RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 TSGA10IPQ3SY00 556 aa24.11■■□□□ 1.45
VSX1-206ENST00000444511 PLEKHG4Q58EX7 1191 aa24.11■■□□□ 1.45
VSX1-206ENST00000444511 WWC2Q6AWC2 1192 aa24.11■■□□□ 1.45
VSX1-206ENST00000444511 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.11■■□□□ 1.45
VSX1-206ENST00000444511 RASEFQ8IZ41 740 aa24.11■■□□□ 1.45
VSX1-206ENST00000444511 LMBR1Q8WVP7 490 aa24.11■■□□□ 1.45
VSX1-206ENST00000444511 SEPT1Q8WYJ6 367 aa24.11■■□□□ 1.45
VSX1-206ENST00000444511 SEPT8Q92599 483 aa24.11■■□□□ 1.45
VSX1-206ENST00000444511 BRPF3Q9ULD4 1205 aa24.11■■□□□ 1.45
VSX1-206ENST00000444511 SPTBN5Q9NRC6 3674 aaKnown RBP24.11■■□□□ 1.45
VSX1-206ENST00000444511 NRCAMQ92823 1304 aa24.1■■□□□ 1.45
VSX1-206ENST00000444511 ADCK5Q3MIX3 580 aa24.1■■□□□ 1.45
VSX1-206ENST00000444511 KRT40Q6A162 431 aa24.1■■□□□ 1.45
VSX1-206ENST00000444511 MYOCDQ8IZQ8 938 aa24.1■■□□□ 1.45
VSX1-206ENST00000444511 JADE2Q9NQC1 790 aa24.1■■□□□ 1.45
VSX1-206ENST00000444511 PTPRSQ13332 1948 aa24.1■■□□□ 1.45
VSX1-206ENST00000444511 MAFGO15525 162 aa24.09■■□□□ 1.45
VSX1-206ENST00000444511 ADAM17P78536 824 aa24.09■■□□□ 1.45
VSX1-206ENST00000444511 PPP1R18Q6NYC8 613 aa24.09■■□□□ 1.45
VSX1-206ENST00000444511 TGS1Q96RS0 853 aaKnown RBP24.09■■□□□ 1.45
VSX1-206ENST00000444511 MTUS1Q9ULD2 1270 aa24.09■■□□□ 1.45
VSX1-206ENST00000444511 DOCK5Q9H7D0 1870 aa24.09■■□□□ 1.45
VSX1-206ENST00000444511 KLF18A0A0U1RQI7 1052 aa24.08■■□□□ 1.45
VSX1-206ENST00000444511 GOLGA8AA7E2F4 631 aa24.08■■□□□ 1.45
VSX1-206ENST00000444511 GOLGA8BA8MQT2 603 aa24.08■■□□□ 1.45
VSX1-206ENST00000444511 HMGB1P09429 215 aaKnown RBP24.08■■□□□ 1.45
VSX1-206ENST00000444511 FGD1P98174 961 aa24.08■■□□□ 1.45
VSX1-206ENST00000444511 ADAMTS19Q8TE59 1207 aa24.08■■□□□ 1.45
VSX1-206ENST00000444511 GLG1Q92896 1179 aa24.08■■□□□ 1.45
VSX1-206ENST00000444511 RIC8AQ9NPQ8 531 aa24.08■■□□□ 1.45
VSX1-206ENST00000444511 ERAP1Q9NZ08 941 aa24.08■■□□□ 1.45
VSX1-206ENST00000444511 NAP1L2Q9ULW6 460 aaPredicted RBP24.08■■□□□ 1.45
VSX1-206ENST00000444511 INSL6Q9Y581 213 aa24.08■■□□□ 1.45
VSX1-206ENST00000444511 V9GY48 417 aaPredicted RBP24.08■■□□□ 1.45
VSX1-206ENST00000444511 GSTTP1A0A1W2PQM5 241 aa24.07■■□□□ 1.44
VSX1-206ENST00000444511 LINC01553A4QN01 128 aa24.07■■□□□ 1.44
VSX1-206ENST00000444511 hCG_1984214I3L0E3 225 aa24.07■■□□□ 1.44
VSX1-206ENST00000444511 TNFRSF10AO00220 468 aa24.07■■□□□ 1.44
VSX1-206ENST00000444511 MARK3P27448 753 aa24.07■■□□□ 1.44
VSX1-206ENST00000444511 ADCY7P51828 1080 aa24.07■■□□□ 1.44
VSX1-206ENST00000444511 FUT2Q10981 343 aa24.07■■□□□ 1.44
VSX1-206ENST00000444511 PPFIA1Q13136 1202 aa24.07■■□□□ 1.44
VSX1-206ENST00000444511 MKRN4PQ13434 485 aaPredicted RBP24.07■■□□□ 1.44
VSX1-206ENST00000444511 AAK1Q2M2I8 961 aa24.07■■□□□ 1.44
VSX1-206ENST00000444511 TYW1BQ6NUM6 668 aa24.07■■□□□ 1.44
VSX1-206ENST00000444511 TEX2Q8IWB9 1127 aa24.07■■□□□ 1.44
VSX1-206ENST00000444511 ZNF713Q8N859 430 aaPredicted RBP24.07■■□□□ 1.44
VSX1-206ENST00000444511 GDPD5Q8WTR4 605 aa24.07■■□□□ 1.44
VSX1-206ENST00000444511 SMARCAD1Q9H4L7 1026 aa24.07■■□□□ 1.44
VSX1-206ENST00000444511 LPXNO60711 386 aa24.06■■□□□ 1.44
VSX1-206ENST00000444511 FOSP01100 380 aaPredicted RBP24.06■■□□□ 1.44
VSX1-206ENST00000444511 ERVK-21P61565 698 aa24.06■■□□□ 1.44
VSX1-206ENST00000444511 TFF2Q03403 129 aa24.06■■□□□ 1.44
VSX1-206ENST00000444511 TAF2Q6P1X5 1199 aa24.06■■□□□ 1.44
VSX1-206ENST00000444511 MXRA8Q9BRK3 442 aa24.06■■□□□ 1.44
VSX1-206ENST00000444511 OSBPL7Q9BZF2 842 aa24.06■■□□□ 1.44
VSX1-206ENST00000444511 JPH1Q9HDC5 661 aaPredicted RBP24.06■■□□□ 1.44
VSX1-206ENST00000444511 KCNH7Q9NS40 1196 aa24.06■■□□□ 1.44
VSX1-206ENST00000444511 GRIK4Q16099 956 aa24.05■■□□□ 1.44
VSX1-206ENST00000444511 FAM26DQ5JW98 314 aa24.05■■□□□ 1.44
VSX1-206ENST00000444511 APBB2Q92870 758 aa24.05■■□□□ 1.44
VSX1-206ENST00000444511 PGBD1Q96JS3 809 aa24.05■■□□□ 1.44
VSX1-206ENST00000444511 UHRF1Q96T88 793 aaPredicted RBP24.05■■□□□ 1.44
VSX1-206ENST00000444511 BARHL2Q9NY43 387 aa24.05■■□□□ 1.44
VSX1-206ENST00000444511 TTC28Q96AY4 2481 aa24.05■■□□□ 1.44
VSX1-206ENST00000444511 SMCO2A6NFE2 343 aa24.04■■□□□ 1.44
VSX1-206ENST00000444511 STXBP3O00186 592 aa24.04■■□□□ 1.44
VSX1-206ENST00000444511 RCAN1P53805 252 aa24.04■■□□□ 1.44
VSX1-206ENST00000444511 HTRA4P83105 476 aaPredicted RBP24.04■■□□□ 1.44
VSX1-206ENST00000444511 RUFY4Q6ZNE9 571 aa24.04■■□□□ 1.44
VSX1-206ENST00000444511 RSPH3Q86UC2 560 aa24.04■■□□□ 1.44
VSX1-206ENST00000444511 SDF4Q9BRK5 362 aa24.04■■□□□ 1.44
VSX1-206ENST00000444511 ANO3Q9BYT9 981 aa24.04■■□□□ 1.44
VSX1-206ENST00000444511 IFIH1Q9BYX4 1025 aaKnown RBP24.04■■□□□ 1.44
VSX1-206ENST00000444511 GLT8D2Q9H1C3 349 aa24.04■■□□□ 1.44
VSX1-206ENST00000444511 SUGCTQ9HAC7 445 aa24.04■■□□□ 1.44
VSX1-206ENST00000444511 LMCD1Q9NZU5 365 aa24.04■■□□□ 1.44
VSX1-206ENST00000444511 SLC9A2Q9UBY0 812 aa24.04■■□□□ 1.44
VSX1-206ENST00000444511 TUBE1Q9UJT0 475 aa24.04■■□□□ 1.44
VSX1-206ENST00000444511 COG5Q9UP83 839 aa24.04■■□□□ 1.44
VSX1-206ENST00000444511 PRRC2BQ5JSZ5 2229 aaKnown RBP24.03■■□□□ 1.44
VSX1-206ENST00000444511 CDC27P30260 824 aa24.03■■□□□ 1.44
VSX1-206ENST00000444511 RPAINQ86UA6 219 aa24.03■■□□□ 1.44
VSX1-206ENST00000444511 CYP2W1Q8TAV3 490 aa24.03■■□□□ 1.44
VSX1-206ENST00000444511 YME1L1Q96TA2 773 aa24.03■■□□□ 1.44
VSX1-206ENST00000444511 AZI2Q9H6S1 392 aa24.03■■□□□ 1.44
VSX1-206ENST00000444511 FAM217BQ9NTX9 383 aaPredicted RBP24.03■■□□□ 1.44
VSX1-206ENST00000444511 CCDC196A0A1B0GTZ2 297 aa24.02■■□□□ 1.44
VSX1-206ENST00000444511 UPP2O95045 317 aa24.02■■□□□ 1.44
VSX1-206ENST00000444511 CHRNA1P02708 482 aa24.02■■□□□ 1.44
VSX1-206ENST00000444511 CPA1P15085 419 aa24.02■■□□□ 1.44
VSX1-206ENST00000444511 METAP2P50579 478 aaKnown RBP eCLIP24.02■■□□□ 1.44
VSX1-206ENST00000444511 IGBP1P78318 339 aa24.02■■□□□ 1.44
VSX1-206ENST00000444511 AP3B2Q13367 1082 aa24.02■■□□□ 1.44
VSX1-206ENST00000444511 CEP55Q53EZ4 464 aa24.02■■□□□ 1.44
VSX1-206ENST00000444511 TOP1MTQ969P6 601 aa24.02■■□□□ 1.44
VSX1-206ENST00000444511 TMEM260Q9NX78 707 aa24.02■■□□□ 1.44
VSX1-206ENST00000444511 NFASCO94856 1347 aa24.02■■□□□ 1.44
VSX1-206ENST00000444511 TRANK1O15050 2925 aa24.02■■□□□ 1.44
VSX1-206ENST00000444511 COL4A4P53420 1690 aaPredicted RBP24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms