RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 MRPL12P52815 198 aaKnown RBP18.26■□□□□ 0.51
NPC1L1-203ENST00000423141 KRT71Q3SY84 523 aa18.26■□□□□ 0.51
NPC1L1-203ENST00000423141 ACCSLQ4AC99 568 aa18.26■□□□□ 0.51
NPC1L1-203ENST00000423141 LACTB2Q53H82 288 aaPredicted RBP18.26■□□□□ 0.51
NPC1L1-203ENST00000423141 GKAP1Q5VSY0 366 aaPredicted RBP18.26■□□□□ 0.51
NPC1L1-203ENST00000423141 DDX12PQ92771 950 aa18.26■□□□□ 0.51
NPC1L1-203ENST00000423141 SYN2Q92777 582 aaPredicted RBP18.26■□□□□ 0.51
NPC1L1-203ENST00000423141 TBC1D31Q96DN5 1066 aa18.26■□□□□ 0.51
NPC1L1-203ENST00000423141 CELF4Q9BZC1 486 aaKnown RBP18.26■□□□□ 0.51
NPC1L1-203ENST00000423141 TBC1D7Q9P0N9 293 aa18.26■□□□□ 0.51
NPC1L1-203ENST00000423141 NOC2LQ9Y3T9 749 aaKnown RBP18.26■□□□□ 0.51
NPC1L1-203ENST00000423141 MYH7BA7E2Y1 1941 aa18.26■□□□□ 0.51
NPC1L1-203ENST00000423141 CCDC189A1A4V9 331 aa18.26■□□□□ 0.51
NPC1L1-203ENST00000423141 GALNT17Q6IS24 598 aa18.26■□□□□ 0.51
NPC1L1-203ENST00000423141 TMC3Q7Z5M5 1100 aa18.26■□□□□ 0.51
NPC1L1-203ENST00000423141 ZMYND12Q9H0C1 365 aa18.26■□□□□ 0.51
NPC1L1-203ENST00000423141 TMEM260Q9NX78 707 aa18.26■□□□□ 0.51
NPC1L1-203ENST00000423141 BIN2Q9UBW5 565 aaPredicted RBP18.26■□□□□ 0.51
NPC1L1-203ENST00000423141 SMCO2A6NFE2 343 aa18.25■□□□□ 0.51
NPC1L1-203ENST00000423141 EZRP15311 586 aaKnown RBP18.25■□□□□ 0.51
NPC1L1-203ENST00000423141 USP11P51784 963 aa18.25■□□□□ 0.51
NPC1L1-203ENST00000423141 DGKHQ86XP1 1220 aa18.25■□□□□ 0.51
NPC1L1-203ENST00000423141 METTL13Q8N6R0 699 aa18.25■□□□□ 0.51
NPC1L1-203ENST00000423141 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.25■□□□□ 0.51
NPC1L1-203ENST00000423141 TSG101Q99816 390 aa18.25■□□□□ 0.51
NPC1L1-203ENST00000423141 ARPP21Q9UBL0 812 aaPredicted RBP18.25■□□□□ 0.51
NPC1L1-203ENST00000423141 BHMG1C9JSJ3 638 aaPredicted RBP18.25■□□□□ 0.51
NPC1L1-203ENST00000423141 TTI1O43156 1089 aa18.25■□□□□ 0.51
NPC1L1-203ENST00000423141 MGRN1O60291 552 aa18.25■□□□□ 0.51
NPC1L1-203ENST00000423141 PTK2Q05397 1052 aa18.25■□□□□ 0.51
NPC1L1-203ENST00000423141 DHX9Q08211 1270 aaKnown RBP18.25■□□□□ 0.51
NPC1L1-203ENST00000423141 CAVIN4Q5BKX8 364 aa18.25■□□□□ 0.51
NPC1L1-203ENST00000423141 AGBL2Q5U5Z8 902 aa18.25■□□□□ 0.51
NPC1L1-203ENST00000423141 TLDC1Q6P9B6 456 aa18.25■□□□□ 0.51
NPC1L1-203ENST00000423141 AEBP2Q6ZN18 517 aaPredicted RBP18.25■□□□□ 0.51
NPC1L1-203ENST00000423141 C3orf67Q6ZVT6 689 aa18.25■□□□□ 0.51
NPC1L1-203ENST00000423141 KRT25Q7Z3Z0 450 aa18.25■□□□□ 0.51
NPC1L1-203ENST00000423141 SLC44A5Q8NCS7 719 aa18.25■□□□□ 0.51
NPC1L1-203ENST00000423141 DPH5Q9H2P9 285 aa18.25■□□□□ 0.51
NPC1L1-203ENST00000423141 STX8Q9UNK0 236 aa18.25■□□□□ 0.51
NPC1L1-203ENST00000423141 KRIT1O00522 736 aa18.24■□□□□ 0.51
NPC1L1-203ENST00000423141 ZBTB48P10074 688 aaPredicted RBP18.24■□□□□ 0.51
NPC1L1-203ENST00000423141 CLNS1AP54105 237 aaKnown RBP18.24■□□□□ 0.51
NPC1L1-203ENST00000423141 EVA1CP58658 441 aa18.24■□□□□ 0.51
NPC1L1-203ENST00000423141 ELF3P78545 371 aaPredicted RBP18.24■□□□□ 0.51
NPC1L1-203ENST00000423141 ZCWPW2Q504Y3 356 aa18.24■□□□□ 0.51
NPC1L1-203ENST00000423141 LRRC57Q8N9N7 239 aa18.24■□□□□ 0.51
NPC1L1-203ENST00000423141 EIF1ADQ8N9N8 165 aaKnown RBP18.24■□□□□ 0.51
NPC1L1-203ENST00000423141 ACTRT1Q8TDG2 376 aa18.24■□□□□ 0.51
NPC1L1-203ENST00000423141 FAXDC2Q96IV6 333 aa18.24■□□□□ 0.51
NPC1L1-203ENST00000423141 CDK5RAP3Q96JB5 506 aa18.24■□□□□ 0.51
NPC1L1-203ENST00000423141 NUCKS1Q9H1E3 243 aaKnown RBP18.24■□□□□ 0.51
NPC1L1-203ENST00000423141 ATP8A2Q9NTI2 1148 aa18.24■□□□□ 0.51
NPC1L1-203ENST00000423141 SLC37A4O43826 429 aa18.24■□□□□ 0.51
NPC1L1-203ENST00000423141 ACTN1P12814 892 aa18.24■□□□□ 0.51
NPC1L1-203ENST00000423141 ASIC2Q16515 512 aa18.24■□□□□ 0.51
NPC1L1-203ENST00000423141 CCDC50Q8IVM0 306 aa18.24■□□□□ 0.51
NPC1L1-203ENST00000423141 NELFCDQ8IXH7 590 aa18.24■□□□□ 0.51
NPC1L1-203ENST00000423141 DHX37Q8IY37 1157 aaKnown RBP18.24■□□□□ 0.51
NPC1L1-203ENST00000423141 MAGEC3Q8TD91 643 aa18.24■□□□□ 0.51
NPC1L1-203ENST00000423141 TRIM31Q9BZY9 425 aa18.24■□□□□ 0.51
NPC1L1-203ENST00000423141 TAF1P21675 1872 aa18.24■□□□□ 0.51
NPC1L1-203ENST00000423141 TMCO5BA8MYB1 307 aa18.23■□□□□ 0.51
NPC1L1-203ENST00000423141 F8VZ95 297 aa18.23■□□□□ 0.51
NPC1L1-203ENST00000423141 PGRMC1O00264 195 aaKnown RBP18.23■□□□□ 0.51
NPC1L1-203ENST00000423141 FKBP3Q00688 224 aaKnown RBP18.23■□□□□ 0.51
NPC1L1-203ENST00000423141 ECM1Q16610 540 aa18.23■□□□□ 0.51
NPC1L1-203ENST00000423141 HIBCHQ6NVY1 386 aaPredicted RBP18.23■□□□□ 0.51
NPC1L1-203ENST00000423141 ZNF571Q7Z3V5 609 aaPredicted RBP18.23■□□□□ 0.51
NPC1L1-203ENST00000423141 MYOCDQ8IZQ8 938 aa18.23■□□□□ 0.51
NPC1L1-203ENST00000423141 RAD54LQ92698 747 aa18.23■□□□□ 0.51
NPC1L1-203ENST00000423141 PSMD1Q99460 953 aa18.23■□□□□ 0.51
NPC1L1-203ENST00000423141 VAT1LQ9HCJ6 419 aa18.23■□□□□ 0.51
NPC1L1-203ENST00000423141 PNMA2Q9UL42 364 aa18.23■□□□□ 0.51
NPC1L1-203ENST00000423141 CCDC88AQ3V6T2 1871 aa18.23■□□□□ 0.51
NPC1L1-203ENST00000423141 LAMB1P07942 1786 aa18.23■□□□□ 0.51
NPC1L1-203ENST00000423141 KLRF2D3W0D1 207 aa18.23■□□□□ 0.51
NPC1L1-203ENST00000423141 NTSR2O95665 410 aa18.23■□□□□ 0.51
NPC1L1-203ENST00000423141 ATP6V1G2O95670 118 aa18.23■□□□□ 0.51
NPC1L1-203ENST00000423141 GNAQP50148 359 aa18.23■□□□□ 0.51
NPC1L1-203ENST00000423141 PPP1R7Q15435 360 aa18.23■□□□□ 0.51
NPC1L1-203ENST00000423141 SBK1Q52WX2 424 aa18.23■□□□□ 0.51
NPC1L1-203ENST00000423141 MSL1Q68DK7 614 aa18.23■□□□□ 0.51
NPC1L1-203ENST00000423141 GJA10Q969M2 543 aa18.23■□□□□ 0.51
NPC1L1-203ENST00000423141 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.23■□□□□ 0.512e-6■□□□□ 9.5
NPC1L1-203ENST00000423141 NOD2Q9HC29 1040 aa18.23■□□□□ 0.51
NPC1L1-203ENST00000423141 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.23■□□□□ 0.513e-8■■■■□ 20.7
NPC1L1-203ENST00000423141 AIPL1Q9NZN9 384 aa18.23■□□□□ 0.51
NPC1L1-203ENST00000423141 BAIAP2L1Q9UHR4 511 aa18.23■□□□□ 0.51
NPC1L1-203ENST00000423141 KIAA1551Q9HCM1 1747 aa18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 PALM3A6NDB9 673 aaPredicted RBP18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 PPIP5K2O43314 1243 aa18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 CTNND1O60716 968 aaKnown RBP18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 DNAJC8O75937 253 aaPredicted RBP18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 CALCRLQ16602 461 aa18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 CHMP6Q96FZ7 201 aa18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 PBKQ96KB5 322 aa18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 MTMR9Q96QG7 549 aa18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 XPO6Q96QU8 1125 aaKnown RBP18.22■□□□□ 0.51
NPC1L1-203ENST00000423141 TMEM47Q9BQJ4 181 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms