RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 JAK3P52333 1124 aa18.05■□□□□ 0.48
GPC1-207ENST00000466624 ACTR2P61160 394 aa18.05■□□□□ 0.48
GPC1-207ENST00000466624 BEX3Q00994 111 aa18.05■□□□□ 0.48
GPC1-207ENST00000466624 SF3A1Q15459 793 aaKnown RBP18.05■□□□□ 0.48
GPC1-207ENST00000466624 ARL6IP4Q66PJ3 421 aaKnown RBP18.05■□□□□ 0.48
GPC1-207ENST00000466624 PCDHA12Q9UN75 941 aa18.05■□□□□ 0.48
GPC1-207ENST00000466624 TCHHQ07283 1943 aa18.05■□□□□ 0.48
GPC1-207ENST00000466624 GSTTP1A0A1W2PQM5 241 aa18.04■□□□□ 0.48
GPC1-207ENST00000466624 WDR64B1ANS9 1081 aa18.04■□□□□ 0.48
GPC1-207ENST00000466624 DDX39AO00148 427 aaKnown RBP18.04■□□□□ 0.48
GPC1-207ENST00000466624 SORBS3O60504 671 aa18.04■□□□□ 0.48
GPC1-207ENST00000466624 CABYRO75952 493 aa18.04■□□□□ 0.48
GPC1-207ENST00000466624 IRX5P78411 483 aaPredicted RBP18.04■□□□□ 0.48
GPC1-207ENST00000466624 SPIRE1Q08AE8 756 aa18.04■□□□□ 0.48
GPC1-207ENST00000466624 KCNA10Q16322 511 aa18.04■□□□□ 0.48
GPC1-207ENST00000466624 GJA10Q969M2 543 aa18.04■□□□□ 0.48
GPC1-207ENST00000466624 USP28Q96RU2 1077 aa18.04■□□□□ 0.48
GPC1-207ENST00000466624 UNC45AQ9H3U1 944 aa18.04■□□□□ 0.48
GPC1-207ENST00000466624 TTC12Q9H892 705 aaPredicted RBP18.04■□□□□ 0.48
GPC1-207ENST00000466624 CHMP5Q9NZZ3 219 aa18.04■□□□□ 0.48
GPC1-207ENST00000466624 PHF24Q9UPV7 400 aa18.04■□□□□ 0.48
GPC1-207ENST00000466624 BRCA2P51587 3418 aa18.04■□□□□ 0.48
GPC1-207ENST00000466624 EMSYQ7Z589 1322 aa18.03■□□□□ 0.48
GPC1-207ENST00000466624 IGKV6D-21A0A0A0MT36 114 aa18.03■□□□□ 0.48
GPC1-207ENST00000466624 ASGR1P07306 291 aa18.03■□□□□ 0.48
GPC1-207ENST00000466624 TCF7P36402 384 aaPredicted RBP18.03■□□□□ 0.48
GPC1-207ENST00000466624 TXKP42681 527 aa18.03■□□□□ 0.48
GPC1-207ENST00000466624 MNX1P50219 401 aaPredicted RBP18.03■□□□□ 0.48
GPC1-207ENST00000466624 FXR2P51116 673 aaKnown RBP eCLIP18.03■□□□□ 0.48
GPC1-207ENST00000466624 ACLYP53396 1101 aa18.03■□□□□ 0.48
GPC1-207ENST00000466624 PURAQ00577 322 aaKnown RBP18.03■□□□□ 0.48
GPC1-207ENST00000466624 SP4Q02446 784 aa18.03■□□□□ 0.48
GPC1-207ENST00000466624 PTPAQ15257 358 aa18.03■□□□□ 0.48
GPC1-207ENST00000466624 TMEM266Q2M3C6 531 aa18.03■□□□□ 0.48
GPC1-207ENST00000466624 MIS18BP1Q6P0N0 1132 aa18.03■□□□□ 0.48
GPC1-207ENST00000466624 ABHD15Q6UXT9 468 aa18.03■□□□□ 0.48
GPC1-207ENST00000466624 UIMC1Q96RL1 719 aa18.03■□□□□ 0.48
GPC1-207ENST00000466624 CFAP45Q9UL16 551 aa18.03■□□□□ 0.48
GPC1-207ENST00000466624 PCDHA10Q9Y5I2 948 aa18.03■□□□□ 0.48
GPC1-207ENST00000466624 CLIC4Q9Y696 253 aa18.03■□□□□ 0.48
GPC1-207ENST00000466624 LGR5O75473 907 aa18.02■□□□□ 0.48
GPC1-207ENST00000466624 YEATS4O95619 227 aa18.02■□□□□ 0.48
GPC1-207ENST00000466624 PSAPP07602 524 aa18.02■□□□□ 0.48
GPC1-207ENST00000466624 SUPT20HL2P0C7V6 817 aa18.02■□□□□ 0.48
GPC1-207ENST00000466624 PDIA5Q14554 519 aa18.02■□□□□ 0.48
GPC1-207ENST00000466624 SLC39A14Q15043 492 aa18.02■□□□□ 0.48
GPC1-207ENST00000466624 RAB34Q9BZG1 259 aa18.02■□□□□ 0.48
GPC1-207ENST00000466624 FTOQ9C0B1 505 aaKnown RBP eCLIP18.02■□□□□ 0.48
GPC1-207ENST00000466624 DISC1Q9NRI5 854 aa18.02■□□□□ 0.48
GPC1-207ENST00000466624 TELO2Q9Y4R8 837 aa18.02■□□□□ 0.48
GPC1-207ENST00000466624 F2P00734 622 aa18.01■□□□□ 0.47
GPC1-207ENST00000466624 MYCNP04198 464 aaPredicted RBP18.01■□□□□ 0.47
GPC1-207ENST00000466624 LGALS2P05162 132 aa18.01■□□□□ 0.47
GPC1-207ENST00000466624 MYL3P08590 195 aa18.01■□□□□ 0.47
GPC1-207ENST00000466624 COL6A1P12109 1028 aa18.01■□□□□ 0.47
GPC1-207ENST00000466624 DTHD1Q6ZMT9 781 aa18.01■□□□□ 0.47
GPC1-207ENST00000466624 PLPPR4Q7Z2D5 763 aa18.01■□□□□ 0.47
GPC1-207ENST00000466624 MIER3Q7Z3K6 550 aa18.01■□□□□ 0.47
GPC1-207ENST00000466624 IGSF22Q8N9C0 903 aa18.01■□□□□ 0.47
GPC1-207ENST00000466624 LINC00301Q8NCQ3 95 aa18.01■□□□□ 0.47
GPC1-207ENST00000466624 AFAP1L1Q8TED9 768 aa18.01■□□□□ 0.47
GPC1-207ENST00000466624 C16orf70Q9BSU1 422 aa18.01■□□□□ 0.47
GPC1-207ENST00000466624 MTG1Q9BT17 334 aaPredicted RBP18.01■□□□□ 0.47
GPC1-207ENST00000466624 KATNAL1Q9BW62 490 aa18.01■□□□□ 0.47
GPC1-207ENST00000466624 SEZ6LQ9BYH1 1024 aa18.01■□□□□ 0.47
GPC1-207ENST00000466624 STK24Q9Y6E0 443 aa18.01■□□□□ 0.47
GPC1-207ENST00000466624 A0A1W2PQ45 241 aaPredicted RBP18■□□□□ 0.47
GPC1-207ENST00000466624 A0A1W2PQY0 241 aa18■□□□□ 0.47
GPC1-207ENST00000466624 CCDC85CA6NKD9 419 aa18■□□□□ 0.47
GPC1-207ENST00000466624 CHMP2AO43633 222 aa18■□□□□ 0.47
GPC1-207ENST00000466624 EN2P19622 333 aaPredicted RBP18■□□□□ 0.47
GPC1-207ENST00000466624 TECP42680 631 aa18■□□□□ 0.47
GPC1-207ENST00000466624 SLC26A2P50443 739 aa18■□□□□ 0.47
GPC1-207ENST00000466624 KRT85P78386 507 aa18■□□□□ 0.47
GPC1-207ENST00000466624 DNM1Q05193 864 aaKnown RBP18■□□□□ 0.47
GPC1-207ENST00000466624 EPHA7Q15375 998 aa18■□□□□ 0.47
GPC1-207ENST00000466624 FAM160B1Q5W0V3 765 aa18■□□□□ 0.47
GPC1-207ENST00000466624 UBE2Q1Q7Z7E8 422 aa18■□□□□ 0.47
GPC1-207ENST00000466624 NEK9Q8TD19 979 aa18■□□□□ 0.47
GPC1-207ENST00000466624 KAT2BQ92831 832 aa18■□□□□ 0.47
GPC1-207ENST00000466624 FERMT2Q96AC1 680 aa18■□□□□ 0.47
GPC1-207ENST00000466624 GLT1D1Q96MS3 346 aa18■□□□□ 0.47
GPC1-207ENST00000466624 SMARCAD1Q9H4L7 1026 aa18■□□□□ 0.47
GPC1-207ENST00000466624 AZI2Q9H6S1 392 aa18■□□□□ 0.47
GPC1-207ENST00000466624 ZNF215Q9UL58 517 aaPredicted RBP18■□□□□ 0.47
GPC1-207ENST00000466624 SAMM50Q9Y512 469 aa18■□□□□ 0.47
GPC1-207ENST00000466624 IGSF9BQ9UPX0 1349 aa17.99■□□□□ 0.47
GPC1-207ENST00000466624 HAS3O00219 553 aa17.99■□□□□ 0.47
GPC1-207ENST00000466624 EML1O00423 815 aa17.99■□□□□ 0.47
GPC1-207ENST00000466624 PPP6R2O75170 966 aa17.99■□□□□ 0.47
GPC1-207ENST00000466624 CEBPZQ03701 1054 aaKnown RBP17.99■□□□□ 0.47
GPC1-207ENST00000466624 STK38Q15208 465 aa17.99■□□□□ 0.47
GPC1-207ENST00000466624 IL17AQ16552 155 aa17.99■□□□□ 0.47
GPC1-207ENST00000466624 NCAPH2Q6IBW4 605 aa17.99■□□□□ 0.47
GPC1-207ENST00000466624 CXCL17Q6UXB2 119 aa17.99■□□□□ 0.47
GPC1-207ENST00000466624 CCDC60Q8IWA6 550 aaPredicted RBP17.99■□□□□ 0.47
GPC1-207ENST00000466624 AK8Q96MA6 479 aa17.99■□□□□ 0.47
GPC1-207ENST00000466624 PCYT2Q99447 389 aa17.99■□□□□ 0.47
GPC1-207ENST00000466624 ZNF302Q9NR11 478 aa17.99■□□□□ 0.47
GPC1-207ENST00000466624 ERAP1Q9NZ08 941 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms