RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 EDEM3Q9BZQ6 932 aa12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 GANQ9H2C0 597 aa12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 TMBIM4Q9HC24 238 aa12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 TMEM59LQ9UK28 342 aa12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.89□□□□□ -0.35
PDZRN3-203ENST00000462146 KIF13BQ9NQT8 1826 aa12.88□□□□□ -0.35
PDZRN3-203ENST00000462146 FSBPO95073 299 aa12.88□□□□□ -0.35
PDZRN3-203ENST00000462146 PTK2Q05397 1052 aa12.88□□□□□ -0.35
PDZRN3-203ENST00000462146 SWT1Q5T5J6 900 aaKnown RBP12.88□□□□□ -0.35
PDZRN3-203ENST00000462146 SPTY2D1Q68D10 685 aaPredicted RBP12.88□□□□□ -0.35
PDZRN3-203ENST00000462146 TRIM59Q8IWR1 403 aa12.88□□□□□ -0.35
PDZRN3-203ENST00000462146 WHAMMQ8TF30 809 aa12.88□□□□□ -0.35
PDZRN3-203ENST00000462146 HAS1Q92839 578 aa12.88□□□□□ -0.35
PDZRN3-203ENST00000462146 RTFDC1Q9BY42 306 aaPredicted RBP12.88□□□□□ -0.35
PDZRN3-203ENST00000462146 DDX47Q9H0S4 455 aaKnown RBP12.88□□□□□ -0.35
PDZRN3-203ENST00000462146 TAF1DQ9H5J8 278 aaPredicted RBP12.88□□□□□ -0.35
PDZRN3-203ENST00000462146 TNRC6CQ9HCJ0 1690 aaKnown RBP12.88□□□□□ -0.35
PDZRN3-203ENST00000462146 ATXN2Q99700 1313 aaKnown RBP12.88□□□□□ -0.35
PDZRN3-203ENST00000462146 SLC9A1P19634 815 aa12.88□□□□□ -0.35
PDZRN3-203ENST00000462146 BTDP43251 543 aa12.88□□□□□ -0.35
PDZRN3-203ENST00000462146 ADCY7P51828 1080 aa12.88□□□□□ -0.35
PDZRN3-203ENST00000462146 ASIC2Q16515 512 aa12.88□□□□□ -0.35
PDZRN3-203ENST00000462146 QPCTQ16769 361 aa12.88□□□□□ -0.35
PDZRN3-203ENST00000462146 ZNF571Q7Z3V5 609 aaPredicted RBP12.88□□□□□ -0.35
PDZRN3-203ENST00000462146 PROM2Q8N271 834 aa12.88□□□□□ -0.35
PDZRN3-203ENST00000462146 ANKRD2Q9GZV1 360 aa12.88□□□□□ -0.35
PDZRN3-203ENST00000462146 CD248Q9HCU0 757 aa12.88□□□□□ -0.35
PDZRN3-203ENST00000462146 NHSQ6T4R5 1651 aa12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 DCDC2CA8MYV0 355 aa12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 H0YGN5 161 aa12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 CEP104O60308 925 aa12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 KIF4AO95239 1232 aa12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 ITGA4P13612 1032 aa12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 TNNC1P63316 161 aa12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 SLC10A5Q5PT55 438 aa12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 C16orf86Q6ZW13 317 aa12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 NEDD1Q8NHV4 660 aa12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 SYN2Q92777 582 aaPredicted RBP12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 NCAPGQ9BPX3 1015 aa12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 ISCUQ9H1K1 167 aa12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 GPCPD1Q9NPB8 672 aa12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 BCCIPQ9P287 314 aaKnown RBP eCLIP12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 NFS1Q9Y697 457 aa12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 HMGB1P1B2RPK0 211 aaPredicted RBP12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 PDHBP11177 359 aa12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 HSPA1LP34931 641 aa12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 ZNF844Q08AG5 666 aa12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 PSMD2Q13200 908 aa12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 SF3B2Q13435 895 aaKnown RBP12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 RPS6KA1Q15418 735 aa12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 EMC10Q5UCC4 262 aa12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 NBPF5PQ86XG9 351 aaPredicted RBP12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 SCFD1Q8WVM8 642 aa12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 RIOX1Q9H6W3 641 aa12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 ANKIB1Q9P2G1 1089 aa12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 CNOT8Q9UFF9 292 aaKnown RBP12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 AJAP1Q9UKB5 411 aaPredicted RBP12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 PCDHA2Q9Y5H9 948 aa12.87□□□□□ -0.35
PDZRN3-203ENST00000462146 PPP1R11O60927 126 aaPredicted RBP12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 BAG3O95817 575 aa12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 TM4SF1P30408 202 aa12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 CASP5P51878 434 aa12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 KCNH2Q12809 1159 aa12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 NFIXQ14938 502 aa12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 CHADLQ6NUI6 762 aa12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 TAF4BQ92750 862 aa12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 CYFIP2Q96F07 1278 aa12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 CABS1Q96KC9 395 aa12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 ZHX3Q9H4I2 956 aa12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 PLCB1Q9NQ66 1216 aa12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 ESYT2A0FGR8 921 aa12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 POTEB3A0JP26 581 aa12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 A6NNZ2 444 aa12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 POTECB2RU33 542 aa12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 FAM107AO95990 144 aa12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 CTNNA1P35221 906 aaKnown RBP12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 PDIA5Q14554 519 aa12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 TUBB8Q3ZCM7 444 aa12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 POTEBQ6S5H4 581 aa12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 CCDC13Q8IYE1 715 aa12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 PAGR1Q9BTK6 254 aa12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 KCTD10Q9H3F6 313 aa12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 GEMIN8Q9NWZ8 242 aaKnown RBP12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 AIPL1Q9NZN9 384 aa12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 DDX25Q9UHL0 483 aaKnown RBP12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 FBXL5Q9UKA1 691 aa12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 KIAA1024Q9UPX6 916 aa12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 NOC2LQ9Y3T9 749 aaKnown RBP12.86□□□□□ -0.35
PDZRN3-203ENST00000462146 EPS15P42566 896 aa12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 ADAM9Q13443 819 aa12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 DPY19L2P1Q6NXN4 242 aa12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 IRF2BP2Q7Z5L9 587 aa12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 TEX11Q8IYF3 940 aa12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 METTL13Q8N6R0 699 aa12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 RBM46Q8TBY0 533 aaKnown RBP12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 SCFD2Q8WU76 684 aa12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 UBLCP1Q8WVY7 318 aaPredicted RBP12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 JPH2Q9BR39 696 aaPredicted RBP12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 CELF4Q9BZC1 486 aaKnown RBP12.85□□□□□ -0.35
PDZRN3-203ENST00000462146 RAB34Q9BZG1 259 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms