RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 AMACRQ9UHK6 382 aa15.09■□□□□ 0.01
COL6A2-203ENST00000397763 DDX25Q9UHL0 483 aaKnown RBP15.09■□□□□ 0.01
COL6A2-203ENST00000397763 CASZ1Q86V15 1759 aa15.09■□□□□ 0.01
COL6A2-203ENST00000397763 POTEFA5A3E0 1075 aa15.08■□□□□ 0.01
COL6A2-203ENST00000397763 SMIM23A6NLE4 172 aa15.08■□□□□ 0.01
COL6A2-203ENST00000397763 SFI1A8K8P3 1242 aa15.08■□□□□ 0.01
COL6A2-203ENST00000397763 PPP1R11O60927 126 aaPredicted RBP15.08■□□□□ 0.01
COL6A2-203ENST00000397763 SERPING1P05155 500 aa15.08■□□□□ 0.01
COL6A2-203ENST00000397763 POTEIP0CG38 1075 aa15.08■□□□□ 0.01
COL6A2-203ENST00000397763 MKRN4PQ13434 485 aaPredicted RBP15.08■□□□□ 0.01
COL6A2-203ENST00000397763 SHROOM1Q2M3G4 852 aaPredicted RBP15.08■□□□□ 0.01
COL6A2-203ENST00000397763 SWT1Q5T5J6 900 aaKnown RBP15.08■□□□□ 0.01
COL6A2-203ENST00000397763 POTEGQ6S5H5 508 aa15.08■□□□□ 0.01
COL6A2-203ENST00000397763 POTEEQ6S8J3 1075 aa15.08■□□□□ 0.01
COL6A2-203ENST00000397763 DPP8Q6V1X1 898 aaPredicted RBP15.08■□□□□ 0.01
COL6A2-203ENST00000397763 B4GALNT4Q76KP1 1039 aa15.08■□□□□ 0.01
COL6A2-203ENST00000397763 TEX2Q8IWB9 1127 aa15.08■□□□□ 0.01
COL6A2-203ENST00000397763 ZNF473Q8WTR7 871 aaKnown RBP15.08■□□□□ 0.01
COL6A2-203ENST00000397763 CAVIN3Q969G5 261 aa15.08■□□□□ 0.01
COL6A2-203ENST00000397763 SPAG5Q96R06 1193 aa15.08■□□□□ 0.01
COL6A2-203ENST00000397763 CCT8L2Q96SF2 557 aa15.08■□□□□ 0.01
COL6A2-203ENST00000397763 FAM196BA6NMK8 535 aa15.08■□□□□ 0
COL6A2-203ENST00000397763 MPHOSPH10O00566 681 aaKnown RBP15.08■□□□□ 0
COL6A2-203ENST00000397763 MEFVO15553 781 aaPredicted RBP15.08■□□□□ 0
COL6A2-203ENST00000397763 PJA2O43164 708 aa15.08■□□□□ 0
COL6A2-203ENST00000397763 PDHBP11177 359 aa15.08■□□□□ 0
COL6A2-203ENST00000397763 LRRC63Q05C16 580 aa15.08■□□□□ 0
COL6A2-203ENST00000397763 KCNH2Q12809 1159 aa15.08■□□□□ 0
COL6A2-203ENST00000397763 PRPF4BQ13523 1007 aaKnown RBP15.08■□□□□ 0
COL6A2-203ENST00000397763 ASIC2Q16515 512 aa15.08■□□□□ 0
COL6A2-203ENST00000397763 SPRED3Q2MJR0 410 aa15.08■□□□□ 0
COL6A2-203ENST00000397763 ZNF571Q7Z3V5 609 aaPredicted RBP15.08■□□□□ 0
COL6A2-203ENST00000397763 UHMK1Q8TAS1 419 aaKnown RBP15.08■□□□□ 0
COL6A2-203ENST00000397763 ANKS1AQ92625 1134 aa15.08■□□□□ 0
COL6A2-203ENST00000397763 INPP4AQ96PE3 977 aaPredicted RBP15.08■□□□□ 0
COL6A2-203ENST00000397763 ANKRD2Q9GZV1 360 aa15.08■□□□□ 0
COL6A2-203ENST00000397763 CEP72Q9P209 647 aa15.08■□□□□ 0
COL6A2-203ENST00000397763 PCDHA12Q9UN75 941 aa15.08■□□□□ 0
COL6A2-203ENST00000397763 PVALEFA0A1B0GWK0 134 aa15.08■□□□□ 0
COL6A2-203ENST00000397763 CLIC2O15247 247 aa15.08■□□□□ 0
COL6A2-203ENST00000397763 AKR1B1P15121 316 aa15.08■□□□□ 0
COL6A2-203ENST00000397763 PSMC6P62333 389 aa15.08■□□□□ 0
COL6A2-203ENST00000397763 SF3B2Q13435 895 aaKnown RBP15.08■□□□□ 0
COL6A2-203ENST00000397763 LLGL1Q15334 1064 aa15.08■□□□□ 0
COL6A2-203ENST00000397763 RPS6KA1Q15418 735 aa15.08■□□□□ 0
COL6A2-203ENST00000397763 SLC18A3Q16572 532 aa15.08■□□□□ 0
COL6A2-203ENST00000397763 MEI1Q5TIA1 1274 aa15.08■□□□□ 0
COL6A2-203ENST00000397763 SCLT1Q96NL6 688 aa15.08■□□□□ 0
COL6A2-203ENST00000397763 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.08■□□□□ 01e-7■■■■■ 115.4
COL6A2-203ENST00000397763 AJAP1Q9UKB5 411 aaPredicted RBP15.08■□□□□ 0
COL6A2-203ENST00000397763 RTCBQ9Y3I0 505 aaKnown RBP15.08■□□□□ 0
COL6A2-203ENST00000397763 USP17L10C9JJH3 530 aa15.07■□□□□ 0
COL6A2-203ENST00000397763 DAPK3O43293 454 aa15.07■□□□□ 0
COL6A2-203ENST00000397763 FGFR1OPO95684 399 aaKnown RBP15.07■□□□□ 0
COL6A2-203ENST00000397763 HSD17B3P37058 310 aa15.07■□□□□ 0
COL6A2-203ENST00000397763 KCNA1Q09470 495 aa15.07■□□□□ 0
COL6A2-203ENST00000397763 SCFD1Q8WVM8 642 aa15.07■□□□□ 0
COL6A2-203ENST00000397763 MXD3Q9BW11 206 aa15.07■□□□□ 0
COL6A2-203ENST00000397763 RTFDC1Q9BY42 306 aaPredicted RBP15.07■□□□□ 0
COL6A2-203ENST00000397763 PPP1R37O75864 691 aa15.07■□□□□ 0
COL6A2-203ENST00000397763 NR2F2P24468 414 aa15.07■□□□□ 0
COL6A2-203ENST00000397763 TM4SF1P30408 202 aa15.07■□□□□ 0
COL6A2-203ENST00000397763 CTNNA1P35221 906 aaKnown RBP15.07■□□□□ 0
COL6A2-203ENST00000397763 CYP4A11Q02928 519 aa15.07■□□□□ 0
COL6A2-203ENST00000397763 PABPC4Q13310 644 aaKnown RBP eCLIP15.07■□□□□ 0
COL6A2-203ENST00000397763 PTGISQ16647 500 aa15.07■□□□□ 0
COL6A2-203ENST00000397763 ZNF572Q7Z3I7 529 aaPredicted RBP15.07■□□□□ 0
COL6A2-203ENST00000397763 NLRP14Q86W24 1093 aa15.07■□□□□ 0
COL6A2-203ENST00000397763 USP38Q8NB14 1042 aa15.07■□□□□ 0
COL6A2-203ENST00000397763 ATP6V1G3Q96LB4 118 aa15.07■□□□□ 0
COL6A2-203ENST00000397763 NR2E1Q9Y466 385 aa15.07■□□□□ 0
COL6A2-203ENST00000397763 MYCNP04198 464 aaPredicted RBP15.06■□□□□ 0
COL6A2-203ENST00000397763 CCDC172P0C7W6 258 aa15.06■□□□□ 0
COL6A2-203ENST00000397763 E2F5Q15329 346 aa15.06■□□□□ 0
COL6A2-203ENST00000397763 CDC37Q16543 378 aaPredicted RBP15.06■□□□□ 0
COL6A2-203ENST00000397763 QPCTQ16769 361 aa15.06■□□□□ 0
COL6A2-203ENST00000397763 FAM98CQ17RN3 349 aaKnown RBP15.06■□□□□ 0
COL6A2-203ENST00000397763 KIRREL3Q8IZU9 778 aa15.06■□□□□ 0
COL6A2-203ENST00000397763 NEDD1Q8NHV4 660 aa15.06■□□□□ 0
COL6A2-203ENST00000397763 MYCBPAPQ8TBZ2 947 aa15.06■□□□□ 0
COL6A2-203ENST00000397763 MDM1Q8TC05 714 aa15.06■□□□□ 0
COL6A2-203ENST00000397763 EMILIN3Q9NT22 766 aa15.06■□□□□ 0
COL6A2-203ENST00000397763 STK17AQ9UEE5 414 aa15.06■□□□□ 0
COL6A2-203ENST00000397763 CHORDC1Q9UHD1 332 aaPredicted RBP15.06■□□□□ 0
COL6A2-203ENST00000397763 SUFUQ9UMX1 484 aa15.06■□□□□ 0
COL6A2-203ENST00000397763 CDR1P51861 262 aa15.06■□□□□ 0
COL6A2-203ENST00000397763 SKOR1P84550 965 aa15.06■□□□□ 0
COL6A2-203ENST00000397763 UAP1Q16222 522 aaPredicted RBP15.06■□□□□ 0
COL6A2-203ENST00000397763 CLEC4GQ6UXB4 293 aa15.06■□□□□ 0
COL6A2-203ENST00000397763 TPTE2Q6XPS3 522 aa15.06■□□□□ 0
COL6A2-203ENST00000397763 KSR1Q8IVT5 923 aa15.06■□□□□ 0
COL6A2-203ENST00000397763 CNPY4Q8N129 248 aa15.06■□□□□ 0
COL6A2-203ENST00000397763 BANK1Q8NDB2 785 aa15.06■□□□□ 0
COL6A2-203ENST00000397763 WDR66Q8TBY9 1149 aa15.06■□□□□ 0
COL6A2-203ENST00000397763 CCDC114Q96M63 670 aa15.06■□□□□ 0
COL6A2-203ENST00000397763 EPN3Q9H201 632 aa15.06■□□□□ 0
COL6A2-203ENST00000397763 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.06■□□□□ 0
COL6A2-203ENST00000397763 MYH1P12882 1939 aa15.06■□□□□ 0
COL6A2-203ENST00000397763 DOT1LQ8TEK3 1739 aa15.06■□□□□ 0
COL6A2-203ENST00000397763 EP400Q96L91 3159 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 183.9 ms