RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 EP400NLQ6ZTU2 488 aa6.51□□□□□ -1.37
SDCBP-205ENST00000447267 CCDC84Q86UT8 332 aaPredicted RBP6.51□□□□□ -1.37
SDCBP-205ENST00000447267 DCLK2Q8N568 766 aa6.51□□□□□ -1.37
SDCBP-205ENST00000447267 C2CD4AQ8NCU7 369 aaPredicted RBP6.51□□□□□ -1.37
SDCBP-205ENST00000447267 GDPD5Q8WTR4 605 aa6.51□□□□□ -1.37
SDCBP-205ENST00000447267 CD209Q9NNX6 404 aa6.51□□□□□ -1.37
SDCBP-205ENST00000447267 MINPP1Q9UNW1 487 aa6.51□□□□□ -1.37
SDCBP-205ENST00000447267 MTMR7Q9Y216 660 aa6.51□□□□□ -1.37
SDCBP-205ENST00000447267 SLC45A1Q9Y2W3 748 aa6.51□□□□□ -1.37
SDCBP-205ENST00000447267 ANKRD36CQ5JPF3 1778 aa6.51□□□□□ -1.37
SDCBP-205ENST00000447267 NAV2Q8IVL1 2488 aa6.51□□□□□ -1.37
SDCBP-205ENST00000447267 ASH1LQ9NR48 2969 aaKnown RBP6.5□□□□□ -1.37
SDCBP-205ENST00000447267 TRIM75PA6NK02 468 aa6.5□□□□□ -1.37
SDCBP-205ENST00000447267 GPR182O15218 404 aa6.5□□□□□ -1.37
SDCBP-205ENST00000447267 F13BP05160 661 aa6.5□□□□□ -1.37
SDCBP-205ENST00000447267 ADMP35318 185 aa6.5□□□□□ -1.37
SDCBP-205ENST00000447267 PCDH1Q08174 1060 aa6.5□□□□□ -1.37
SDCBP-205ENST00000447267 TMEM67Q5HYA8 995 aa6.5□□□□□ -1.37
SDCBP-205ENST00000447267 KIAA0319Q5VV43 1072 aa6.5□□□□□ -1.37
SDCBP-205ENST00000447267 MFSD14CQ5VZR4 134 aa6.5□□□□□ -1.37
SDCBP-205ENST00000447267 PSRC1Q6PGN9 363 aaPredicted RBP6.5□□□□□ -1.37
SDCBP-205ENST00000447267 LRP10Q7Z4F1 713 aa6.5□□□□□ -1.37
SDCBP-205ENST00000447267 KRTAP19-1Q8IUB9 90 aa6.5□□□□□ -1.37
SDCBP-205ENST00000447267 JARID2Q92833 1246 aaPredicted RBP6.5□□□□□ -1.37
SDCBP-205ENST00000447267 LIN7BQ9HAP6 207 aa6.5□□□□□ -1.37
SDCBP-205ENST00000447267 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.5□□□□□ -1.37
SDCBP-205ENST00000447267 PRKAG3Q9UGI9 489 aa6.5□□□□□ -1.37
SDCBP-205ENST00000447267 ZNF112Q9UJU3 913 aa6.5□□□□□ -1.37
SDCBP-205ENST00000447267 HIF3AQ9Y2N7 669 aa6.5□□□□□ -1.37
SDCBP-205ENST00000447267 SLC4A7Q9Y6M7 1214 aa6.5□□□□□ -1.37
SDCBP-205ENST00000447267 DMDP11532 3685 aa6.5□□□□□ -1.37
SDCBP-205ENST00000447267 ZFYVE26Q68DK2 2539 aa6.49□□□□□ -1.37
SDCBP-205ENST00000447267 DCDC2CA8MYV0 355 aa6.49□□□□□ -1.37
SDCBP-205ENST00000447267 WDR64B1ANS9 1081 aa6.49□□□□□ -1.37
SDCBP-205ENST00000447267 SNAP23O00161 211 aa6.49□□□□□ -1.37
SDCBP-205ENST00000447267 MSCO60682 206 aa6.49□□□□□ -1.37
SDCBP-205ENST00000447267 ATP2A2P16615 1042 aaKnown RBP6.49□□□□□ -1.37
SDCBP-205ENST00000447267 CYP2C18P33260 490 aa6.49□□□□□ -1.37
SDCBP-205ENST00000447267 RGS2P41220 211 aa6.49□□□□□ -1.37
SDCBP-205ENST00000447267 DCAF15Q66K64 600 aa6.49□□□□□ -1.37
SDCBP-205ENST00000447267 MCTP1Q6DN14 999 aa6.49□□□□□ -1.37
SDCBP-205ENST00000447267 LRSAM1Q6UWE0 723 aa6.49□□□□□ -1.37
SDCBP-205ENST00000447267 NFXL1Q6ZNB6 911 aa6.49□□□□□ -1.37
SDCBP-205ENST00000447267 DTX1Q86Y01 620 aa6.49□□□□□ -1.37
SDCBP-205ENST00000447267 ANKRD18AQ8IVF6 992 aa6.49□□□□□ -1.37
SDCBP-205ENST00000447267 GLYCTKQ8IVS8 523 aa6.49□□□□□ -1.37
SDCBP-205ENST00000447267 TMEM199Q8N511 208 aa6.49□□□□□ -1.37
SDCBP-205ENST00000447267 C12orf50Q8NA57 414 aaPredicted RBP6.49□□□□□ -1.37
SDCBP-205ENST00000447267 RETREG2Q8NC44 543 aa6.49□□□□□ -1.37
SDCBP-205ENST00000447267 NEK9Q8TD19 979 aa6.49□□□□□ -1.37
SDCBP-205ENST00000447267 FBLIM1Q8WUP2 373 aa6.49□□□□□ -1.37
SDCBP-205ENST00000447267 GATA6Q92908 595 aa6.49□□□□□ -1.37
SDCBP-205ENST00000447267 CLEC4MQ9H2X3 399 aaPredicted RBP6.49□□□□□ -1.37
SDCBP-205ENST00000447267 IL23AQ9NPF7 189 aa6.49□□□□□ -1.37
SDCBP-205ENST00000447267 TBX21Q9UL17 535 aa6.49□□□□□ -1.37
SDCBP-205ENST00000447267 AFG3L2Q9Y4W6 797 aa6.49□□□□□ -1.37
SDCBP-205ENST00000447267 EP300Q09472 2414 aaPredicted RBP6.49□□□□□ -1.37
SDCBP-205ENST00000447267 GAS2O43903 313 aaKnown RBP6.48□□□□□ -1.37
SDCBP-205ENST00000447267 KRT38O76015 456 aa6.48□□□□□ -1.37
SDCBP-205ENST00000447267 MAOBP27338 520 aa6.48□□□□□ -1.37
SDCBP-205ENST00000447267 GCLCP48506 637 aaPredicted RBP6.48□□□□□ -1.37
SDCBP-205ENST00000447267 HSP90AB3PQ58FF7 597 aa6.48□□□□□ -1.37
SDCBP-205ENST00000447267 PRAMEF19Q5SWL8 479 aa6.48□□□□□ -1.37
SDCBP-205ENST00000447267 KRTAP1-3Q8IUG1 177 aa6.48□□□□□ -1.37
SDCBP-205ENST00000447267 XAGE3Q8WTP9 111 aa6.48□□□□□ -1.37
SDCBP-205ENST00000447267 SOCS4Q8WXH5 440 aa6.48□□□□□ -1.37
SDCBP-205ENST00000447267 EDC3Q96F86 508 aaKnown RBP6.48□□□□□ -1.37
SDCBP-205ENST00000447267 ASIC4Q96FT7 647 aa6.48□□□□□ -1.37
SDCBP-205ENST00000447267 PHACTR3Q96KR7 559 aa6.48□□□□□ -1.37
SDCBP-205ENST00000447267 ARID3AQ99856 593 aa6.48□□□□□ -1.37
SDCBP-205ENST00000447267 PORCNQ9H237 461 aa6.48□□□□□ -1.37
SDCBP-205ENST00000447267 TXNRD2Q9NNW7 524 aa6.48□□□□□ -1.37
SDCBP-205ENST00000447267 NPHS2Q9NP85 383 aa6.48□□□□□ -1.37
SDCBP-205ENST00000447267 BRPF3Q9ULD4 1205 aa6.48□□□□□ -1.37
SDCBP-205ENST00000447267 AGTPBP1Q9UPW5 1226 aa6.48□□□□□ -1.37
SDCBP-205ENST00000447267 BRWD1Q9NSI6 2320 aa6.47□□□□□ -1.37
SDCBP-205ENST00000447267 ADH5P11766 374 aa6.47□□□□□ -1.37
SDCBP-205ENST00000447267 EIF2S2P20042 333 aaKnown RBP6.47□□□□□ -1.37
SDCBP-205ENST00000447267 CRKP46108 304 aa6.47□□□□□ -1.37
SDCBP-205ENST00000447267 GP2P55259 537 aaKnown RBP6.47□□□□□ -1.37
SDCBP-205ENST00000447267 ATP2B2Q01814 1243 aa6.47□□□□□ -1.37
SDCBP-205ENST00000447267 SOX4Q06945 474 aaPredicted RBP6.47□□□□□ -1.37
SDCBP-205ENST00000447267 CLUL1Q15846 466 aa6.47□□□□□ -1.37
SDCBP-205ENST00000447267 EXOSC6Q5RKV6 272 aaKnown RBP6.47□□□□□ -1.37
SDCBP-205ENST00000447267 NOL9Q5SY16 702 aaKnown RBP6.47□□□□□ -1.37
SDCBP-205ENST00000447267 MCTP2Q6DN12 878 aa6.47□□□□□ -1.37
SDCBP-205ENST00000447267 GPR142Q7Z601 462 aa6.47□□□□□ -1.37
SDCBP-205ENST00000447267 TMEM105Q8N8V8 129 aa6.47□□□□□ -1.37
SDCBP-205ENST00000447267 GLIS3Q8NEA6 775 aa6.47□□□□□ -1.37
SDCBP-205ENST00000447267 APBA2Q99767 749 aa6.47□□□□□ -1.37
SDCBP-205ENST00000447267 ASCC2Q9H1I8 757 aaPredicted RBP6.47□□□□□ -1.37
SDCBP-205ENST00000447267 MTIF3Q9H2K0 278 aaKnown RBP6.47□□□□□ -1.37
SDCBP-205ENST00000447267 ABCB6Q9NP58 842 aa6.47□□□□□ -1.37
SDCBP-205ENST00000447267 MTUS1Q9ULD2 1270 aa6.47□□□□□ -1.37
SDCBP-205ENST00000447267 TTF2Q9UNY4 1162 aaKnown RBP6.47□□□□□ -1.37
SDCBP-205ENST00000447267 UTYO14607 1347 aa6.47□□□□□ -1.37
SDCBP-205ENST00000447267 DMXL1Q9Y485 3027 aa6.47□□□□□ -1.37
SDCBP-205ENST00000447267 A0A1W2PQ45 241 aaPredicted RBP6.46□□□□□ -1.38
SDCBP-205ENST00000447267 A0A1W2PQY0 241 aa6.46□□□□□ -1.38
SDCBP-205ENST00000447267 B3GALT4O96024 378 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms