RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 GAS2L1Q99501 681 aaPredicted RBP15.69■□□□□ 0.1
CXCL12-205ENST00000395794 AGXT2Q9BYV1 514 aa15.69■□□□□ 0.1
CXCL12-205ENST00000395794 TM6SF1Q9BZW5 370 aa15.69■□□□□ 0.1
CXCL12-205ENST00000395794 NKX2-4Q9H2Z4 354 aa15.69■□□□□ 0.1
CXCL12-205ENST00000395794 RNPEPQ9H4A4 650 aa15.69■□□□□ 0.1
CXCL12-205ENST00000395794 JPH1Q9HDC5 661 aaPredicted RBP15.69■□□□□ 0.1
CXCL12-205ENST00000395794 KCNH7Q9NS40 1196 aa15.69■□□□□ 0.1
CXCL12-205ENST00000395794 ERAP1Q9NZ08 941 aa15.69■□□□□ 0.1
CXCL12-205ENST00000395794 NID2Q14112 1375 aa15.68■□□□□ 0.1
CXCL12-205ENST00000395794 RSPH10B2B2RC85 870 aa15.68■□□□□ 0.1
CXCL12-205ENST00000395794 EIF5BO60841 1220 aaKnown RBP15.68■□□□□ 0.1
CXCL12-205ENST00000395794 EFCAB14O75071 495 aa15.68■□□□□ 0.1
CXCL12-205ENST00000395794 RSPH10BP0C881 870 aa15.68■□□□□ 0.1
CXCL12-205ENST00000395794 PDIA3P30101 505 aaKnown RBP15.68■□□□□ 0.1
CXCL12-205ENST00000395794 SREBF1P36956 1147 aa15.68■□□□□ 0.1
CXCL12-205ENST00000395794 CCT2P78371 535 aaKnown RBP15.68■□□□□ 0.1
CXCL12-205ENST00000395794 ARHGAP4P98171 946 aa15.68■□□□□ 0.1
CXCL12-205ENST00000395794 IKBKEQ14164 716 aa15.68■□□□□ 0.1
CXCL12-205ENST00000395794 JAKMIP3Q5VZ66 844 aa15.68■□□□□ 0.1
CXCL12-205ENST00000395794 PPP2R2DQ66LE6 453 aa15.68■□□□□ 0.1
CXCL12-205ENST00000395794 CPLX2Q6PUV4 134 aaKnown RBP15.68■□□□□ 0.1
CXCL12-205ENST00000395794 TRIM22Q8IYM9 498 aa15.68■□□□□ 0.1
CXCL12-205ENST00000395794 REXO1Q8N1G1 1221 aaKnown RBP15.68■□□□□ 0.1
CXCL12-205ENST00000395794 CCDC148Q8NFR7 591 aa15.68■□□□□ 0.1
CXCL12-205ENST00000395794 PHKBQ93100 1093 aa15.68■□□□□ 0.1
CXCL12-205ENST00000395794 SLC26A6Q9BXS9 759 aa15.68■□□□□ 0.1
CXCL12-205ENST00000395794 RNF26Q9BY78 433 aaPredicted RBP15.68■□□□□ 0.1
CXCL12-205ENST00000395794 SMARCAD1Q9H4L7 1026 aa15.68■□□□□ 0.1
CXCL12-205ENST00000395794 AZI2Q9H6S1 392 aa15.68■□□□□ 0.1
CXCL12-205ENST00000395794 SETD4Q9NVD3 440 aa15.68■□□□□ 0.1
CXCL12-205ENST00000395794 TMEM260Q9NX78 707 aa15.68■□□□□ 0.1
CXCL12-205ENST00000395794 MYH7BA7E2Y1 1941 aa15.68■□□□□ 0.1
CXCL12-205ENST00000395794 NRCAMQ92823 1304 aa15.68■□□□□ 0.1
CXCL12-205ENST00000395794 ABHD14A-ACY1A0A1B0GW23 586 aa15.67■□□□□ 0.1
CXCL12-205ENST00000395794 ESYT2A0FGR8 921 aa15.67■□□□□ 0.1
CXCL12-205ENST00000395794 CPLX1O14810 134 aa15.67■□□□□ 0.1
CXCL12-205ENST00000395794 TREHO43280 583 aa15.67■□□□□ 0.1
CXCL12-205ENST00000395794 NBNO60934 754 aa15.67■□□□□ 0.1
CXCL12-205ENST00000395794 CAND2O75155 1236 aa15.67■□□□□ 0.1
CXCL12-205ENST00000395794 CXCL10P02778 98 aa15.67■□□□□ 0.1
CXCL12-205ENST00000395794 IFNAR1P17181 557 aa15.67■□□□□ 0.1
CXCL12-205ENST00000395794 CLK2P49760 499 aaKnown RBP15.67■□□□□ 0.1
CXCL12-205ENST00000395794 EVCP57679 992 aa15.67■□□□□ 0.1
CXCL12-205ENST00000395794 TRIM71Q2Q1W2 868 aaKnown RBP15.67■□□□□ 0.1
CXCL12-205ENST00000395794 HERC6Q8IVU3 1022 aa15.67■□□□□ 0.1
CXCL12-205ENST00000395794 ZBED2Q9BTP6 218 aa15.67■□□□□ 0.1
CXCL12-205ENST00000395794 ZMYND12Q9H0C1 365 aa15.67■□□□□ 0.1
CXCL12-205ENST00000395794 SLC9A2Q9UBY0 812 aa15.67■□□□□ 0.1
CXCL12-205ENST00000395794 YBX2Q9Y2T7 364 aaKnown RBP15.67■□□□□ 0.1
CXCL12-205ENST00000395794 GSTTP1A0A1W2PQM5 241 aa15.66■□□□□ 0.1
CXCL12-205ENST00000395794 LGR5O75473 907 aa15.66■□□□□ 0.1
CXCL12-205ENST00000395794 MARK3P27448 753 aa15.66■□□□□ 0.1
CXCL12-205ENST00000395794 HOXC8P31273 242 aa15.66■□□□□ 0.1
CXCL12-205ENST00000395794 PPFIA1Q13136 1202 aa15.66■□□□□ 0.1
CXCL12-205ENST00000395794 HIC1Q14526 733 aa15.66■□□□□ 0.1
CXCL12-205ENST00000395794 NIPA1Q7RTP0 329 aa15.66■□□□□ 0.1
CXCL12-205ENST00000395794 CYP2W1Q8TAV3 490 aa15.66■□□□□ 0.1
CXCL12-205ENST00000395794 WNT8BQ93098 351 aa15.66■□□□□ 0.1
CXCL12-205ENST00000395794 ZNF274Q96GC6 653 aaPredicted RBP15.66■□□□□ 0.1
CXCL12-205ENST00000395794 UPF3BQ9BZI7 483 aaKnown RBP15.66■□□□□ 0.1
CXCL12-205ENST00000395794 PRDM12Q9H4Q4 367 aa15.66■□□□□ 0.1
CXCL12-205ENST00000395794 NCOA5Q9HCD5 579 aaKnown RBP15.66■□□□□ 0.1
CXCL12-205ENST00000395794 AGO4Q9HCK5 861 aaKnown RBP15.66■□□□□ 0.1
CXCL12-205ENST00000395794 PDRG1Q9NUG6 133 aa15.66■□□□□ 0.1
CXCL12-205ENST00000395794 TELO2Q9Y4R8 837 aa15.66■□□□□ 0.1
CXCL12-205ENST00000395794 NFASCO94856 1347 aa15.66■□□□□ 0.1
CXCL12-205ENST00000395794 MEIS1O00470 390 aa15.65■□□□□ 0.1
CXCL12-205ENST00000395794 TLL1O43897 1013 aa15.65■□□□□ 0.1
CXCL12-205ENST00000395794 ARP10275 920 aa15.65■□□□□ 0.1
CXCL12-205ENST00000395794 MYOGP15173 224 aa15.65■□□□□ 0.1
CXCL12-205ENST00000395794 WDR5P61964 334 aaKnown RBP15.65■□□□□ 0.1
CXCL12-205ENST00000395794 SSRP1Q08945 709 aaKnown RBP15.65■□□□□ 0.1
CXCL12-205ENST00000395794 PKN1Q16512 942 aa15.65■□□□□ 0.1
CXCL12-205ENST00000395794 TAF2Q6P1X5 1199 aa15.65■□□□□ 0.1
CXCL12-205ENST00000395794 RSPH3Q86UC2 560 aa15.65■□□□□ 0.1
CXCL12-205ENST00000395794 LMBR1Q8WVP7 490 aa15.65■□□□□ 0.1
CXCL12-205ENST00000395794 TCEAL9Q9UHQ7 104 aa15.65■□□□□ 0.1
CXCL12-205ENST00000395794 COL6A3P12111 3177 aa15.65■□□□□ 0.1
CXCL12-205ENST00000395794 PPFIA3O75145 1194 aa15.64■□□□□ 0.09
CXCL12-205ENST00000395794 CA3P07451 260 aa15.64■□□□□ 0.09
CXCL12-205ENST00000395794 IGFBP4P22692 258 aa15.64■□□□□ 0.09
CXCL12-205ENST00000395794 FXR2P51116 673 aaKnown RBP eCLIP15.64■□□□□ 0.09
CXCL12-205ENST00000395794 NLRP5P59047 1200 aa15.64■□□□□ 0.09
CXCL12-205ENST00000395794 ACTR2P61160 394 aa15.64■□□□□ 0.09
CXCL12-205ENST00000395794 TOB2Q14106 344 aaPredicted RBP15.64■□□□□ 0.09
CXCL12-205ENST00000395794 GPNMBQ14956 572 aa15.64■□□□□ 0.09
CXCL12-205ENST00000395794 NTRK3Q16288 839 aa15.64■□□□□ 0.09
CXCL12-205ENST00000395794 PLA2G4DQ86XP0 818 aa15.64■□□□□ 0.09
CXCL12-205ENST00000395794 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.64■□□□□ 0.09
CXCL12-205ENST00000395794 SEPT8Q92599 483 aa15.64■□□□□ 0.09
CXCL12-205ENST00000395794 SH3GLB2Q9NR46 395 aa15.64■□□□□ 0.09
CXCL12-205ENST00000395794 TRPC6Q9Y210 931 aa15.64■□□□□ 0.09
CXCL12-205ENST00000395794 TANC1Q9C0D5 1861 aa15.63■□□□□ 0.09
CXCL12-205ENST00000395794 RRN3P2A6NIE6 340 aa15.63■□□□□ 0.09
CXCL12-205ENST00000395794 CDKL5O76039 1030 aa15.63■□□□□ 0.09
CXCL12-205ENST00000395794 AMHP03971 560 aa15.63■□□□□ 0.09
CXCL12-205ENST00000395794 RPLP2P05387 115 aaKnown RBP15.63■□□□□ 0.09
CXCL12-205ENST00000395794 CYP3A4P08684 503 aa15.63■□□□□ 0.09
CXCL12-205ENST00000395794 CTSHP09668 335 aa15.63■□□□□ 0.09
CXCL12-205ENST00000395794 STAT5BP51692 787 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms