RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 SLC35F4A4IF30 521 aa6.61□□□□□ -1.35
SBDSP1-204ENST00000453858 RBAK-RBAKDNI3L0D1 243 aa6.61□□□□□ -1.35
SBDSP1-204ENST00000453858 ASNSP08243 561 aa6.61□□□□□ -1.35
SBDSP1-204ENST00000453858 ATF7P17544 494 aaPredicted RBP6.61□□□□□ -1.35
SBDSP1-204ENST00000453858 LORP23490 312 aaPredicted RBP6.61□□□□□ -1.35
SBDSP1-204ENST00000453858 MSX1P28360 303 aa6.61□□□□□ -1.35
SBDSP1-204ENST00000453858 PRDX5P30044 214 aa6.61□□□□□ -1.35
SBDSP1-204ENST00000453858 PTSQ03393 145 aa6.61□□□□□ -1.35
SBDSP1-204ENST00000453858 C11orf91Q3C1V1 193 aa6.61□□□□□ -1.35
SBDSP1-204ENST00000453858 LARP1BQ659C4 914 aaKnown RBP6.61□□□□□ -1.35
SBDSP1-204ENST00000453858 UNQ6494/PRO21346Q6UXR6 183 aa6.61□□□□□ -1.35
SBDSP1-204ENST00000453858 LDHAL6AQ6ZMR3 332 aa6.61□□□□□ -1.35
SBDSP1-204ENST00000453858 METTL16Q86W50 562 aaKnown RBP6.61□□□□□ -1.35
SBDSP1-204ENST00000453858 CRISPLD1Q9H336 500 aa6.61□□□□□ -1.35
SBDSP1-204ENST00000453858 MROH8Q9H579 483 aa6.61□□□□□ -1.35
SBDSP1-204ENST00000453858 PARD6AQ9NPB6 346 aa6.61□□□□□ -1.35
SBDSP1-204ENST00000453858 INCENPQ9NQS7 918 aa6.61□□□□□ -1.35
SBDSP1-204ENST00000453858 TRMT13Q9NUP7 481 aaKnown RBP6.61□□□□□ -1.35
SBDSP1-204ENST00000453858 ANKFY1Q9P2R3 1169 aa6.61□□□□□ -1.35
SBDSP1-204ENST00000453858 WASF3Q9UPY6 502 aa6.61□□□□□ -1.35
SBDSP1-204ENST00000453858 NUDCQ9Y266 331 aa6.61□□□□□ -1.35
SBDSP1-204ENST00000453858 MAP3K2Q9Y2U5 619 aa6.61□□□□□ -1.35
SBDSP1-204ENST00000453858 MGAQ8IWI9 3026 aa6.61□□□□□ -1.35
SBDSP1-204ENST00000453858 ATAD5Q96QE3 1844 aa6.6□□□□□ -1.35
SBDSP1-204ENST00000453858 DNHD1Q96M86 4753 aa6.6□□□□□ -1.35
SBDSP1-204ENST00000453858 CABYRO75952 493 aa6.6□□□□□ -1.35
SBDSP1-204ENST00000453858 PGK2P07205 417 aa6.6□□□□□ -1.35
SBDSP1-204ENST00000453858 VSIG8P0DPA2 414 aa6.6□□□□□ -1.35
SBDSP1-204ENST00000453858 HOXD8P13378 290 aaPredicted RBP6.6□□□□□ -1.35
SBDSP1-204ENST00000453858 BRD2P25440 801 aaKnown RBP6.6□□□□□ -1.35
SBDSP1-204ENST00000453858 GMPRP36959 345 aa6.6□□□□□ -1.35
SBDSP1-204ENST00000453858 RHBDL3P58872 404 aa6.6□□□□□ -1.35
SBDSP1-204ENST00000453858 IFIT5Q13325 482 aaKnown RBP6.6□□□□□ -1.35
SBDSP1-204ENST00000453858 CAMK1Q14012 370 aa6.6□□□□□ -1.35
SBDSP1-204ENST00000453858 EFHC2Q5JST6 749 aa6.6□□□□□ -1.35
SBDSP1-204ENST00000453858 MAMDC4Q6UXC1 1216 aa6.6□□□□□ -1.35
SBDSP1-204ENST00000453858 NLRP8Q86W28 1048 aa6.6□□□□□ -1.35
SBDSP1-204ENST00000453858 RHPN1Q8TCX5 695 aa6.6□□□□□ -1.35
SBDSP1-204ENST00000453858 HELQQ8TDG4 1101 aa6.6□□□□□ -1.35
SBDSP1-204ENST00000453858 SETD2Q9BYW2 2564 aaPredicted RBP6.6□□□□□ -1.35
SBDSP1-204ENST00000453858 COL11A1P12107 1806 aaPredicted RBP6.6□□□□□ -1.35
SBDSP1-204ENST00000453858 SALL1Q9NSC2 1324 aa6.59□□□□□ -1.35
SBDSP1-204ENST00000453858 LRBAP50851 2863 aa6.59□□□□□ -1.35
SBDSP1-204ENST00000453858 TM4SF5O14894 197 aa6.59□□□□□ -1.35
SBDSP1-204ENST00000453858 LINC00271P0C7V0 271 aa6.59□□□□□ -1.35
SBDSP1-204ENST00000453858 SP9P0CG40 484 aa6.59□□□□□ -1.35
SBDSP1-204ENST00000453858 VCAM1P19320 739 aa6.59□□□□□ -1.35
SBDSP1-204ENST00000453858 TXLNAP40222 546 aa6.59□□□□□ -1.35
SBDSP1-204ENST00000453858 KCNJ6P48051 423 aa6.59□□□□□ -1.35
SBDSP1-204ENST00000453858 BEX3Q00994 111 aa6.59□□□□□ -1.35
SBDSP1-204ENST00000453858 ARSJQ5FYB0 599 aaPredicted RBP6.59□□□□□ -1.35
SBDSP1-204ENST00000453858 IER5Q5VY09 327 aa6.59□□□□□ -1.35
SBDSP1-204ENST00000453858 FIGNL1Q6PIW4 674 aa6.59□□□□□ -1.35
SBDSP1-204ENST00000453858 KSR2Q6VAB6 950 aa6.59□□□□□ -1.35
SBDSP1-204ENST00000453858 WDR66Q8TBY9 1149 aa6.59□□□□□ -1.35
SBDSP1-204ENST00000453858 SAMD11Q96NU1 681 aa6.59□□□□□ -1.35
SBDSP1-204ENST00000453858 MKNK1Q9BUB5 465 aa6.59□□□□□ -1.35
SBDSP1-204ENST00000453858 PUS3Q9BZE2 481 aaKnown RBP6.59□□□□□ -1.35
SBDSP1-204ENST00000453858 FTOQ9C0B1 505 aaKnown RBP eCLIP6.59□□□□□ -1.35
SBDSP1-204ENST00000453858 DNAJC18Q9H819 358 aa6.59□□□□□ -1.35
SBDSP1-204ENST00000453858 SORCS3Q9UPU3 1222 aa6.59□□□□□ -1.35
SBDSP1-204ENST00000453858 INSL6Q9Y581 213 aa6.59□□□□□ -1.35
SBDSP1-204ENST00000453858 UTP20O75691 2785 aaKnown RBP6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 MROH5Q6ZUA9 1318 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 CLSPNQ9HAW4 1339 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 NF1P21359 2839 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 PI4KAP2A4QPH2 592 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 GRM6O15303 877 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 FAM13AO94988 1023 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 GLP2RO95838 553 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 FCER1AP12319 257 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 PSMC6P62333 389 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 CCDC144BQ3MJ40 725 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 COX20Q5RI15 118 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 DUSP27Q5VZP5 1158 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 ALKBH2Q6NS38 261 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 VPS37DQ86XT2 251 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 TMEM192Q8IY95 271 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 TRIM22Q8IYM9 498 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 MAML2Q8IZL2 1156 aaPredicted RBP6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 MSL3Q8N5Y2 521 aaKnown RBP6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 CCDC155Q8N6L0 562 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 VGLL2Q8N8G2 317 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 PI4KAP1Q8N8J0 262 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 ZSCAN1Q8NBB4 408 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 PIK3R5Q8WYR1 880 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 MAP4K1Q92918 833 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 KATNBL1Q9H079 304 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 SIL1Q9H173 461 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 IGFLR1Q9H665 355 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 GINM1Q9NU53 330 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 FAM13BQ9NYF5 915 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 STIM2Q9P246 746 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 HERC5Q9UII4 1024 aaKnown RBP6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 CNPY2Q9Y2B0 182 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 ADAMTS20P59510 1910 aa6.58□□□□□ -1.36
SBDSP1-204ENST00000453858 ITPR2Q14571 2701 aa6.57□□□□□ -1.36
SBDSP1-204ENST00000453858 ABHD14A-ACY1A0A1B0GW23 586 aa6.57□□□□□ -1.36
SBDSP1-204ENST00000453858 A0A1W2PNR3 127 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms