RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 ZNF28P17035 718 aa7.49□□□□□ -1.21
HMGB3P5-201ENST00000428894 IL13P35225 146 aa7.49□□□□□ -1.21
HMGB3P5-201ENST00000428894 MLLT6P55198 1093 aaPredicted RBP7.49□□□□□ -1.21
HMGB3P5-201ENST00000428894 FAM124AQ86V42 546 aa7.49□□□□□ -1.21
HMGB3P5-201ENST00000428894 L2HGDHQ9H9P8 463 aa7.49□□□□□ -1.21
HMGB3P5-201ENST00000428894 HSPBP1Q9NZL4 362 aa7.49□□□□□ -1.21
HMGB3P5-201ENST00000428894 DSEQ9UL01 958 aa7.49□□□□□ -1.21
HMGB3P5-201ENST00000428894 AQRO60306 1485 aaKnown RBP eCLIP7.49□□□□□ -1.21
HMGB3P5-201ENST00000428894 CYP7B1O75881 506 aa7.48□□□□□ -1.21
HMGB3P5-201ENST00000428894 CYP1A1P04798 512 aaPredicted RBP7.48□□□□□ -1.21
HMGB3P5-201ENST00000428894 FAM153BP0C7A2 387 aa7.48□□□□□ -1.21
HMGB3P5-201ENST00000428894 RBL2Q08999 1139 aa7.48□□□□□ -1.21
HMGB3P5-201ENST00000428894 PAN2Q504Q3 1202 aaKnown RBP7.48□□□□□ -1.21
HMGB3P5-201ENST00000428894 HABP4Q5JVS0 413 aaKnown RBP7.48□□□□□ -1.21
HMGB3P5-201ENST00000428894 PROSER1Q86XN7 944 aa7.48□□□□□ -1.21
HMGB3P5-201ENST00000428894 ARMC5Q96C12 935 aa7.48□□□□□ -1.21
HMGB3P5-201ENST00000428894 LCORQ96JN0 433 aaPredicted RBP7.48□□□□□ -1.21
HMGB3P5-201ENST00000428894 WRNIP1Q96S55 665 aa7.48□□□□□ -1.21
HMGB3P5-201ENST00000428894 KDM2BQ8NHM5 1336 aa7.48□□□□□ -1.21
HMGB3P5-201ENST00000428894 AQP7O14520 342 aa7.47□□□□□ -1.21
HMGB3P5-201ENST00000428894 SUMO1P63165 101 aaKnown RBP7.47□□□□□ -1.21
HMGB3P5-201ENST00000428894 SERINC3Q13530 473 aa7.47□□□□□ -1.21
HMGB3P5-201ENST00000428894 VASNQ6EMK4 673 aa7.47□□□□□ -1.21
HMGB3P5-201ENST00000428894 BORAQ6PGQ7 559 aa7.47□□□□□ -1.21
HMGB3P5-201ENST00000428894 MAMDC2Q7Z304 686 aaPredicted RBP7.47□□□□□ -1.21
HMGB3P5-201ENST00000428894 MTDHQ86UE4 582 aaKnown RBP7.47□□□□□ -1.21
HMGB3P5-201ENST00000428894 LGI4Q8N135 537 aa7.47□□□□□ -1.21
HMGB3P5-201ENST00000428894 PTPRN2Q92932 1015 aa7.47□□□□□ -1.21
HMGB3P5-201ENST00000428894 TELO2Q9Y4R8 837 aa7.47□□□□□ -1.21
HMGB3P5-201ENST00000428894 DNMBPQ6XZF7 1577 aa7.46□□□□□ -1.21
HMGB3P5-201ENST00000428894 C9orf118A6NHY6 69 aa7.46□□□□□ -1.22
HMGB3P5-201ENST00000428894 K7ESM1 405 aa7.46□□□□□ -1.22
HMGB3P5-201ENST00000428894 FAHP16930 419 aa7.46□□□□□ -1.22
HMGB3P5-201ENST00000428894 PAK1Q13153 545 aa7.46□□□□□ -1.22
HMGB3P5-201ENST00000428894 PHF19Q5T6S3 580 aa7.46□□□□□ -1.22
HMGB3P5-201ENST00000428894 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.46□□□□□ -1.22
HMGB3P5-201ENST00000428894 ZCCHC14Q8WYQ9 949 aaKnown RBP7.46□□□□□ -1.22
HMGB3P5-201ENST00000428894 EXOC2Q96KP1 924 aa7.46□□□□□ -1.22
HMGB3P5-201ENST00000428894 YTHDC1Q96MU7 727 aaKnown RBP7.46□□□□□ -1.22
HMGB3P5-201ENST00000428894 DHRS4Q9BTZ2 278 aa7.46□□□□□ -1.22
HMGB3P5-201ENST00000428894 TMEM168Q9H0V1 697 aa7.46□□□□□ -1.22
HMGB3P5-201ENST00000428894 INVSQ9Y283 1065 aa7.46□□□□□ -1.22
HMGB3P5-201ENST00000428894 FAM221BA6H8Z2 402 aa7.45□□□□□ -1.22
HMGB3P5-201ENST00000428894 C6orf222P0C671 652 aaPredicted RBP7.45□□□□□ -1.22
HMGB3P5-201ENST00000428894 RASA3Q14644 834 aa7.45□□□□□ -1.22
HMGB3P5-201ENST00000428894 TRMT10BQ6PF06 316 aaKnown RBP7.45□□□□□ -1.22
HMGB3P5-201ENST00000428894 KCTD1Q719H9 257 aa7.45□□□□□ -1.22
HMGB3P5-201ENST00000428894 DEPDC7Q96QD5 511 aa7.45□□□□□ -1.22
HMGB3P5-201ENST00000428894 KRTAP9-3Q9BYQ3 159 aa7.45□□□□□ -1.22
HMGB3P5-201ENST00000428894 PDGFDQ9GZP0 370 aaPredicted RBP7.45□□□□□ -1.22
HMGB3P5-201ENST00000428894 DLL4Q9NR61 685 aa7.45□□□□□ -1.22
HMGB3P5-201ENST00000428894 PCDHA8Q9Y5H6 950 aa7.45□□□□□ -1.22
HMGB3P5-201ENST00000428894 TARBP1Q13395 1621 aaKnown RBP7.45□□□□□ -1.22
HMGB3P5-201ENST00000428894 PLATP00750 562 aa7.44□□□□□ -1.22
HMGB3P5-201ENST00000428894 ITGB3P05106 788 aa7.44□□□□□ -1.22
HMGB3P5-201ENST00000428894 CKMP06732 381 aa7.44□□□□□ -1.22
HMGB3P5-201ENST00000428894 EPHA5P54756 1037 aa7.44□□□□□ -1.22
HMGB3P5-201ENST00000428894 GUCY1A3Q02108 690 aa7.44□□□□□ -1.22
HMGB3P5-201ENST00000428894 EFEMP1Q12805 493 aa7.44□□□□□ -1.22
HMGB3P5-201ENST00000428894 SPATS1Q496A3 300 aa7.44□□□□□ -1.22
HMGB3P5-201ENST00000428894 LRP10Q7Z4F1 713 aa7.44□□□□□ -1.22
HMGB3P5-201ENST00000428894 DTX3Q8N9I9 347 aa7.44□□□□□ -1.22
HMGB3P5-201ENST00000428894 SH3RF2Q8TEC5 729 aa7.44□□□□□ -1.22
HMGB3P5-201ENST00000428894 CD244Q9BZW8 370 aa7.44□□□□□ -1.22
HMGB3P5-201ENST00000428894 SNTG2Q9NY99 539 aa7.44□□□□□ -1.22
HMGB3P5-201ENST00000428894 FTSJ1Q9UET6 329 aa7.44□□□□□ -1.22
HMGB3P5-201ENST00000428894 CNOT11Q9UKZ1 510 aaKnown RBP7.44□□□□□ -1.22
HMGB3P5-201ENST00000428894 SYNJ1O43426 1573 aa7.44□□□□□ -1.22
HMGB3P5-201ENST00000428894 TCRBV5S4A2TA0A5A2 114 aa7.43□□□□□ -1.22
HMGB3P5-201ENST00000428894 ENO2P09104 434 aaPredicted RBP7.43□□□□□ -1.22
HMGB3P5-201ENST00000428894 GABREP78334 506 aa7.43□□□□□ -1.22
HMGB3P5-201ENST00000428894 LONRF2Q1L5Z9 754 aa7.43□□□□□ -1.22
HMGB3P5-201ENST00000428894 SKIDA1Q1XH10 827 aa7.43□□□□□ -1.22
HMGB3P5-201ENST00000428894 TBC1D10BQ4KMP7 808 aaPredicted RBP7.43□□□□□ -1.22
HMGB3P5-201ENST00000428894 LCE5AQ5TCM9 118 aa7.43□□□□□ -1.22
HMGB3P5-201ENST00000428894 PCDH19Q8TAB3 1148 aa7.43□□□□□ -1.22
HMGB3P5-201ENST00000428894 FBXW5Q969U6 566 aa7.43□□□□□ -1.22
HMGB3P5-201ENST00000428894 SRPK1Q96SB4 655 aaKnown RBP7.43□□□□□ -1.22
HMGB3P5-201ENST00000428894 RBM15Q96T37 977 aaKnown RBP eCLIP7.43□□□□□ -1.22
HMGB3P5-201ENST00000428894 CATSPERZQ9NTU4 200 aa7.43□□□□□ -1.22
HMGB3P5-201ENST00000428894 MRPS23Q9Y3D9 190 aaKnown RBP7.43□□□□□ -1.22
HMGB3P5-201ENST00000428894 PCDHA9Q9Y5H5 950 aa7.43□□□□□ -1.22
HMGB3P5-201ENST00000428894 ZNF536O15090 1300 aa7.43□□□□□ -1.22
HMGB3P5-201ENST00000428894 CCDC88BA6NC98 1476 aa7.43□□□□□ -1.22
HMGB3P5-201ENST00000428894 ACOT7O00154 380 aa7.42□□□□□ -1.22
HMGB3P5-201ENST00000428894 ADRB1P08588 477 aa7.42□□□□□ -1.22
HMGB3P5-201ENST00000428894 SRGAP2CP0DJJ0 459 aa7.42□□□□□ -1.22
HMGB3P5-201ENST00000428894 NAT1P18440 290 aa7.42□□□□□ -1.22
HMGB3P5-201ENST00000428894 GLRBP48167 497 aa7.42□□□□□ -1.22
HMGB3P5-201ENST00000428894 NFKB2Q00653 900 aa7.42□□□□□ -1.22
HMGB3P5-201ENST00000428894 PFKPQ01813 784 aa7.42□□□□□ -1.22
HMGB3P5-201ENST00000428894 CD276Q5ZPR3 534 aa7.42□□□□□ -1.22
HMGB3P5-201ENST00000428894 ARHGAP36Q6ZRI8 547 aa7.42□□□□□ -1.22
HMGB3P5-201ENST00000428894 PMFBP1Q8TBY8 1022 aa7.42□□□□□ -1.22
HMGB3P5-201ENST00000428894 MBD6Q96DN6 1003 aa7.42□□□□□ -1.22
HMGB3P5-201ENST00000428894 DNAJC7Q99615 494 aa7.42□□□□□ -1.22
HMGB3P5-201ENST00000428894 SOGA1O94964 1423 aa7.42□□□□□ -1.22
HMGB3P5-201ENST00000428894 CLASP1Q7Z460 1538 aa7.42□□□□□ -1.22
HMGB3P5-201ENST00000428894 WDR97A6NE52 1622 aa7.41□□□□□ -1.22
HMGB3P5-201ENST00000428894 WNT9AO14904 365 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms