RNA–Protein interactions for RNA: ENST00000393655.3

TFAP2B-202, Transcript of transcription factor AP-2 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAP2B, Length 5,773 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2B-202ENST00000393655 CDR2Q01850 454 aa17.45■□□□□ 0.38
TFAP2B-202ENST00000393655 PIGBQ92521 554 aa17.45■□□□□ 0.38
TFAP2B-202ENST00000393655 EMILIN3Q9NT22 766 aa17.45■□□□□ 0.38
TFAP2B-202ENST00000393655 STK38LQ9Y2H1 464 aa17.45■□□□□ 0.38
TFAP2B-202ENST00000393655 POC1B-GALNT4F8VUJ3 575 aa17.45■□□□□ 0.38
TFAP2B-202ENST00000393655 PRKAB2O43741 272 aa17.45■□□□□ 0.38
TFAP2B-202ENST00000393655 CRKP46108 304 aa17.45■□□□□ 0.38
TFAP2B-202ENST00000393655 UBE2SQ16763 222 aa17.45■□□□□ 0.38
TFAP2B-202ENST00000393655 FASTKD5Q7L8L6 764 aaKnown RBP17.45■□□□□ 0.38
TFAP2B-202ENST00000393655 SH3GLB2Q9NR46 395 aa17.45■□□□□ 0.38
TFAP2B-202ENST00000393655 ERBB3P21860 1342 aa17.45■□□□□ 0.38
TFAP2B-202ENST00000393655 NVLO15381 856 aaKnown RBP17.45■□□□□ 0.38
TFAP2B-202ENST00000393655 STMN1P16949 149 aa17.45■□□□□ 0.38
TFAP2B-202ENST00000393655 PRPF38AQ8NAV1 312 aaKnown RBP17.45■□□□□ 0.38
TFAP2B-202ENST00000393655 ECEL1O95672 775 aa17.45■□□□□ 0.38
TFAP2B-202ENST00000393655 SOX5P35711 763 aa17.45■□□□□ 0.38
TFAP2B-202ENST00000393655 SRRM1Q8IYB3 904 aaKnown RBP17.45■□□□□ 0.38
TFAP2B-202ENST00000393655 TTC25Q96NG3 672 aa17.45■□□□□ 0.38
TFAP2B-202ENST00000393655 TOPORSQ9NS56 1045 aaPredicted RBP17.45■□□□□ 0.38
TFAP2B-202ENST00000393655 RECQLP46063 649 aaPredicted RBP17.45■□□□□ 0.38
TFAP2B-202ENST00000393655 KCNQ4P56696 695 aa17.45■□□□□ 0.38
TFAP2B-202ENST00000393655 ATP6V0A4Q9HBG4 840 aa17.45■□□□□ 0.38
TFAP2B-202ENST00000393655 DDIT3P35638 169 aa17.44■□□□□ 0.38
TFAP2B-202ENST00000393655 GNGT1P63211 74 aa17.44■□□□□ 0.38
TFAP2B-202ENST00000393655 NAA35Q5VZE5 725 aa17.44■□□□□ 0.38
TFAP2B-202ENST00000393655 PPP4R3CPQ6ZMV5 832 aa17.44■□□□□ 0.38
TFAP2B-202ENST00000393655 MYRIPQ8NFW9 859 aa17.44■□□□□ 0.38
TFAP2B-202ENST00000393655 CD58P19256 250 aa17.44■□□□□ 0.38
TFAP2B-202ENST00000393655 MSH2P43246 934 aa17.44■□□□□ 0.38
TFAP2B-202ENST00000393655 SF3A3Q12874 501 aaKnown RBP eCLIP17.44■□□□□ 0.38
TFAP2B-202ENST00000393655 SUSD4Q5VX71 490 aa17.44■□□□□ 0.38
TFAP2B-202ENST00000393655 SPATS2Q86XZ4 545 aaKnown RBP17.44■□□□□ 0.38
TFAP2B-202ENST00000393655 LRRN2O75325 713 aa17.44■□□□□ 0.38
TFAP2B-202ENST00000393655 HSPA6P17066 643 aa17.44■□□□□ 0.38
TFAP2B-202ENST00000393655 PHKA2P46019 1235 aa17.44■□□□□ 0.38
TFAP2B-202ENST00000393655 MUM1Q2TAK8 710 aa17.44■□□□□ 0.38
TFAP2B-202ENST00000393655 MFSD14CQ5VZR4 134 aa17.44■□□□□ 0.38
TFAP2B-202ENST00000393655 OR6B3Q8NGW1 331 aa17.44■□□□□ 0.38
TFAP2B-202ENST00000393655 GDAP1L1Q96MZ0 367 aa17.44■□□□□ 0.38
TFAP2B-202ENST00000393655 MID2Q9UJV3 735 aa17.44■□□□□ 0.38
TFAP2B-202ENST00000393655 DENND3A2RUS2 1198 aa17.44■□□□□ 0.38
TFAP2B-202ENST00000393655 USP17L5A8MUK1 530 aa17.44■□□□□ 0.38
TFAP2B-202ENST00000393655 DHX38Q92620 1227 aaKnown RBP17.44■□□□□ 0.38
TFAP2B-202ENST00000393655 POLIQ9UNA4 740 aa17.44■□□□□ 0.38
TFAP2B-202ENST00000393655 NFX1Q12986 1120 aaKnown RBP17.43■□□□□ 0.38
TFAP2B-202ENST00000393655 CALN1Q9BXU9 219 aa17.43■□□□□ 0.38
TFAP2B-202ENST00000393655 EFCAB8A8MWE9 144 aa17.43■□□□□ 0.38
TFAP2B-202ENST00000393655 TSPY1Q01534 308 aa17.43■□□□□ 0.38
TFAP2B-202ENST00000393655 THAP9Q9H5L6 903 aa17.43■□□□□ 0.38
TFAP2B-202ENST00000393655 SCARA5Q6ZMJ2 495 aa17.43■□□□□ 0.38
TFAP2B-202ENST00000393655 UHMK1Q8TAS1 419 aaKnown RBP17.43■□□□□ 0.38
TFAP2B-202ENST00000393655 RWDD2AQ9UIY3 292 aa17.43■□□□□ 0.38
TFAP2B-202ENST00000393655 CASP14P31944 242 aa17.43■□□□□ 0.38
TFAP2B-202ENST00000393655 CLNS1AP54105 237 aaKnown RBP17.43■□□□□ 0.38
TFAP2B-202ENST00000393655 DDX27Q96GQ7 796 aaKnown RBP17.43■□□□□ 0.38
TFAP2B-202ENST00000393655 BRIP1Q9BX63 1249 aa17.43■□□□□ 0.38
TFAP2B-202ENST00000393655 ARHGEF5Q12774 1597 aa17.43■□□□□ 0.38
TFAP2B-202ENST00000393655 GH2P01242 217 aa17.43■□□□□ 0.38
TFAP2B-202ENST00000393655 ADRA2BP18089 450 aa17.43■□□□□ 0.38
TFAP2B-202ENST00000393655 HOXA13P31271 388 aaPredicted RBP17.43■□□□□ 0.38
TFAP2B-202ENST00000393655 COPB2P35606 906 aa17.43■□□□□ 0.38
TFAP2B-202ENST00000393655 C17orf53Q8N3J3 647 aaPredicted RBP17.43■□□□□ 0.38
TFAP2B-202ENST00000393655 PDZD8Q8NEN9 1154 aa17.43■□□□□ 0.38
TFAP2B-202ENST00000393655 GSTA4O15217 222 aa17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 ECE2O60344 883 aa17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 PMLP29590 882 aa17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 DYNLT1P63172 113 aa17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 CFAP61Q8NHU2 1237 aa17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 GFPT2O94808 682 aa17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 CYP21A2P08686 494 aa17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 SLFN14P0C7P3 912 aa17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 TMEM63CQ9P1W3 806 aa17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 LCMT1Q9UIC8 334 aa17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 DAAM1Q9Y4D1 1078 aa17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 ORC6Q9Y5N6 252 aa17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 SCINQ9Y6U3 715 aa17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 UNC13AQ9UPW8 1703 aa17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 MAGI2Q86UL8 1455 aa17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 PLEKHG2Q9H7P9 1386 aa17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 BAG2O95816 211 aa17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 GUCY2DQ02846 1103 aa17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 CTTNQ14247 550 aaKnown RBP17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 NSUN7Q8NE18 718 aaKnown RBP17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 ANTXR1Q9H6X2 564 aa17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 MYO5CQ9NQX4 1742 aa17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 IFNAR1P17181 557 aa17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 BASP1P80723 227 aaKnown RBP17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 ZNF667Q5HYK9 610 aa17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 ZNF18P17022 549 aa17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 WRNIP1Q96S55 665 aa17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 PCDHA5Q9Y5H7 936 aa17.42■□□□□ 0.38
TFAP2B-202ENST00000393655 BNIP3LO60238 219 aa17.41■□□□□ 0.38
TFAP2B-202ENST00000393655 EVI5O60447 810 aa17.41■□□□□ 0.38
TFAP2B-202ENST00000393655 DACT3Q96B18 629 aaPredicted RBP17.41■□□□□ 0.38
TFAP2B-202ENST00000393655 PUS7LQ9H0K6 701 aaKnown RBP17.41■□□□□ 0.38
TFAP2B-202ENST00000393655 KIAA1586Q9HCI6 787 aa17.41■□□□□ 0.38
TFAP2B-202ENST00000393655 ZHX2Q9Y6X8 837 aa17.41■□□□□ 0.38
TFAP2B-202ENST00000393655 MTMR1Q13613 665 aa17.41■□□□□ 0.38
TFAP2B-202ENST00000393655 KLC3Q6P597 504 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms