RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 HSD17B14Q9BPX1 270 aa17.04■□□□□ 0.32
LRCH3-202ENST00000414675 NUP58Q9BVL2 599 aa17.04■□□□□ 0.32
LRCH3-202ENST00000414675 EMILIN3Q9NT22 766 aa17.04■□□□□ 0.32
LRCH3-202ENST00000414675 CNOT7Q9UIV1 285 aaKnown RBP17.04■□□□□ 0.32
LRCH3-202ENST00000414675 HACL1Q9UJ83 578 aa17.04■□□□□ 0.32
LRCH3-202ENST00000414675 NFIBO00712 420 aa17.03■□□□□ 0.32
LRCH3-202ENST00000414675 ZBED6P86452 979 aa17.03■□□□□ 0.32
LRCH3-202ENST00000414675 FKBP3Q00688 224 aaKnown RBP17.03■□□□□ 0.32
LRCH3-202ENST00000414675 TNFAIP1Q13829 316 aa17.03■□□□□ 0.32
LRCH3-202ENST00000414675 ERCC6LQ2NKX8 1250 aa17.03■□□□□ 0.32
LRCH3-202ENST00000414675 CEP55Q53EZ4 464 aa17.03■□□□□ 0.32
LRCH3-202ENST00000414675 NBPF12Q5TAG4 269 aaPredicted RBP17.03■□□□□ 0.32
LRCH3-202ENST00000414675 SFR1Q86XK3 245 aa17.03■□□□□ 0.32
LRCH3-202ENST00000414675 CCDC155Q8N6L0 562 aa17.03■□□□□ 0.32
LRCH3-202ENST00000414675 CLEC4DQ8WXI8 215 aa17.03■□□□□ 0.32
LRCH3-202ENST00000414675 ZBTB39O15060 712 aa17.03■□□□□ 0.32
LRCH3-202ENST00000414675 WDR46O15213 610 aaKnown RBP17.03■□□□□ 0.32
LRCH3-202ENST00000414675 MAP3K9P80192 1104 aa17.03■□□□□ 0.32
LRCH3-202ENST00000414675 FIGNQ5HY92 759 aa17.03■□□□□ 0.32
LRCH3-202ENST00000414675 PIGOQ8TEQ8 1089 aa17.03■□□□□ 0.32
LRCH3-202ENST00000414675 HOOK2Q96ED9 719 aa17.03■□□□□ 0.32
LRCH3-202ENST00000414675 DYDC2Q96IM9 177 aa17.03■□□□□ 0.32
LRCH3-202ENST00000414675 CARD6Q9BX69 1037 aa17.03■□□□□ 0.32
LRCH3-202ENST00000414675 KIAA1683Q9H0B3 1180 aa17.03■□□□□ 0.32
LRCH3-202ENST00000414675 DEFB129Q9H1M3 183 aa17.03■□□□□ 0.32
LRCH3-202ENST00000414675 COL4A3BPQ9Y5P4 624 aa17.03■□□□□ 0.32
LRCH3-202ENST00000414675 SLITRK3O94933 977 aa17.02■□□□□ 0.32
LRCH3-202ENST00000414675 HOXD13P35453 343 aa17.02■□□□□ 0.32
LRCH3-202ENST00000414675 HSD17B4P51659 736 aa17.02■□□□□ 0.32
LRCH3-202ENST00000414675 PPP2R5CQ13362 524 aa17.02■□□□□ 0.32
LRCH3-202ENST00000414675 PRPF38AQ8NAV1 312 aaKnown RBP17.02■□□□□ 0.32
LRCH3-202ENST00000414675 IL31RAQ8NI17 732 aa17.02■□□□□ 0.32
LRCH3-202ENST00000414675 FAM207AQ9NSI2 230 aaPredicted RBP17.02■□□□□ 0.32
LRCH3-202ENST00000414675 TRIM10Q9UDY6 481 aa17.02■□□□□ 0.32
LRCH3-202ENST00000414675 TFR2Q9UP52 801 aa17.02■□□□□ 0.32
LRCH3-202ENST00000414675 MRFAP1Q9Y605 127 aa17.02■□□□□ 0.32
LRCH3-202ENST00000414675 STK24Q9Y6E0 443 aa17.02■□□□□ 0.32
LRCH3-202ENST00000414675 FZD9O00144 591 aa17.01■□□□□ 0.31
LRCH3-202ENST00000414675 EYA4O95677 639 aa17.01■□□□□ 0.31
LRCH3-202ENST00000414675 HERVK_113P62684 666 aa17.01■□□□□ 0.31
LRCH3-202ENST00000414675 CBX1P83916 185 aa17.01■□□□□ 0.31
LRCH3-202ENST00000414675 ARHGAP29Q52LW3 1261 aa17.01■□□□□ 0.31
LRCH3-202ENST00000414675 ZNF569Q5MCW4 686 aa17.01■□□□□ 0.31
LRCH3-202ENST00000414675 CPXCR1Q8N123 301 aa17.01■□□□□ 0.31
LRCH3-202ENST00000414675 WRAP73Q9P2S5 460 aaPredicted RBP17.01■□□□□ 0.31
LRCH3-202ENST00000414675 RABGAP1Q9Y3P9 1069 aa17.01■□□□□ 0.31
LRCH3-202ENST00000414675 A0A1W2PQJ5 194 aa17.01■□□□□ 0.31
LRCH3-202ENST00000414675 KIF5CO60282 957 aa17.01■□□□□ 0.31
LRCH3-202ENST00000414675 CTNND1O60716 968 aaKnown RBP17.01■□□□□ 0.31
LRCH3-202ENST00000414675 GAS7O60861 476 aa17.01■□□□□ 0.31
LRCH3-202ENST00000414675 EPM2AIP1Q7L775 607 aaPredicted RBP17.01■□□□□ 0.31
LRCH3-202ENST00000414675 TPH2Q8IWU9 490 aa17.01■□□□□ 0.31
LRCH3-202ENST00000414675 UNC45AQ9H3U1 944 aa17.01■□□□□ 0.31
LRCH3-202ENST00000414675 RAVER2Q9HCJ3 691 aaKnown RBP17.01■□□□□ 0.31
LRCH3-202ENST00000414675 ZNF541Q9H0D2 1346 aa17.01■□□□□ 0.31
LRCH3-202ENST00000414675 LTBP3Q9NS15 1303 aa17■□□□□ 0.31
LRCH3-202ENST00000414675 MYBP10242 640 aa17■□□□□ 0.31
LRCH3-202ENST00000414675 ITGB5P18084 799 aa17■□□□□ 0.31
LRCH3-202ENST00000414675 MTMR2Q13614 643 aa17■□□□□ 0.31
LRCH3-202ENST00000414675 TSR1Q2NL82 804 aaKnown RBP17■□□□□ 0.31
LRCH3-202ENST00000414675 CCDC40Q4G0X9 1142 aa17■□□□□ 0.31
LRCH3-202ENST00000414675 MUM1L1Q5H9M0 696 aa17■□□□□ 0.31
LRCH3-202ENST00000414675 PRAMEF18Q5VWM3 479 aa17■□□□□ 0.31
LRCH3-202ENST00000414675 RINT1Q6NUQ1 792 aa17■□□□□ 0.31
LRCH3-202ENST00000414675 ZC3H3Q8IXZ2 948 aaKnown RBP17■□□□□ 0.31
LRCH3-202ENST00000414675 SLC35F6Q8N357 371 aa17■□□□□ 0.31
LRCH3-202ENST00000414675 SMCR8Q8TEV9 937 aaPredicted RBP17■□□□□ 0.31
LRCH3-202ENST00000414675 LPAR1Q92633 364 aa17■□□□□ 0.31
LRCH3-202ENST00000414675 CEP63Q96MT8 703 aa17■□□□□ 0.31
LRCH3-202ENST00000414675 ZNF577Q9BSK1 485 aa17■□□□□ 0.31
LRCH3-202ENST00000414675 TANGO6Q9C0B7 1094 aa17■□□□□ 0.31
LRCH3-202ENST00000414675 MMRN2Q9H8L6 949 aa17■□□□□ 0.31
LRCH3-202ENST00000414675 EHMT1Q9H9B1 1298 aa17■□□□□ 0.31
LRCH3-202ENST00000414675 TUFT1Q9NNX1 390 aa17■□□□□ 0.31
LRCH3-202ENST00000414675 FZD1Q9UP38 647 aa17■□□□□ 0.31
LRCH3-202ENST00000414675 DOCK1Q14185 1865 aa17■□□□□ 0.31
LRCH3-202ENST00000414675 RPTORQ8N122 1335 aa17■□□□□ 0.31
LRCH3-202ENST00000414675 TADA3O75528 432 aa17■□□□□ 0.31
LRCH3-202ENST00000414675 ALAS1P13196 640 aa17■□□□□ 0.31
LRCH3-202ENST00000414675 KCNMA1Q12791 1236 aa17■□□□□ 0.31
LRCH3-202ENST00000414675 B3GNT9Q6UX72 402 aa17■□□□□ 0.31
LRCH3-202ENST00000414675 SLC38A10Q9HBR0 1119 aa17■□□□□ 0.31
LRCH3-202ENST00000414675 HOMER2Q9NSB8 354 aa17■□□□□ 0.31
LRCH3-202ENST00000414675 PARP14Q460N5 1801 aa17■□□□□ 0.31
LRCH3-202ENST00000414675 SPDYE4A6NLX3 237 aa16.99■□□□□ 0.31
LRCH3-202ENST00000414675 PRPF6O94906 941 aaKnown RBP16.99■□□□□ 0.31
LRCH3-202ENST00000414675 PLEKP08567 350 aaPredicted RBP16.99■□□□□ 0.31
LRCH3-202ENST00000414675 VCAM1P19320 739 aa16.99■□□□□ 0.31
LRCH3-202ENST00000414675 GPIHBP1Q8IV16 184 aa16.99■□□□□ 0.31
LRCH3-202ENST00000414675 MXRA8Q9BRK3 442 aa16.99■□□□□ 0.31
LRCH3-202ENST00000414675 NHEJ1Q9H9Q4 299 aaPredicted RBP16.99■□□□□ 0.31
LRCH3-202ENST00000414675 SFI1A8K8P3 1242 aa16.99■□□□□ 0.31
LRCH3-202ENST00000414675 FBXO38Q6PIJ6 1188 aa16.99■□□□□ 0.31
LRCH3-202ENST00000414675 TRIM59Q8IWR1 403 aa16.99■□□□□ 0.31
LRCH3-202ENST00000414675 PKD2L1Q9P0L9 805 aa16.99■□□□□ 0.31
LRCH3-202ENST00000414675 CD2APQ9Y5K6 639 aa16.99■□□□□ 0.31
LRCH3-202ENST00000414675 IPO5O00410 1097 aaKnown RBP16.98■□□□□ 0.31
LRCH3-202ENST00000414675 FLOT1O75955 427 aa16.98■□□□□ 0.31
LRCH3-202ENST00000414675 MARSP56192 900 aaKnown RBP16.98■□□□□ 0.31
LRCH3-202ENST00000414675 SETQ01105 290 aaPredicted RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms