIMP08670 466 aaKnown RBP8.69□□□□□ -1.02
TPM3-215ENST00000469717 FIGNQ5HY92 759 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 MIS18BP1Q6P0N0 1132 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 HOOK2Q96ED9 719 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 L3MBTL3Q96JM7 780 aaPredicted RBP8.69□□□□□ -1.02
TPM3-215ENST00000469717 SETDB2Q96T68 719 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 TBC1D7Q9P0N9 293 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 TRPC5Q9UL62 973 aaPredicted RBP8.69□□□□□ -1.02
TPM3-215ENST00000469717 NUP188Q5SRE5 1749 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 F8VZ95 297 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 KRT16P08779 473 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 TECP42680 631 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 TNNC1P63316 161 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 NAB2Q15742 525 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 ERMARDQ5T6L9 678 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 CABP7Q86V35 215 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 BLIDQ8IZY5 108 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 MGARPQ8TDB4 240 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 CCDC113Q9H0I3 377 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 ADAM7Q9H2U9 754 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 KDM4CQ9H3R0 1056 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 SLC12A4Q9UP95 1085 aa8.69□□□□□ -1.02
TPM3-215ENST00000469717 RTL9Q8NET4 1388 aa8.68□□□□□ -1.02
TPM3-215ENST00000469717 IGF2BP3O00425 579 aaKnown RBP eCLIP8.68□□□□□ -1.021e-7■■■■□ 23.3
TPM3-215ENST00000469717 SMNDC1O75940 238 aaKnown RBP eCLIP8.68□□□□□ -1.02
TPM3-215ENST00000469717 CYP2D6P10635 497 aa8.68□□□□□ -1.02
TPM3-215ENST00000469717 RXRBP28702 533 aa8.68□□□□□ -1.02
TPM3-215ENST00000469717 TUBP50607 506 aa8.68□□□□□ -1.02
TPM3-215ENST00000469717 CTSWP56202 376 aa8.68□□□□□ -1.02
TPM3-215ENST00000469717 RCSD1Q6JBY9 416 aa8.68□□□□□ -1.02
TPM3-215ENST00000469717 METTL13Q8N6R0 699 aa8.68□□□□□ -1.02
TPM3-215ENST00000469717 ZBTB38Q8NAP3 1195 aaPredicted RBP8.68□□□□□ -1.02
TPM3-215ENST00000469717 LBHD1Q9BQE6 289 aaPredicted RBP8.68□□□□□ -1.02
TPM3-215ENST00000469717 FGFBP2Q9BYJ0 223 aa8.68□□□□□ -1.02
TPM3-215ENST00000469717 PIDD1Q9HB75 910 aa8.68□□□□□ -1.02
TPM3-215ENST00000469717 NOC2LQ9Y3T9 749 aaKnown RBP8.68□□□□□ -1.02
TPM3-215ENST00000469717 IRS4O14654 1257 aaPredicted RBP8.68□□□□□ -1.02
TPM3-215ENST00000469717 EVI5O60447 810 aa8.68□□□□□ -1.02
TPM3-215ENST00000469717 LINGO3P0C6S8 592 aa8.68□□□□□ -1.02
TPM3-215ENST00000469717 ACTN1P12814 892 aa8.68□□□□□ -1.02
TPM3-215ENST00000469717 IGHMBP2P38935 993 aaKnown RBP8.68□□□□□ -1.02
TPM3-215ENST00000469717 SLC8A3P57103 927 aa8.68□□□□□ -1.02
TPM3-215ENST00000469717 GNPTABQ3T906 1256 aa8.68□□□□□ -1.02
TPM3-215ENST00000469717 FAM83BQ5T0W9 1011 aa8.68□□□□□ -1.02
TPM3-215ENST00000469717 LSM14BQ9BX40 385 aaKnown RBP8.68□□□□□ -1.02
TPM3-215ENST00000469717 FAM129AQ9BZQ8 928 aa8.68□□□□□ -1.02
TPM3-215ENST00000469717 SPATS2LQ9NUQ6 558 aaKnown RBP8.68□□□□□ -1.02
TPM3-215ENST00000469717 TMEM59LQ9UK28 342 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms