RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 INTS4Q96HW7 963 aaKnown RBP16.44■□□□□ 0.22
SQSTM1-205ENST00000464493 TUT1Q9H6E5 874 aaKnown RBP16.44■□□□□ 0.22
SQSTM1-205ENST00000464493 PRKAG2Q9UGJ0 569 aa16.44■□□□□ 0.22
SQSTM1-205ENST00000464493 ZMYND8Q9ULU4 1186 aaPredicted RBP16.44■□□□□ 0.22
SQSTM1-205ENST00000464493 H3BQV1 296 aa16.43■□□□□ 0.22
SQSTM1-205ENST00000464493 SLC37A4O43826 429 aa16.43■□□□□ 0.22
SQSTM1-205ENST00000464493 CD4P01730 458 aa16.43■□□□□ 0.22
SQSTM1-205ENST00000464493 SYN1P17600 705 aa16.43■□□□□ 0.22
SQSTM1-205ENST00000464493 LARP1BQ659C4 914 aaKnown RBP16.43■□□□□ 0.22
SQSTM1-205ENST00000464493 C7orf31Q8N865 590 aa16.43■□□□□ 0.22
SQSTM1-205ENST00000464493 SLC5A5Q92911 643 aa16.43■□□□□ 0.22
SQSTM1-205ENST00000464493 RIT2Q99578 217 aa16.43■□□□□ 0.22
SQSTM1-205ENST00000464493 PRDM5Q9NQX1 630 aaPredicted RBP16.43■□□□□ 0.22
SQSTM1-205ENST00000464493 TMEM39AQ9NV64 488 aa16.43■□□□□ 0.22
SQSTM1-205ENST00000464493 B4GALT4O60513 344 aa16.42■□□□□ 0.22
SQSTM1-205ENST00000464493 GAS7O60861 476 aa16.42■□□□□ 0.22
SQSTM1-205ENST00000464493 ATG7O95352 703 aa16.42■□□□□ 0.22
SQSTM1-205ENST00000464493 CCNE2O96020 404 aa16.42■□□□□ 0.22
SQSTM1-205ENST00000464493 U2AF2P26368 475 aaKnown RBP eCLIP16.42■□□□□ 0.22
SQSTM1-205ENST00000464493 KRT76Q01546 638 aa16.42■□□□□ 0.22
SQSTM1-205ENST00000464493 LRCH2Q5VUJ6 765 aa16.42■□□□□ 0.22
SQSTM1-205ENST00000464493 ZNF746Q6NUN9 644 aaPredicted RBP16.42■□□□□ 0.22
SQSTM1-205ENST00000464493 SH3RF1Q7Z6J0 888 aa16.42■□□□□ 0.22
SQSTM1-205ENST00000464493 SESTD1Q86VW0 696 aa16.42■□□□□ 0.22
SQSTM1-205ENST00000464493 TRIM50Q86XT4 487 aa16.42■□□□□ 0.22
SQSTM1-205ENST00000464493 NOSTRINQ8IVI9 506 aa16.42■□□□□ 0.22
SQSTM1-205ENST00000464493 ETNPPLQ8TBG4 499 aa16.42■□□□□ 0.22
SQSTM1-205ENST00000464493 GLG1Q92896 1179 aa16.42■□□□□ 0.22
SQSTM1-205ENST00000464493 TRPV6Q9H1D0 765 aa16.42■□□□□ 0.22
SQSTM1-205ENST00000464493 SMARCAD1Q9H4L7 1026 aa16.42■□□□□ 0.22
SQSTM1-205ENST00000464493 AZI2Q9H6S1 392 aa16.42■□□□□ 0.22
SQSTM1-205ENST00000464493 PDLIM7Q9NR12 457 aa16.42■□□□□ 0.22
SQSTM1-205ENST00000464493 TCEAL9Q9UHQ7 104 aa16.42■□□□□ 0.22
SQSTM1-205ENST00000464493 ZNF215Q9UL58 517 aaPredicted RBP16.42■□□□□ 0.22
SQSTM1-205ENST00000464493 TRIM43BA6NCK2 446 aa16.41■□□□□ 0.22
SQSTM1-205ENST00000464493 KIF28PB7ZC32 967 aa16.41■□□□□ 0.22
SQSTM1-205ENST00000464493 LGR5O75473 907 aa16.41■□□□□ 0.22
SQSTM1-205ENST00000464493 SUPT20HL2P0C7V6 817 aa16.41■□□□□ 0.22
SQSTM1-205ENST00000464493 PRPF38BQ5VTL8 546 aaKnown RBP16.41■□□□□ 0.22
SQSTM1-205ENST00000464493 MCTP1Q6DN14 999 aa16.41■□□□□ 0.22
SQSTM1-205ENST00000464493 ABHD15Q6UXT9 468 aa16.41■□□□□ 0.22
SQSTM1-205ENST00000464493 SMAP1Q8IYB5 467 aaPredicted RBP16.41■□□□□ 0.22
SQSTM1-205ENST00000464493 GJA10Q969M2 543 aa16.41■□□□□ 0.22
SQSTM1-205ENST00000464493 TRIM43Q96BQ3 446 aaPredicted RBP16.41■□□□□ 0.22
SQSTM1-205ENST00000464493 FAM20AQ96MK3 541 aa16.41■□□□□ 0.22
SQSTM1-205ENST00000464493 TRMT13Q9NUP7 481 aaKnown RBP16.41■□□□□ 0.22
SQSTM1-205ENST00000464493 ERAP1Q9NZ08 941 aa16.41■□□□□ 0.22
SQSTM1-205ENST00000464493 HDAC6Q9UBN7 1215 aa16.41■□□□□ 0.22
SQSTM1-205ENST00000464493 IGKV6D-21A0A0A0MT36 114 aa16.4■□□□□ 0.22
SQSTM1-205ENST00000464493 KIAA0355O15063 1070 aa16.4■□□□□ 0.22
SQSTM1-205ENST00000464493 TBX3O15119 743 aa16.4■□□□□ 0.22
SQSTM1-205ENST00000464493 MARCH6O60337 910 aa16.4■□□□□ 0.22
SQSTM1-205ENST00000464493 PSMD10O75832 226 aa16.4■□□□□ 0.22
SQSTM1-205ENST00000464493 ATP2B1P20020 1258 aa16.4■□□□□ 0.22
SQSTM1-205ENST00000464493 STAT5BP51692 787 aa16.4■□□□□ 0.22
SQSTM1-205ENST00000464493 GDF6Q6KF10 455 aaPredicted RBP16.4■□□□□ 0.22
SQSTM1-205ENST00000464493 MIS18BP1Q6P0N0 1132 aa16.4■□□□□ 0.22
SQSTM1-205ENST00000464493 PLPPR4Q7Z2D5 763 aa16.4■□□□□ 0.22
SQSTM1-205ENST00000464493 PCYT2Q99447 389 aa16.4■□□□□ 0.22
SQSTM1-205ENST00000464493 TEKT3Q9BXF9 490 aa16.4■□□□□ 0.22
SQSTM1-205ENST00000464493 RNPEPQ9H4A4 650 aa16.4■□□□□ 0.22
SQSTM1-205ENST00000464493 KCNMB3Q9NPA1 279 aa16.4■□□□□ 0.22
SQSTM1-205ENST00000464493 FOXD4L1Q9NU39 408 aa16.4■□□□□ 0.22
SQSTM1-205ENST00000464493 GTF2IRD1Q9UHL9 959 aa16.4■□□□□ 0.22
SQSTM1-205ENST00000464493 TBX21Q9UL17 535 aa16.4■□□□□ 0.22
SQSTM1-205ENST00000464493 PCDHA10Q9Y5I2 948 aa16.4■□□□□ 0.22
SQSTM1-205ENST00000464493 EMSYQ7Z589 1322 aa16.4■□□□□ 0.22
SQSTM1-205ENST00000464493 WDR64B1ANS9 1081 aa16.39■□□□□ 0.21
SQSTM1-205ENST00000464493 WNT7AO00755 349 aa16.39■□□□□ 0.21
SQSTM1-205ENST00000464493 BACH1O14867 736 aa16.39■□□□□ 0.21
SQSTM1-205ENST00000464493 BAG4O95429 457 aaKnown RBP16.39■□□□□ 0.21
SQSTM1-205ENST00000464493 SMIM10L2AP0DMW4 78 aa16.39■□□□□ 0.21
SQSTM1-205ENST00000464493 SMIM10L2BP0DMW5 78 aa16.39■□□□□ 0.21
SQSTM1-205ENST00000464493 PDCP20941 246 aa16.39■□□□□ 0.21
SQSTM1-205ENST00000464493 PTGISQ16647 500 aa16.39■□□□□ 0.21
SQSTM1-205ENST00000464493 FAM160B1Q5W0V3 765 aa16.39■□□□□ 0.21
SQSTM1-205ENST00000464493 POTEDQ86YR6 584 aa16.39■□□□□ 0.21
SQSTM1-205ENST00000464493 HAS1Q92839 578 aa16.39■□□□□ 0.21
SQSTM1-205ENST00000464493 UNC45AQ9H3U1 944 aa16.39■□□□□ 0.21
SQSTM1-205ENST00000464493 NOL7Q9UMY1 257 aaKnown RBP16.39■□□□□ 0.21
SQSTM1-205ENST00000464493 NOD1Q9Y239 953 aa16.39■□□□□ 0.21
SQSTM1-205ENST00000464493 SAMM50Q9Y512 469 aa16.39■□□□□ 0.21
SQSTM1-205ENST00000464493 CHMP2AO43633 222 aa16.38■□□□□ 0.21
SQSTM1-205ENST00000464493 NEMFO60524 1076 aa16.38■□□□□ 0.21
SQSTM1-205ENST00000464493 TIMP1P01033 207 aa16.38■□□□□ 0.21
SQSTM1-205ENST00000464493 PSAPP07602 524 aa16.38■□□□□ 0.21
SQSTM1-205ENST00000464493 RAG1P15918 1043 aa16.38■□□□□ 0.21
SQSTM1-205ENST00000464493 MARK3P27448 753 aa16.38■□□□□ 0.21
SQSTM1-205ENST00000464493 SFNP31947 248 aa16.38■□□□□ 0.21
SQSTM1-205ENST00000464493 TRAPPC10P48553 1259 aa16.38■□□□□ 0.21
SQSTM1-205ENST00000464493 SLC26A2P50443 739 aa16.38■□□□□ 0.21
SQSTM1-205ENST00000464493 SWSAP1Q6NVH7 229 aa16.38■□□□□ 0.21
SQSTM1-205ENST00000464493 SLFN12Q8IYM2 578 aa16.38■□□□□ 0.21
SQSTM1-205ENST00000464493 AFAP1L1Q8TED9 768 aa16.38■□□□□ 0.21
SQSTM1-205ENST00000464493 LBHD1Q9BQE6 289 aaPredicted RBP16.38■□□□□ 0.21
SQSTM1-205ENST00000464493 ZNF302Q9NR11 478 aa16.38■□□□□ 0.21
SQSTM1-205ENST00000464493 DISC1Q9NRI5 854 aa16.38■□□□□ 0.21
SQSTM1-205ENST00000464493 PCDH10Q9P2E7 1040 aa16.38■□□□□ 0.21
SQSTM1-205ENST00000464493 KAT6AQ92794 2004 aa16.37■□□□□ 0.21
SQSTM1-205ENST00000464493 C17orf102A2RUQ5 167 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms