RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 BTNL10A8MVZ5 291 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 ATP5HO75947 161 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 CCNB1P14635 433 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 PPARDQ03181 441 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 PDXDC1Q6P996 788 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 TMEM154Q6P9G4 183 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 MFSD6Q6ZSS7 791 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 NKX2-3Q8TAU0 364 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 KIFAP3Q92845 792 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 NEUROG2Q9H2A3 272 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 RNPEPL1Q9HAU8 725 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 SPDYE5A6NIY4 337 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 KCNK3O14649 394 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 PRPF3O43395 683 aaKnown RBP6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 SERPING1P05155 500 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 PYGBP11216 843 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 DNA2P51530 1060 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 CCDC15Q0P6D6 951 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 MTA1Q13330 715 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 ADAM9Q13443 819 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 PARP6Q2NL67 630 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 TDRD12Q587J7 1177 aaKnown RBP6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 AKNAD1Q5T1N1 836 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 C6orf118Q5T5N4 469 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 IRGCQ6NXR0 463 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 ZNF790Q6PG37 636 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 PROSER2Q86WR7 435 aaPredicted RBP6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 COL23A1Q86Y22 540 aaPredicted RBP6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 CCDC82Q8N4S0 544 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 ABTB2Q8N961 1025 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 PLBD2Q8NHP8 589 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 SH3TC2Q8TF17 1288 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 FGD4Q96M96 766 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 FMO2Q99518 471 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.36□□□□□ -1.397e-13■□□□□ 9.5
R3HDM1-202ENST00000409478 CUEDC2Q9H467 287 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 MMRN2Q9H8L6 949 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 FAM207AQ9NSI2 230 aaPredicted RBP6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 TXLNGQ9NUQ3 528 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 ARL2BPQ9Y2Y0 163 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 TIAM2Q8IVF5 1701 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 RGS16O15492 202 aaPredicted RBP6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 KLRC4O43908 158 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 SP100P23497 879 aaPredicted RBP6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 PSMC4P43686 418 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 MAN2A1Q16706 1144 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 COBLL1Q53SF7 1204 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 EARS2Q5JPH6 523 aaKnown RBP6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 DENND2CQ68D51 928 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.36□□□□□ -1.399e-7■■■■■ 51.2
R3HDM1-202ENST00000409478 ZNF654Q8IZM8 581 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 ZNF513Q8N8E2 541 aaPredicted RBP6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 NEK9Q8TD19 979 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 STK32AQ8WU08 396 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 MAIP1Q8WWC4 291 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 FAM192AQ9GZU8 254 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 NAPBQ9H115 298 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 ARHGEF10LQ9HCE6 1279 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 SCOCQ9UIL1 159 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 A8MUI8 341 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 ATP5J2-PTCD1G3V325 749 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 PTCD1O75127 700 aaKnown RBP6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 GJB6O95452 261 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 LMNAP02545 664 aaKnown RBP6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 RNASE9P60153 205 aaKnown RBP6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 DIXDC1Q155Q3 683 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 RRP12Q5JTH9 1297 aaKnown RBP6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 C10orf76Q5T2E6 689 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 ANKRD40Q6AI12 368 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 DDX42Q86XP3 938 aaKnown RBP eCLIP6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 ARHGAP18Q8N392 663 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 NBPF15Q8N660 670 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 KCNV2Q8TDN2 545 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 BAP1Q92560 729 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 TNFRSF25Q93038 417 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 DMAP1Q9NPF5 467 aaPredicted RBP6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 CYP39A1Q9NYL5 469 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 AMOTL2Q9Y2J4 779 aa6.36□□□□□ -1.39
R3HDM1-202ENST00000409478 ARFGEF2Q9Y6D5 1785 aa6.35□□□□□ -1.39
R3HDM1-202ENST00000409478 PNPLA7Q6ZV29 1317 aa6.35□□□□□ -1.39
R3HDM1-202ENST00000409478 SETD1BQ9UPS6 1966 aaKnown RBP6.35□□□□□ -1.39
R3HDM1-202ENST00000409478 BCL9O00512 1426 aa6.35□□□□□ -1.39
R3HDM1-202ENST00000409478 MYH7P12883 1935 aa6.35□□□□□ -1.39
R3HDM1-202ENST00000409478 DAPK3O43293 454 aa6.35□□□□□ -1.39
R3HDM1-202ENST00000409478 ZPR1O75312 459 aa6.35□□□□□ -1.39
R3HDM1-202ENST00000409478 FLT3P36888 993 aa6.35□□□□□ -1.39
R3HDM1-202ENST00000409478 USP11P51784 963 aa6.35□□□□□ -1.39
R3HDM1-202ENST00000409478 RAD23BP54727 409 aa6.35□□□□□ -1.39
R3HDM1-202ENST00000409478 NLRP5P59047 1200 aa6.35□□□□□ -1.39
R3HDM1-202ENST00000409478 TCIRG1Q13488 830 aa6.35□□□□□ -1.39
R3HDM1-202ENST00000409478 PLS1Q14651 629 aa6.35□□□□□ -1.39
R3HDM1-202ENST00000409478 ZRSR2Q15696 482 aaKnown RBP6.35□□□□□ -1.39
R3HDM1-202ENST00000409478 PPP2R5EQ16537 467 aa6.35□□□□□ -1.39
R3HDM1-202ENST00000409478 LRP10Q7Z4F1 713 aa6.35□□□□□ -1.39
R3HDM1-202ENST00000409478 KIF2BQ8N4N8 673 aa6.35□□□□□ -1.39
R3HDM1-202ENST00000409478 ENDOVQ8N8Q3 282 aaKnown RBP6.35□□□□□ -1.39
R3HDM1-202ENST00000409478 DNAJC9Q8WXX5 260 aa6.35□□□□□ -1.39
R3HDM1-202ENST00000409478 ANKS1AQ92625 1134 aa6.35□□□□□ -1.39
R3HDM1-202ENST00000409478 PLEKHG4BQ96PX9 1271 aa6.35□□□□□ -1.39
R3HDM1-202ENST00000409478 SYT15Q9BQS2 421 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms