RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 SKAP1Q86WV1 359 aa20.36■□□□□ 0.85
GPC1-203ENST00000425056 CCDC82Q8N4S0 544 aa20.36■□□□□ 0.85
GPC1-203ENST00000425056 IL27Q8NEV9 243 aa20.36■□□□□ 0.85
GPC1-203ENST00000425056 UBIAD1Q9Y5Z9 338 aa20.36■□□□□ 0.85
GPC1-203ENST00000425056 NRCAMQ92823 1304 aa20.35■□□□□ 0.85
GPC1-203ENST00000425056 SPDYE3A6NKU9 549 aa20.35■□□□□ 0.85
GPC1-203ENST00000425056 ATP9AO75110 1047 aa20.35■□□□□ 0.85
GPC1-203ENST00000425056 AMHP03971 560 aa20.35■□□□□ 0.85
GPC1-203ENST00000425056 ERVK-21P61565 698 aa20.35■□□□□ 0.85
GPC1-203ENST00000425056 TFF2Q03403 129 aa20.35■□□□□ 0.85
GPC1-203ENST00000425056 MTMR1Q13613 665 aa20.35■□□□□ 0.85
GPC1-203ENST00000425056 AAK1Q2M2I8 961 aa20.35■□□□□ 0.85
GPC1-203ENST00000425056 SYNE3Q6ZMZ3 975 aa20.35■□□□□ 0.85
GPC1-203ENST00000425056 GDPD5Q8WTR4 605 aa20.35■□□□□ 0.85
GPC1-203ENST00000425056 NEK1Q96PY6 1258 aa20.35■□□□□ 0.85
GPC1-203ENST00000425056 TGS1Q96RS0 853 aaKnown RBP20.35■□□□□ 0.85
GPC1-203ENST00000425056 RBM28Q9NW13 759 aaKnown RBP20.35■□□□□ 0.85
GPC1-203ENST00000425056 LMCD1Q9NZU5 365 aa20.35■□□□□ 0.85
GPC1-203ENST00000425056 TCF20Q9UGU0 1960 aaKnown RBP20.34■□□□□ 0.85
GPC1-203ENST00000425056 HTRA4P83105 476 aaPredicted RBP20.34■□□□□ 0.85
GPC1-203ENST00000425056 ARHGAP4P98171 946 aa20.34■□□□□ 0.85
GPC1-203ENST00000425056 EXOSC10Q01780 885 aaKnown RBP20.34■□□□□ 0.85
GPC1-203ENST00000425056 TSGA10IPQ3SY00 556 aa20.34■□□□□ 0.85
GPC1-203ENST00000425056 WWC2Q6AWC2 1192 aa20.34■□□□□ 0.85
GPC1-203ENST00000425056 FAM117BQ6P1L5 589 aa20.34■□□□□ 0.85
GPC1-203ENST00000425056 TEX2Q8IWB9 1127 aa20.34■□□□□ 0.85
GPC1-203ENST00000425056 MYOCDQ8IZQ8 938 aa20.34■□□□□ 0.85
GPC1-203ENST00000425056 SEPT8Q92599 483 aa20.34■□□□□ 0.85
GPC1-203ENST00000425056 UHRF1Q96T88 793 aaPredicted RBP20.34■□□□□ 0.85
GPC1-203ENST00000425056 OSBPL7Q9BZF2 842 aa20.34■□□□□ 0.85
GPC1-203ENST00000425056 PCDHA6Q9UN73 950 aa20.34■□□□□ 0.85
GPC1-203ENST00000425056 COG5Q9UP83 839 aa20.34■□□□□ 0.85
GPC1-203ENST00000425056 INSL6Q9Y581 213 aa20.34■□□□□ 0.85
GPC1-203ENST00000425056 PCDHA8Q9Y5H6 950 aa20.34■□□□□ 0.85
GPC1-203ENST00000425056 MAFGO15525 162 aa20.33■□□□□ 0.85
GPC1-203ENST00000425056 BMP1P13497 986 aa20.33■□□□□ 0.85
GPC1-203ENST00000425056 FUT2Q10981 343 aa20.33■□□□□ 0.85
GPC1-203ENST00000425056 FAM26DQ5JW98 314 aa20.33■□□□□ 0.85
GPC1-203ENST00000425056 PPP1R18Q6NYC8 613 aa20.33■□□□□ 0.85
GPC1-203ENST00000425056 RPAINQ86UA6 219 aa20.33■□□□□ 0.85
GPC1-203ENST00000425056 SP7Q8TDD2 431 aaPredicted RBP20.33■□□□□ 0.85
GPC1-203ENST00000425056 SEPT1Q8WYJ6 367 aa20.33■□□□□ 0.85
GPC1-203ENST00000425056 EHMT1Q9H9B1 1298 aa20.33■□□□□ 0.85
GPC1-203ENST00000425056 SUGCTQ9HAC7 445 aa20.33■□□□□ 0.85
GPC1-203ENST00000425056 JADE2Q9NQC1 790 aa20.33■□□□□ 0.85
GPC1-203ENST00000425056 GSTTP1A0A1W2PQM5 241 aa20.32■□□□□ 0.84
GPC1-203ENST00000425056 RTN1Q16799 776 aa20.32■□□□□ 0.84
GPC1-203ENST00000425056 TYW1BQ6NUM6 668 aa20.32■□□□□ 0.84
GPC1-203ENST00000425056 TAF2Q6P1X5 1199 aa20.32■□□□□ 0.84
GPC1-203ENST00000425056 DHX32Q7L7V1 743 aaKnown RBP20.32■□□□□ 0.84
GPC1-203ENST00000425056 RASEFQ8IZ41 740 aa20.32■□□□□ 0.84
GPC1-203ENST00000425056 APBB2Q92870 758 aa20.32■□□□□ 0.84
GPC1-203ENST00000425056 TCEANC2Q96MN5 208 aa20.32■□□□□ 0.84
GPC1-203ENST00000425056 ERAP1Q9NZ08 941 aa20.32■□□□□ 0.84
GPC1-203ENST00000425056 MTUS1Q9ULD2 1270 aa20.32■□□□□ 0.84
GPC1-203ENST00000425056 BRPF3Q9ULD4 1205 aa20.32■□□□□ 0.84
GPC1-203ENST00000425056 BRWD1Q9NSI6 2320 aa20.31■□□□□ 0.84
GPC1-203ENST00000425056 hCG_1984214I3L0E3 225 aa20.31■□□□□ 0.84
GPC1-203ENST00000425056 ZBTB43O43298 467 aa20.31■□□□□ 0.84
GPC1-203ENST00000425056 CDC45O75419 566 aa20.31■□□□□ 0.84
GPC1-203ENST00000425056 KCNQ1P51787 676 aa20.31■□□□□ 0.84
GPC1-203ENST00000425056 NAPAP54920 295 aa20.31■□□□□ 0.84
GPC1-203ENST00000425056 PPFIA1Q13136 1202 aa20.31■□□□□ 0.84
GPC1-203ENST00000425056 ADCK5Q3MIX3 580 aa20.31■□□□□ 0.84
GPC1-203ENST00000425056 ZNF713Q8N859 430 aaPredicted RBP20.31■□□□□ 0.84
GPC1-203ENST00000425056 TOP1MTQ969P6 601 aa20.31■□□□□ 0.84
GPC1-203ENST00000425056 IFIH1Q9BYX4 1025 aaKnown RBP20.31■□□□□ 0.84
GPC1-203ENST00000425056 RIC8AQ9NPQ8 531 aa20.31■□□□□ 0.84
GPC1-203ENST00000425056 PKD2L1Q9P0L9 805 aa20.31■□□□□ 0.84
GPC1-203ENST00000425056 RALGAPA2Q2PPJ7 1873 aa20.3■□□□□ 0.84
GPC1-203ENST00000425056 NLRC5Q86WI3 1866 aa20.3■□□□□ 0.84
GPC1-203ENST00000425056 BDP1A6H8Y1 2624 aa20.3■□□□□ 0.84
GPC1-203ENST00000425056 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.3■□□□□ 0.84
GPC1-203ENST00000425056 MBLAC1A4D2B0 266 aaPredicted RBP20.3■□□□□ 0.84
GPC1-203ENST00000425056 MARK3P27448 753 aa20.3■□□□□ 0.84
GPC1-203ENST00000425056 RCAN1P53805 252 aa20.3■□□□□ 0.84
GPC1-203ENST00000425056 KRT32Q14532 448 aa20.3■□□□□ 0.84
GPC1-203ENST00000425056 GRIK4Q16099 956 aa20.3■□□□□ 0.84
GPC1-203ENST00000425056 RUFY4Q6ZNE9 571 aa20.3■□□□□ 0.84
GPC1-203ENST00000425056 SMARCAD1Q9H4L7 1026 aa20.3■□□□□ 0.84
GPC1-203ENST00000425056 JPH1Q9HDC5 661 aaPredicted RBP20.3■□□□□ 0.84
GPC1-203ENST00000425056 TUBE1Q9UJT0 475 aa20.3■□□□□ 0.84
GPC1-203ENST00000425056 STXBP3O00186 592 aa20.29■□□□□ 0.84
GPC1-203ENST00000425056 CHRNA1P02708 482 aa20.29■□□□□ 0.84
GPC1-203ENST00000425056 MGAT3Q09327 533 aa20.29■□□□□ 0.84
GPC1-203ENST00000425056 GLG1Q92896 1179 aa20.29■□□□□ 0.84
GPC1-203ENST00000425056 HLA-CQ95604 372 aa20.29■□□□□ 0.84
GPC1-203ENST00000425056 MXRA8Q9BRK3 442 aa20.29■□□□□ 0.84
GPC1-203ENST00000425056 C17orf80Q9BSJ5 609 aa20.29■□□□□ 0.84
GPC1-203ENST00000425056 KCNH7Q9NS40 1196 aa20.29■□□□□ 0.84
GPC1-203ENST00000425056 NFASCO94856 1347 aa20.28■□□□□ 0.84
GPC1-203ENST00000425056 KLF18A0A0U1RQI7 1052 aa20.28■□□□□ 0.84
GPC1-203ENST00000425056 GOLGA8AA7E2F4 631 aa20.28■□□□□ 0.84
GPC1-203ENST00000425056 GOLGA8BA8MQT2 603 aa20.28■□□□□ 0.84
GPC1-203ENST00000425056 FOSP01100 380 aaPredicted RBP20.28■□□□□ 0.84
GPC1-203ENST00000425056 HMGB1P09429 215 aaKnown RBP20.28■□□□□ 0.84
GPC1-203ENST00000425056 ADCY7P51828 1080 aa20.28■□□□□ 0.84
GPC1-203ENST00000425056 MARCH8Q5T0T0 291 aa20.28■□□□□ 0.84
GPC1-203ENST00000425056 FBXO22Q8NEZ5 403 aa20.28■□□□□ 0.84
GPC1-203ENST00000425056 SAMD11Q96NU1 681 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms