RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 MAFKO60675 156 aa7.23□□□□□ -1.25
LINC00458-202ENST00000427299 KLHL18O94889 574 aa7.23□□□□□ -1.25
LINC00458-202ENST00000427299 DTX3Q8N9I9 347 aa7.23□□□□□ -1.25
LINC00458-202ENST00000427299 MICAL1Q8TDZ2 1067 aa7.23□□□□□ -1.25
LINC00458-202ENST00000427299 MRIQ9BWK5 157 aa7.23□□□□□ -1.25
LINC00458-202ENST00000427299 TCAF1Q9Y4C2 921 aa7.23□□□□□ -1.25
LINC00458-202ENST00000427299 ATAD2BQ9ULI0 1458 aa7.23□□□□□ -1.25
LINC00458-202ENST00000427299 VPS8Q8N3P4 1428 aa7.22□□□□□ -1.25
LINC00458-202ENST00000427299 AMHP03971 560 aa7.22□□□□□ -1.25
LINC00458-202ENST00000427299 GRIA2P42262 883 aa7.22□□□□□ -1.25
LINC00458-202ENST00000427299 PIP4K2CQ8TBX8 421 aa7.22□□□□□ -1.25
LINC00458-202ENST00000427299 Q8TCH9 128 aa7.22□□□□□ -1.25
LINC00458-202ENST00000427299 SLC6A20Q9NP91 592 aa7.22□□□□□ -1.25
LINC00458-202ENST00000427299 DLL4Q9NR61 685 aa7.22□□□□□ -1.25
LINC00458-202ENST00000427299 ZDHHC9Q9Y397 364 aa7.22□□□□□ -1.25
LINC00458-202ENST00000427299 TESMINQ9Y4I5 508 aa7.22□□□□□ -1.25
LINC00458-202ENST00000427299 SOGA1O94964 1423 aa7.21□□□□□ -1.25
LINC00458-202ENST00000427299 OVOL3O00110 214 aa7.21□□□□□ -1.26
LINC00458-202ENST00000427299 KRIT1O00522 736 aa7.21□□□□□ -1.26
LINC00458-202ENST00000427299 MUSKO15146 869 aa7.21□□□□□ -1.26
LINC00458-202ENST00000427299 ZNF623O75123 536 aa7.21□□□□□ -1.26
LINC00458-202ENST00000427299 DDAH1O94760 285 aa7.21□□□□□ -1.26
LINC00458-202ENST00000427299 CNOT4O95628 575 aaKnown RBP7.21□□□□□ -1.26
LINC00458-202ENST00000427299 MAP4K2Q12851 820 aa7.21□□□□□ -1.26
LINC00458-202ENST00000427299 SPDYAQ5MJ70 313 aa7.21□□□□□ -1.26
LINC00458-202ENST00000427299 TRIM48Q8IWZ4 208 aa7.21□□□□□ -1.26
LINC00458-202ENST00000427299 GMLQ99445 158 aa7.21□□□□□ -1.26
LINC00458-202ENST00000427299 SEMA4AQ9H3S1 761 aa7.21□□□□□ -1.26
LINC00458-202ENST00000427299 PRKAG3Q9UGI9 489 aa7.21□□□□□ -1.26
LINC00458-202ENST00000427299 KNG1P01042 644 aa7.2□□□□□ -1.26
LINC00458-202ENST00000427299 CHGBP05060 677 aa7.2□□□□□ -1.26
LINC00458-202ENST00000427299 PHF19Q5T6S3 580 aa7.2□□□□□ -1.26
LINC00458-202ENST00000427299 VASNQ6EMK4 673 aa7.2□□□□□ -1.26
LINC00458-202ENST00000427299 Q6ZUG5 572 aa7.2□□□□□ -1.26
LINC00458-202ENST00000427299 USP51Q70EK9 711 aa7.2□□□□□ -1.26
LINC00458-202ENST00000427299 CLEC4DQ8WXI8 215 aa7.2□□□□□ -1.26
LINC00458-202ENST00000427299 JAM3Q9BX67 310 aa7.2□□□□□ -1.26
LINC00458-202ENST00000427299 PCED1AQ9H1Q7 454 aa7.2□□□□□ -1.26
LINC00458-202ENST00000427299 GPR27Q9NS67 375 aa7.2□□□□□ -1.26
LINC00458-202ENST00000427299 SLC27A2O14975 620 aa7.19□□□□□ -1.26
LINC00458-202ENST00000427299 MSCO60682 206 aa7.19□□□□□ -1.26
LINC00458-202ENST00000427299 PPP2R2AP63151 447 aa7.19□□□□□ -1.26
LINC00458-202ENST00000427299 SMAD2Q15796 467 aaKnown RBP7.19□□□□□ -1.26
LINC00458-202ENST00000427299 FXNQ16595 210 aa7.19□□□□□ -1.26
LINC00458-202ENST00000427299 SLC10A6Q3KNW5 377 aa7.19□□□□□ -1.26
LINC00458-202ENST00000427299 RALYLQ86SE5 291 aaKnown RBP7.19□□□□□ -1.26
LINC00458-202ENST00000427299 PDGFDQ9GZP0 370 aaPredicted RBP7.19□□□□□ -1.26
LINC00458-202ENST00000427299 EPN3Q9H201 632 aa7.19□□□□□ -1.26
LINC00458-202ENST00000427299 SEC61A2Q9H9S3 476 aa7.19□□□□□ -1.26
LINC00458-202ENST00000427299 PPARGC1AQ9UBK2 798 aaKnown RBP7.19□□□□□ -1.26
LINC00458-202ENST00000427299 SLC4A7Q9Y6M7 1214 aa7.19□□□□□ -1.26
LINC00458-202ENST00000427299 CLIP1P30622 1438 aa7.18□□□□□ -1.26
LINC00458-202ENST00000427299 SSBP05455 408 aaKnown RBP eCLIP7.18□□□□□ -1.26
LINC00458-202ENST00000427299 GRIN1Q05586 938 aa7.18□□□□□ -1.26
LINC00458-202ENST00000427299 EEPD1Q7L9B9 569 aa7.18□□□□□ -1.26
LINC00458-202ENST00000427299 KCTD13Q8WZ19 329 aa7.18□□□□□ -1.26
LINC00458-202ENST00000427299 AJUBAQ96IF1 538 aa7.18□□□□□ -1.26
LINC00458-202ENST00000427299 MENTQ9BUN1 341 aa7.18□□□□□ -1.26
LINC00458-202ENST00000427299 CAPN10Q9HC96 672 aa7.18□□□□□ -1.26
LINC00458-202ENST00000427299 CKMP06732 381 aa7.17□□□□□ -1.26
LINC00458-202ENST00000427299 CENPBP07199 599 aaPredicted RBP7.17□□□□□ -1.26
LINC00458-202ENST00000427299 CSF2RBP32927 897 aa7.17□□□□□ -1.26
LINC00458-202ENST00000427299 ETFBP38117 255 aa7.17□□□□□ -1.26
LINC00458-202ENST00000427299 KRTAP1-1Q07627 177 aa7.17□□□□□ -1.26
LINC00458-202ENST00000427299 OTOP3Q7RTS5 596 aa7.17□□□□□ -1.26
LINC00458-202ENST00000427299 SREK1Q8WXA9 508 aaKnown RBP7.17□□□□□ -1.26
LINC00458-202ENST00000427299 IER2Q9BTL4 223 aa7.17□□□□□ -1.26
LINC00458-202ENST00000427299 SLITRK6Q9H5Y7 841 aa7.17□□□□□ -1.26
LINC00458-202ENST00000427299 ZFP69BQ9UJL9 534 aa7.17□□□□□ -1.26
LINC00458-202ENST00000427299 A0A1W2PQU0 124 aa7.16□□□□□ -1.26
LINC00458-202ENST00000427299 FOXS1O43638 330 aa7.16□□□□□ -1.26
LINC00458-202ENST00000427299 DLX3O60479 287 aa7.16□□□□□ -1.26
LINC00458-202ENST00000427299 GJB6O95452 261 aa7.16□□□□□ -1.26
LINC00458-202ENST00000427299 FAHP16930 419 aa7.16□□□□□ -1.26
LINC00458-202ENST00000427299 KLF10Q13118 480 aa7.16□□□□□ -1.26
LINC00458-202ENST00000427299 TUSC3Q13454 348 aa7.16□□□□□ -1.26
LINC00458-202ENST00000427299 SKIDA1Q1XH10 827 aa7.16□□□□□ -1.26
LINC00458-202ENST00000427299 TCTN3Q6NUS6 607 aa7.16□□□□□ -1.26
LINC00458-202ENST00000427299 RSPO2Q6UXX9 243 aaPredicted RBP7.16□□□□□ -1.26
LINC00458-202ENST00000427299 RBM12BQ8IXT5 1001 aaKnown RBP7.16□□□□□ -1.26
LINC00458-202ENST00000427299 UHMK1Q8TAS1 419 aaKnown RBP7.16□□□□□ -1.26
LINC00458-202ENST00000427299 GNRHR2Q96P88 292 aa7.16□□□□□ -1.26
LINC00458-202ENST00000427299 PHF20Q9BVI0 1012 aa7.16□□□□□ -1.26
LINC00458-202ENST00000427299 KATNBL1Q9H079 304 aa7.16□□□□□ -1.26
LINC00458-202ENST00000427299 KCND1Q9NSA2 647 aa7.16□□□□□ -1.26
LINC00458-202ENST00000427299 AGRPO00253 132 aa7.15□□□□□ -1.26
LINC00458-202ENST00000427299 PAN2Q504Q3 1202 aaKnown RBP7.15□□□□□ -1.26
LINC00458-202ENST00000427299 HABP4Q5JVS0 413 aaKnown RBP7.15□□□□□ -1.26
LINC00458-202ENST00000427299 TELO2Q9Y4R8 837 aa7.15□□□□□ -1.26
LINC00458-202ENST00000427299 HS3ST3A1Q9Y663 406 aa7.15□□□□□ -1.26
LINC00458-202ENST00000427299 FBXO21O94952 628 aa7.14□□□□□ -1.27
LINC00458-202ENST00000427299 LTFP02788 710 aa7.14□□□□□ -1.27
LINC00458-202ENST00000427299 GRK2P25098 689 aa7.14□□□□□ -1.27
LINC00458-202ENST00000427299 GRK3P35626 688 aa7.14□□□□□ -1.27
LINC00458-202ENST00000427299 CD276Q5ZPR3 534 aa7.14□□□□□ -1.27
LINC00458-202ENST00000427299 USP53Q70EK8 1073 aa7.14□□□□□ -1.27
LINC00458-202ENST00000427299 GPR155Q7Z3F1 870 aa7.14□□□□□ -1.27
LINC00458-202ENST00000427299 REXO1L1PQ8IX06 675 aa7.14□□□□□ -1.27
LINC00458-202ENST00000427299 RUSC2Q8N2Y8 1516 aa7.14□□□□□ -1.27
LINC00458-202ENST00000427299 STPG3Q8N7X2 389 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms