RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 MICAL1Q8TDZ2 1067 aa15.27■□□□□ 0.04
VPS52-212ENST00000445902 RIOK1Q9BRS2 568 aaKnown RBP15.27■□□□□ 0.04
VPS52-212ENST00000445902 AGAP1Q9UPQ3 857 aa15.27■□□□□ 0.04
VPS52-212ENST00000445902 C15orf41Q9Y2V0 281 aa15.27■□□□□ 0.04
VPS52-212ENST00000445902 CD2APQ9Y5K6 639 aa15.27■□□□□ 0.04
VPS52-212ENST00000445902 PCDH11XQ9BZA7 1347 aa15.27■□□□□ 0.03
VPS52-212ENST00000445902 PCDH11YQ9BZA8 1340 aa15.27■□□□□ 0.03
VPS52-212ENST00000445902 F8VZ95 297 aa15.27■□□□□ 0.03
VPS52-212ENST00000445902 DIAPH2O60879 1101 aa15.27■□□□□ 0.03
VPS52-212ENST00000445902 PAEPP09466 180 aa15.27■□□□□ 0.03
VPS52-212ENST00000445902 NLRP3Q96P20 1036 aa15.27■□□□□ 0.03
VPS52-212ENST00000445902 FAM129AQ9BZQ8 928 aa15.27■□□□□ 0.03
VPS52-212ENST00000445902 LUC7LQ9NQ29 371 aaKnown RBP15.27■□□□□ 0.03
VPS52-212ENST00000445902 ABCF3Q9NUQ8 709 aa15.27■□□□□ 0.03
VPS52-212ENST00000445902 TBC1D7Q9P0N9 293 aa15.27■□□□□ 0.03
VPS52-212ENST00000445902 A8MUI8 341 aa15.26■□□□□ 0.03
VPS52-212ENST00000445902 ERVV-2B6SEH9 535 aa15.26■□□□□ 0.03
VPS52-212ENST00000445902 CLSTN1O94985 981 aa15.26■□□□□ 0.03
VPS52-212ENST00000445902 OR52Z1P0C646 297 aa15.26■□□□□ 0.03
VPS52-212ENST00000445902 COPB2P35606 906 aa15.26■□□□□ 0.03
VPS52-212ENST00000445902 ERMARDQ5T6L9 678 aa15.26■□□□□ 0.03
VPS52-212ENST00000445902 LRRC55Q6ZSA7 311 aa15.26■□□□□ 0.03
VPS52-212ENST00000445902 ANKS4BQ8N8V4 417 aa15.26■□□□□ 0.03
VPS52-212ENST00000445902 SCFD2Q8WU76 684 aa15.26■□□□□ 0.03
VPS52-212ENST00000445902 HOOK2Q96ED9 719 aa15.26■□□□□ 0.03
VPS52-212ENST00000445902 VIMP08670 466 aaKnown RBP15.26■□□□□ 0.03
VPS52-212ENST00000445902 GHRP10912 638 aa15.26■□□□□ 0.03
VPS52-212ENST00000445902 TXKP42681 527 aa15.26■□□□□ 0.03
VPS52-212ENST00000445902 SARNPP82979 210 aaKnown RBP15.26■□□□□ 0.03
VPS52-212ENST00000445902 ARMC9Q7Z3E5 817 aa15.26■□□□□ 0.03
VPS52-212ENST00000445902 METTL13Q8N6R0 699 aa15.26■□□□□ 0.03
VPS52-212ENST00000445902 ZNF483Q8TF39 744 aaPredicted RBP15.26■□□□□ 0.03
VPS52-212ENST00000445902 ZNF570Q96NI8 536 aa15.26■□□□□ 0.03
VPS52-212ENST00000445902 MMTAG2Q9BU76 263 aaKnown RBP15.26■□□□□ 0.03
VPS52-212ENST00000445902 CEP72Q9P209 647 aa15.26■□□□□ 0.03
VPS52-212ENST00000445902 TRPC6Q9Y210 931 aa15.26■□□□□ 0.03
VPS52-212ENST00000445902 TRAF5O00463 557 aa15.25■□□□□ 0.03
VPS52-212ENST00000445902 SLC8A3P57103 927 aa15.25■□□□□ 0.03
VPS52-212ENST00000445902 MTMR3Q13615 1198 aa15.25■□□□□ 0.03
VPS52-212ENST00000445902 MAEAQ7L5Y9 396 aa15.25■□□□□ 0.03
VPS52-212ENST00000445902 SPICE1Q8N0Z3 855 aa15.25■□□□□ 0.03
VPS52-212ENST00000445902 KIF2BQ8N4N8 673 aa15.25■□□□□ 0.03
VPS52-212ENST00000445902 EBF2Q9HAK2 575 aa15.25■□□□□ 0.03
VPS52-212ENST00000445902 SWAP70Q9UH65 585 aa15.25■□□□□ 0.03
VPS52-212ENST00000445902 CASZ1Q86V15 1759 aa15.25■□□□□ 0.03
VPS52-212ENST00000445902 CICQ96RK0 1608 aaPredicted RBP15.25■□□□□ 0.03
VPS52-212ENST00000445902 PGRMC1O00264 195 aaKnown RBP15.25■□□□□ 0.03
VPS52-212ENST00000445902 GOLGA8HP0CJ92 632 aa15.25■□□□□ 0.03
VPS52-212ENST00000445902 IRX1P78414 480 aaPredicted RBP15.25■□□□□ 0.03
VPS52-212ENST00000445902 AMPD3Q01432 767 aa15.25■□□□□ 0.03
VPS52-212ENST00000445902 SV2BQ7L1I2 683 aa15.25■□□□□ 0.03
VPS52-212ENST00000445902 RNF217Q8TC41 542 aa15.25■□□□□ 0.03
VPS52-212ENST00000445902 SPAG5Q96R06 1193 aa15.25■□□□□ 0.03
VPS52-212ENST00000445902 PRMT1Q99873 361 aaKnown RBP15.25■□□□□ 0.03
VPS52-212ENST00000445902 CCDC113Q9H0I3 377 aa15.25■□□□□ 0.03
VPS52-212ENST00000445902 M0R2N6 131 aa15.24■□□□□ 0.03
VPS52-212ENST00000445902 TMED8Q6PL24 325 aaPredicted RBP15.24■□□□□ 0.03
VPS52-212ENST00000445902 EGFL6Q8IUX8 553 aa15.24■□□□□ 0.03
VPS52-212ENST00000445902 MAB21L3Q8N8X9 362 aa15.24■□□□□ 0.03
VPS52-212ENST00000445902 ZNF317Q96PQ6 595 aaPredicted RBP15.24■□□□□ 0.03
VPS52-212ENST00000445902 FAM167BQ9BTA0 163 aa15.24■□□□□ 0.03
VPS52-212ENST00000445902 CUEDC2Q9H467 287 aa15.24■□□□□ 0.03
VPS52-212ENST00000445902 SLC12A4Q9UP95 1085 aa15.24■□□□□ 0.03
VPS52-212ENST00000445902 STK38LQ9Y2H1 464 aa15.24■□□□□ 0.03
VPS52-212ENST00000445902 GRIK3Q13003 919 aa15.24■□□□□ 0.03
VPS52-212ENST00000445902 ZKSCAN8Q15776 578 aaPredicted RBP15.24■□□□□ 0.03
VPS52-212ENST00000445902 SLC35G1Q2M3R5 365 aa15.24■□□□□ 0.03
VPS52-212ENST00000445902 UBAP2Q5T6F2 1119 aaKnown RBP15.24■□□□□ 0.03
VPS52-212ENST00000445902 RCSD1Q6JBY9 416 aa15.24■□□□□ 0.03
VPS52-212ENST00000445902 NELFCDQ8IXH7 590 aa15.24■□□□□ 0.03
VPS52-212ENST00000445902 ARMC2Q8NEN0 867 aa15.24■□□□□ 0.03
VPS52-212ENST00000445902 CALML4Q96GE6 196 aa15.24■□□□□ 0.03
VPS52-212ENST00000445902 ARAP2Q8WZ64 1704 aa15.24■□□□□ 0.03
VPS52-212ENST00000445902 DLEC1Q9Y238 1755 aa15.24■□□□□ 0.03
VPS52-212ENST00000445902 ACTN1P12814 892 aa15.24■□□□□ 0.03
VPS52-212ENST00000445902 KIF5BP33176 963 aa15.24■□□□□ 0.03
VPS52-212ENST00000445902 SLCO1A2P46721 670 aa15.24■□□□□ 0.03
VPS52-212ENST00000445902 USP11P51784 963 aa15.24■□□□□ 0.03
VPS52-212ENST00000445902 IFI35P80217 286 aaPredicted RBP15.24■□□□□ 0.03
VPS52-212ENST00000445902 P3H4Q92791 437 aa15.24■□□□□ 0.03
VPS52-212ENST00000445902 ZBTB10Q96DT7 871 aa15.24■□□□□ 0.03
VPS52-212ENST00000445902 NR2E1Q9Y466 385 aa15.24■□□□□ 0.03
VPS52-212ENST00000445902 COL18A1P39060 1754 aa15.24■□□□□ 0.03
VPS52-212ENST00000445902 A0A0G2JS52 829 aa15.23■□□□□ 0.03
VPS52-212ENST00000445902 UBOX5O94941 541 aa15.23■□□□□ 0.03
VPS52-212ENST00000445902 INHBEP58166 350 aa15.23■□□□□ 0.03
VPS52-212ENST00000445902 PTK2Q05397 1052 aa15.23■□□□□ 0.03
VPS52-212ENST00000445902 ASIC2Q16515 512 aa15.23■□□□□ 0.03
VPS52-212ENST00000445902 TRPM8Q7Z2W7 1104 aa15.23■□□□□ 0.03
VPS52-212ENST00000445902 PARD3BQ8TEW8 1205 aa15.23■□□□□ 0.03
VPS52-212ENST00000445902 UIMC1Q96RL1 719 aa15.23■□□□□ 0.03
VPS52-212ENST00000445902 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.23■□□□□ 0.036e-8■■■□□ 18.3
VPS52-212ENST00000445902 YIPF3Q9GZM5 350 aa15.23■□□□□ 0.03
VPS52-212ENST00000445902 BLOC1S4Q9NUP1 217 aa15.23■□□□□ 0.03
VPS52-212ENST00000445902 TMOD3Q9NYL9 352 aa15.23■□□□□ 0.03
VPS52-212ENST00000445902 SAMD15Q9P1V8 674 aa15.23■□□□□ 0.03
VPS52-212ENST00000445902 FGFR1OPO95684 399 aaKnown RBP15.23■□□□□ 0.03
VPS52-212ENST00000445902 MYBL1P10243 752 aa15.23■□□□□ 0.03
VPS52-212ENST00000445902 ALDH5A1P51649 535 aaPredicted RBP15.23■□□□□ 0.03
VPS52-212ENST00000445902 CCDC38Q502W7 563 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms