RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 RINT1Q6NUQ1 792 aa9.45□□□□□ -0.9
GAPVD1-204ENST00000394083 CNKSR1Q969H4 720 aa9.45□□□□□ -0.9
GAPVD1-204ENST00000394083 CNOT6LQ96LI5 555 aaKnown RBP9.45□□□□□ -0.9
GAPVD1-204ENST00000394083 BAG1Q99933 345 aaPredicted RBP9.45□□□□□ -0.9
GAPVD1-204ENST00000394083 LZTS2Q9BRK4 669 aa9.45□□□□□ -0.9
GAPVD1-204ENST00000394083 PLA2G4AP47712 749 aa9.45□□□□□ -0.9
GAPVD1-204ENST00000394083 TMEM132BQ14DG7 1078 aa9.45□□□□□ -0.9
GAPVD1-204ENST00000394083 SAFBQ15424 915 aaKnown RBP eCLIP9.45□□□□□ -0.9
GAPVD1-204ENST00000394083 TBC1D10BQ4KMP7 808 aaPredicted RBP9.45□□□□□ -0.9
GAPVD1-204ENST00000394083 PRR16Q569H4 304 aa9.45□□□□□ -0.9
GAPVD1-204ENST00000394083 GPATCH4Q5T3I0 446 aaKnown RBP9.45□□□□□ -0.9
GAPVD1-204ENST00000394083 UNC13DQ70J99 1090 aa9.45□□□□□ -0.9
GAPVD1-204ENST00000394083 FAM83AQ86UY5 434 aa9.45□□□□□ -0.9
GAPVD1-204ENST00000394083 ERGIC2Q96RQ1 377 aa9.45□□□□□ -0.9
GAPVD1-204ENST00000394083 ABCB11O95342 1321 aa9.45□□□□□ -0.9
GAPVD1-204ENST00000394083 LAD1O00515 517 aa9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 BMP3P12645 472 aa9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 CTTNQ14247 550 aaKnown RBP9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 FLAD1Q8NFF5 587 aa9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 TUBGCP2Q9BSJ2 902 aa9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 GOLPH3Q9H4A6 298 aa9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 LTBP3Q9NS15 1303 aa9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 RPA1P27694 616 aa9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 SYT2Q8N9I0 419 aaPredicted RBP9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 CXCL16Q9H2A7 254 aa9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 TXNRD2Q9NNW7 524 aa9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 FAM13BQ9NYF5 915 aa9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 LRWD1Q9UFC0 647 aa9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 SMTNL1A8MU46 457 aa9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 BECN2A8MW95 431 aa9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 ZBTB42B2RXF5 422 aa9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 TP73O15350 636 aa9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 CCNE1P24864 410 aa9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 PPP2R5CQ13362 524 aa9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 PPP1R18Q6NYC8 613 aa9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 GPRC5CQ9NQ84 441 aa9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 DMAC2Q9NW81 257 aa9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 DYNC1I1O14576 645 aa9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 SEC31AO94979 1220 aaKnown RBP9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 ATP1A1P05023 1023 aaKnown RBP9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 NMT1P30419 496 aaKnown RBP9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 JAM2P57087 298 aa9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 SYCP1Q15431 976 aa9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 ZRSR1Q15695 479 aaKnown RBP9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 AK8Q96MA6 479 aa9.44□□□□□ -0.9
GAPVD1-204ENST00000394083 BHMG1C9JSJ3 638 aaPredicted RBP9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 GOLGA6L19H0YKK7 550 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 ENC1O14682 589 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 SERPINC1P01008 464 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 SLC9A1P19634 815 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 GNL2Q13823 731 aaKnown RBP9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 CCDC174Q6PII3 467 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 LDHDQ86WU2 507 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 PRIMPOLQ96LW4 560 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 PCYT2Q99447 389 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 PRDM4Q9UKN5 801 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 ADCY6O43306 1168 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 FAM189A1O60320 539 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 PDE4DQ08499 809 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 PABPC4Q13310 644 aaKnown RBP eCLIP9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 ANO5Q75V66 913 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 MICALL2Q8IY33 904 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 TAAR1Q96RJ0 339 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 EIF2AK1Q9BQI3 630 aaKnown RBP9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 TBC1D8O95759 1140 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 USP11P51784 963 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 MAMDC4Q6UXC1 1216 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 SNX29Q8TEQ0 813 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 CUL5Q93034 780 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 SLC35C1Q96A29 364 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 LZTFL1Q9NQ48 299 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 SNCAIPQ9Y6H5 919 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 CITO14578 2027 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 PLA2G6O60733 806 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 PLA2G4BP0C869 781 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 PTPRAP18433 802 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 NT5C2P49902 561 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 MRPS25P82663 173 aaKnown RBP9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 MTMR2Q13614 643 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 FKBP1CQ5VVH2 108 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 FAM177A1Q8N128 213 aaPredicted RBP9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 ARID3AQ99856 593 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 C6orf50Q9HD87 102 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 PLAGL2Q9UPG8 496 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 CEP131Q9UPN4 1083 aa9.43□□□□□ -0.9
GAPVD1-204ENST00000394083 DRP2Q13474 957 aa9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 BMT2Q1RMZ1 405 aa9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 NCAPH2Q6IBW4 605 aa9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 AGBL3Q8NEM8 1001 aa9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 SYTL5Q8TDW5 730 aaPredicted RBP9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 UPF1Q92900 1129 aaKnown RBP eCLIP9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 CLMNQ96JQ2 1002 aa9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 CCDC17Q96LX7 622 aa9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 BTBD7Q9P203 1132 aa9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 HERC5Q9UII4 1024 aaKnown RBP9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 PCDHA12Q9UN75 941 aa9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 USP2O75604 605 aaPredicted RBP9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 PTMAP06454 111 aaKnown RBP9.42□□□□□ -0.9
GAPVD1-204ENST00000394083 GNAQP50148 359 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms