RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 CNKSR3Q6P9H4 555 aa14.63□□□□□ -0.07
SGCE-203ENST00000425444 RNF135Q8IUD6 432 aa14.63□□□□□ -0.07
SGCE-203ENST00000425444 CCDC155Q8N6L0 562 aa14.63□□□□□ -0.07
SGCE-203ENST00000425444 IL31RAQ8NI17 732 aa14.63□□□□□ -0.07
SGCE-203ENST00000425444 SMARCC2Q8TAQ2 1214 aa14.63□□□□□ -0.07
SGCE-203ENST00000425444 AFG1LQ8WV93 481 aa14.63□□□□□ -0.07
SGCE-203ENST00000425444 EDAQ92838 391 aa14.63□□□□□ -0.07
SGCE-203ENST00000425444 JAKMIP1Q96N16 626 aaKnown RBP14.63□□□□□ -0.07
SGCE-203ENST00000425444 POP1Q99575 1024 aaKnown RBP14.63□□□□□ -0.07
SGCE-203ENST00000425444 RBM28Q9NW13 759 aaKnown RBP14.63□□□□□ -0.07
SGCE-203ENST00000425444 PPP4R2Q9NY27 417 aa14.63□□□□□ -0.07
SGCE-203ENST00000425444 CLDND1Q9NY35 253 aa14.63□□□□□ -0.07
SGCE-203ENST00000425444 NCOR2Q9Y618 2525 aa14.62□□□□□ -0.07
SGCE-203ENST00000425444 hCG_1642624A0A1W2PR95 340 aa14.62□□□□□ -0.07
SGCE-203ENST00000425444 TMEM221A6NGB7 291 aa14.62□□□□□ -0.07
SGCE-203ENST00000425444 GOLGA8AA7E2F4 631 aa14.62□□□□□ -0.07
SGCE-203ENST00000425444 GOLGA8BA8MQT2 603 aa14.62□□□□□ -0.07
SGCE-203ENST00000425444 M0R296 226 aa14.62□□□□□ -0.07
SGCE-203ENST00000425444 MMP3P08254 477 aa14.62□□□□□ -0.07
SGCE-203ENST00000425444 HSPA4P34932 840 aa14.62□□□□□ -0.07
SGCE-203ENST00000425444 GPNMBQ14956 572 aa14.62□□□□□ -0.07
SGCE-203ENST00000425444 TCEAL5Q5H9L2 206 aa14.62□□□□□ -0.07
SGCE-203ENST00000425444 HEATR3Q7Z4Q2 680 aa14.62□□□□□ -0.07
SGCE-203ENST00000425444 BMP8AQ7Z5Y6 402 aa14.62□□□□□ -0.07
SGCE-203ENST00000425444 CAGE1Q8TC20 777 aa14.62□□□□□ -0.07
SGCE-203ENST00000425444 AFAP1L1Q8TED9 768 aa14.62□□□□□ -0.07
SGCE-203ENST00000425444 DDX41Q9UJV9 622 aaKnown RBP14.62□□□□□ -0.07
SGCE-203ENST00000425444 DMXL1Q9Y485 3027 aa14.61□□□□□ -0.07
SGCE-203ENST00000425444 ABHD14A-ACY1A0A1B0GW23 586 aa14.61□□□□□ -0.07
SGCE-203ENST00000425444 SORBS3O60504 671 aa14.61□□□□□ -0.07
SGCE-203ENST00000425444 CPA1P15085 419 aa14.61□□□□□ -0.07
SGCE-203ENST00000425444 SELPP16109 830 aa14.61□□□□□ -0.07
SGCE-203ENST00000425444 CASTP20810 708 aaKnown RBP14.61□□□□□ -0.07
SGCE-203ENST00000425444 EXOSC10Q01780 885 aaKnown RBP14.61□□□□□ -0.07
SGCE-203ENST00000425444 PTPN11Q06124 597 aaPredicted RBP14.61□□□□□ -0.07
SGCE-203ENST00000425444 ARHGAP1Q07960 439 aa14.61□□□□□ -0.07
SGCE-203ENST00000425444 CLUL1Q15846 466 aa14.61□□□□□ -0.07
SGCE-203ENST00000425444 PTGISQ16647 500 aa14.61□□□□□ -0.07
SGCE-203ENST00000425444 GNPTABQ3T906 1256 aa14.61□□□□□ -0.07
SGCE-203ENST00000425444 KCNV1Q6PIU1 500 aa14.61□□□□□ -0.07
SGCE-203ENST00000425444 BLOC1S2Q6QNY1 142 aa14.61□□□□□ -0.07
SGCE-203ENST00000425444 TRIM67Q6ZTA4 783 aa14.61□□□□□ -0.07
SGCE-203ENST00000425444 VSIG10LQ86VR7 867 aa14.61□□□□□ -0.07
SGCE-203ENST00000425444 DHX37Q8IY37 1157 aaKnown RBP14.61□□□□□ -0.07
SGCE-203ENST00000425444 ATOH1Q92858 354 aaPredicted RBP14.61□□□□□ -0.07
SGCE-203ENST00000425444 ZFP91Q96JP5 570 aaPredicted RBP14.61□□□□□ -0.07
SGCE-203ENST00000425444 BRPF3Q9ULD4 1205 aa14.61□□□□□ -0.07
SGCE-203ENST00000425444 INSL6Q9Y581 213 aa14.61□□□□□ -0.07
SGCE-203ENST00000425444 SNX14Q9Y5W7 946 aa14.61□□□□□ -0.07
SGCE-203ENST00000425444 CNTNAP5Q8WYK1 1306 aa14.61□□□□□ -0.07
SGCE-203ENST00000425444 EP300Q09472 2414 aaPredicted RBP14.61□□□□□ -0.07
SGCE-203ENST00000425444 EFCAB14O75071 495 aa14.6□□□□□ -0.07
SGCE-203ENST00000425444 LAMC2Q13753 1193 aa14.6□□□□□ -0.07
SGCE-203ENST00000425444 IKBKEQ14164 716 aa14.6□□□□□ -0.07
SGCE-203ENST00000425444 SMAD2Q15796 467 aaKnown RBP14.6□□□□□ -0.07
SGCE-203ENST00000425444 DGKDQ16760 1214 aa14.6□□□□□ -0.07
SGCE-203ENST00000425444 TCTN1Q2MV58 587 aa14.6□□□□□ -0.07
SGCE-203ENST00000425444 EPC2Q52LR7 807 aa14.6□□□□□ -0.07
SGCE-203ENST00000425444 ERICH6BQ5W0A0 696 aa14.6□□□□□ -0.07
SGCE-203ENST00000425444 USP17L6PQ6QN14 398 aa14.6□□□□□ -0.07
SGCE-203ENST00000425444 LRRC8DQ7L1W4 858 aa14.6□□□□□ -0.07
SGCE-203ENST00000425444 GPKOWQ92917 476 aaPredicted RBP eCLIP14.6□□□□□ -0.07
SGCE-203ENST00000425444 NSUN3Q9H649 340 aaKnown RBP14.6□□□□□ -0.07
SGCE-203ENST00000425444 PSTPIP2Q9H939 334 aa14.6□□□□□ -0.07
SGCE-203ENST00000425444 KIAA1217Q5T5P2 1943 aa14.6□□□□□ -0.07
SGCE-203ENST00000425444 FRMPD4Q14CM0 1322 aa14.6□□□□□ -0.07
SGCE-203ENST00000425444 DNAH14Q0VDD8 3507 aa14.59□□□□□ -0.07
SGCE-203ENST00000425444 NBNO60934 754 aa14.59□□□□□ -0.07
SGCE-203ENST00000425444 RGS20O76081 388 aa14.59□□□□□ -0.07
SGCE-203ENST00000425444 GGPS1O95749 300 aa14.59□□□□□ -0.07
SGCE-203ENST00000425444 CXCL10P02778 98 aa14.59□□□□□ -0.07
SGCE-203ENST00000425444 UBA1P22314 1058 aaKnown RBP14.59□□□□□ -0.07
SGCE-203ENST00000425444 PSMA5P28066 241 aa14.59□□□□□ -0.07
SGCE-203ENST00000425444 METAP2P50579 478 aaKnown RBP eCLIP14.59□□□□□ -0.07
SGCE-203ENST00000425444 GPM6BQ13491 265 aa14.59□□□□□ -0.07
SGCE-203ENST00000425444 COL19A1Q14993 1142 aa14.59□□□□□ -0.07
SGCE-203ENST00000425444 Q6ZUG5 572 aa14.59□□□□□ -0.07
SGCE-203ENST00000425444 RPAINQ86UA6 219 aa14.59□□□□□ -0.07
SGCE-203ENST00000425444 PPTC7Q8NI37 304 aa14.59□□□□□ -0.07
SGCE-203ENST00000425444 KCNB2Q92953 911 aa14.59□□□□□ -0.07
SGCE-203ENST00000425444 BRF1Q92994 677 aa14.59□□□□□ -0.07
SGCE-203ENST00000425444 EMID1Q96A84 441 aaPredicted RBP14.59□□□□□ -0.07
SGCE-203ENST00000425444 FRYLO94915 3013 aa14.58□□□□□ -0.07
SGCE-203ENST00000425444 SPDYE3A6NKU9 549 aa14.58□□□□□ -0.08
SGCE-203ENST00000425444 PIK3CDO00329 1044 aa14.58□□□□□ -0.08
SGCE-203ENST00000425444 MEIS2O14770 477 aa14.58□□□□□ -0.08
SGCE-203ENST00000425444 STAM2O75886 525 aa14.58□□□□□ -0.08
SGCE-203ENST00000425444 PARNO95453 639 aaKnown RBP14.58□□□□□ -0.08
SGCE-203ENST00000425444 ZNF286BP0CG31 522 aa14.58□□□□□ -0.08
SGCE-203ENST00000425444 TGFB3P10600 412 aa14.58□□□□□ -0.08
SGCE-203ENST00000425444 RPS6KB1P23443 525 aa14.58□□□□□ -0.08
SGCE-203ENST00000425444 LTBRP36941 435 aa14.58□□□□□ -0.08
SGCE-203ENST00000425444 RCAN1P53805 252 aa14.58□□□□□ -0.08
SGCE-203ENST00000425444 NAPAP54920 295 aa14.58□□□□□ -0.08
SGCE-203ENST00000425444 APOBRQ0VD83 1088 aa14.58□□□□□ -0.08
SGCE-203ENST00000425444 UBE2SQ16763 222 aa14.58□□□□□ -0.08
SGCE-203ENST00000425444 ERMP1Q7Z2K6 904 aa14.58□□□□□ -0.08
SGCE-203ENST00000425444 FBXL6Q8N531 539 aa14.58□□□□□ -0.08
SGCE-203ENST00000425444 SPATA33Q96N06 139 aa14.58□□□□□ -0.08
SGCE-203ENST00000425444 KATNAL1Q9BW62 490 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms