RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 SEC23AQ15436 765 aa11.15□□□□□ -0.62
C9orf85-202ENST00000377027 TCTN1Q2MV58 587 aa11.15□□□□□ -0.62
C9orf85-202ENST00000377027 GPATCH4Q5T3I0 446 aaKnown RBP11.15□□□□□ -0.62
C9orf85-202ENST00000377027 RGS22Q8NE09 1264 aa11.15□□□□□ -0.62
C9orf85-202ENST00000377027 ADAM32Q8TC27 787 aa11.15□□□□□ -0.62
C9orf85-202ENST00000377027 KAT2BQ92831 832 aa11.15□□□□□ -0.62
C9orf85-202ENST00000377027 ZSCAN10Q96SZ4 725 aaPredicted RBP11.15□□□□□ -0.62
C9orf85-202ENST00000377027 MTG1Q9BT17 334 aaPredicted RBP11.15□□□□□ -0.62
C9orf85-202ENST00000377027 RNF41Q9H4P4 317 aaPredicted RBP11.15□□□□□ -0.62
C9orf85-202ENST00000377027 SENP2Q9HC62 589 aa11.15□□□□□ -0.62
C9orf85-202ENST00000377027 BDP1A6H8Y1 2624 aa11.15□□□□□ -0.62
C9orf85-202ENST00000377027 ZEB2O60315 1214 aa11.14□□□□□ -0.63
C9orf85-202ENST00000377027 TXNP10599 105 aaKnown RBP11.14□□□□□ -0.63
C9orf85-202ENST00000377027 CPT1AP50416 773 aa11.14□□□□□ -0.63
C9orf85-202ENST00000377027 COL9A3Q14050 684 aaPredicted RBP11.14□□□□□ -0.63
C9orf85-202ENST00000377027 ARID5BQ14865 1188 aa11.14□□□□□ -0.63
C9orf85-202ENST00000377027 LY6KQ17RY6 165 aa11.14□□□□□ -0.63
C9orf85-202ENST00000377027 SPRED2Q7Z698 418 aa11.14□□□□□ -0.63
C9orf85-202ENST00000377027 SCFD2Q8WU76 684 aa11.14□□□□□ -0.63
C9orf85-202ENST00000377027 DHX38Q92620 1227 aaKnown RBP11.14□□□□□ -0.63
C9orf85-202ENST00000377027 MTMR8Q96EF0 704 aa11.14□□□□□ -0.63
C9orf85-202ENST00000377027 SEZ6LQ9BYH1 1024 aa11.14□□□□□ -0.63
C9orf85-202ENST00000377027 RWDD1Q9H446 243 aaPredicted RBP11.14□□□□□ -0.63
C9orf85-202ENST00000377027 GDPD2Q9HCC8 539 aa11.14□□□□□ -0.63
C9orf85-202ENST00000377027 SIP14410 1827 aa11.14□□□□□ -0.63
C9orf85-202ENST00000377027 TCF20Q9UGU0 1960 aaKnown RBP11.14□□□□□ -0.63
C9orf85-202ENST00000377027 PRRC2BQ5JSZ5 2229 aaKnown RBP11.13□□□□□ -0.63
C9orf85-202ENST00000377027 ABCB11O95342 1321 aa11.13□□□□□ -0.63
C9orf85-202ENST00000377027 EPOPA6NHQ4 379 aa11.13□□□□□ -0.63
C9orf85-202ENST00000377027 NKRFO15226 690 aaKnown RBP eCLIP11.13□□□□□ -0.63
C9orf85-202ENST00000377027 MMP3P08254 477 aa11.13□□□□□ -0.63
C9orf85-202ENST00000377027 FBXO45P0C2W1 286 aa11.13□□□□□ -0.63
C9orf85-202ENST00000377027 GHRHRQ02643 423 aa11.13□□□□□ -0.63
C9orf85-202ENST00000377027 AAMPQ13685 434 aa11.13□□□□□ -0.63
C9orf85-202ENST00000377027 DEFB128Q7Z7B8 93 aa11.13□□□□□ -0.63
C9orf85-202ENST00000377027 IL31RAQ8NI17 732 aa11.13□□□□□ -0.63
C9orf85-202ENST00000377027 AFG1LQ8WV93 481 aa11.13□□□□□ -0.63
C9orf85-202ENST00000377027 WNT8BQ93098 351 aa11.13□□□□□ -0.63
C9orf85-202ENST00000377027 DIAPH3Q9NSV4 1193 aa11.13□□□□□ -0.63
C9orf85-202ENST00000377027 MAD2L2Q9UI95 211 aa11.13□□□□□ -0.63
C9orf85-202ENST00000377027 WASF2Q9Y6W5 498 aa11.13□□□□□ -0.63
C9orf85-202ENST00000377027 MICAL3Q7RTP6 2002 aa11.13□□□□□ -0.63
C9orf85-202ENST00000377027 ATG2AQ2TAZ0 1938 aa11.12□□□□□ -0.63
C9orf85-202ENST00000377027 RFXAPO00287 272 aa11.12□□□□□ -0.63
C9orf85-202ENST00000377027 ADH1CP00326 375 aa11.12□□□□□ -0.63
C9orf85-202ENST00000377027 AVPP01185 164 aa11.12□□□□□ -0.63
C9orf85-202ENST00000377027 IQCF3P0C7M6 154 aa11.12□□□□□ -0.63
C9orf85-202ENST00000377027 GRM5P41594 1212 aa11.12□□□□□ -0.63
C9orf85-202ENST00000377027 HSD17B4P51659 736 aa11.12□□□□□ -0.63
C9orf85-202ENST00000377027 MFAP1P55081 439 aaKnown RBP11.12□□□□□ -0.63
C9orf85-202ENST00000377027 PTH1RQ03431 593 aa11.12□□□□□ -0.63
C9orf85-202ENST00000377027 RAB30Q15771 203 aa11.12□□□□□ -0.63
C9orf85-202ENST00000377027 ASPRV1Q53RT3 343 aa11.12□□□□□ -0.63
C9orf85-202ENST00000377027 TTC22Q5TAA0 569 aa11.12□□□□□ -0.63
C9orf85-202ENST00000377027 GDF6Q6KF10 455 aaPredicted RBP11.12□□□□□ -0.63
C9orf85-202ENST00000377027 NFRKBQ6P4R8 1299 aa11.12□□□□□ -0.63
C9orf85-202ENST00000377027 TRAF7Q6Q0C0 670 aa11.12□□□□□ -0.63
C9orf85-202ENST00000377027 SEPT14Q6ZU15 432 aa11.12□□□□□ -0.63
C9orf85-202ENST00000377027 STOX1Q6ZVD7 989 aa11.12□□□□□ -0.63
C9orf85-202ENST00000377027 IQCA1Q86XH1 822 aa11.12□□□□□ -0.63
C9orf85-202ENST00000377027 PPM1EQ8WY54 764 aa11.12□□□□□ -0.63
C9orf85-202ENST00000377027 KAT14Q9H8E8 782 aa11.12□□□□□ -0.63
C9orf85-202ENST00000377027 MAP4K5Q9Y4K4 846 aa11.12□□□□□ -0.63
C9orf85-202ENST00000377027 PALM3A6NDB9 673 aaPredicted RBP11.11□□□□□ -0.63
C9orf85-202ENST00000377027 LCE2BO14633 110 aa11.11□□□□□ -0.63
C9orf85-202ENST00000377027 CYTH3O43739 400 aa11.11□□□□□ -0.63
C9orf85-202ENST00000377027 CYP21A2P08686 494 aa11.11□□□□□ -0.63
C9orf85-202ENST00000377027 EIF2AK2P19525 551 aaKnown RBP11.11□□□□□ -0.63
C9orf85-202ENST00000377027 IMMTQ16891 758 aaKnown RBP11.11□□□□□ -0.63
C9orf85-202ENST00000377027 FAM47CQ5HY64 1035 aa11.11□□□□□ -0.63
C9orf85-202ENST00000377027 TMCO2Q7Z6W1 182 aaPredicted RBP11.11□□□□□ -0.63
C9orf85-202ENST00000377027 FBXO11Q86XK2 927 aa11.11□□□□□ -0.63
C9orf85-202ENST00000377027 HPS1Q92902 700 aa11.11□□□□□ -0.63
C9orf85-202ENST00000377027 RMDN3Q96TC7 470 aa11.11□□□□□ -0.63
C9orf85-202ENST00000377027 BCAS3Q9H6U6 928 aa11.11□□□□□ -0.63
C9orf85-202ENST00000377027 VAT1LQ9HCJ6 419 aa11.11□□□□□ -0.63
C9orf85-202ENST00000377027 PXMP2Q9NR77 195 aa11.11□□□□□ -0.63
C9orf85-202ENST00000377027 DDX41Q9UJV9 622 aaKnown RBP11.11□□□□□ -0.63
C9orf85-202ENST00000377027 PNMA2Q9UL42 364 aa11.11□□□□□ -0.63
C9orf85-202ENST00000377027 SLC4A7Q9Y6M7 1214 aa11.11□□□□□ -0.63
C9orf85-202ENST00000377027 C5orf42Q9H799 3197 aa11.1□□□□□ -0.63
C9orf85-202ENST00000377027 HAS3O00219 553 aa11.1□□□□□ -0.63
C9orf85-202ENST00000377027 CA3P07451 260 aa11.1□□□□□ -0.63
C9orf85-202ENST00000377027 PARP1P09874 1014 aaKnown RBP11.1□□□□□ -0.63
C9orf85-202ENST00000377027 SUPT20HL2P0C7V6 817 aa11.1□□□□□ -0.63
C9orf85-202ENST00000377027 HOXD8P13378 290 aaPredicted RBP11.1□□□□□ -0.63
C9orf85-202ENST00000377027 ATP2A2P16615 1042 aaKnown RBP11.1□□□□□ -0.63
C9orf85-202ENST00000377027 NT5C2P49902 561 aa11.1□□□□□ -0.63
C9orf85-202ENST00000377027 ANTXR2P58335 489 aa11.1□□□□□ -0.63
C9orf85-202ENST00000377027 SP2Q02086 613 aa11.1□□□□□ -0.63
C9orf85-202ENST00000377027 PTPN11Q06124 597 aaPredicted RBP11.1□□□□□ -0.63
C9orf85-202ENST00000377027 NR1H3Q13133 447 aa11.1□□□□□ -0.63
C9orf85-202ENST00000377027 MBTPS1Q14703 1052 aa11.1□□□□□ -0.63
C9orf85-202ENST00000377027 CCDC85BQ15834 202 aaPredicted RBP11.1□□□□□ -0.63
C9orf85-202ENST00000377027 TRIM71Q2Q1W2 868 aaKnown RBP11.1□□□□□ -0.63
C9orf85-202ENST00000377027 KRT40Q6A162 431 aa11.1□□□□□ -0.63
C9orf85-202ENST00000377027 VASH1Q7L8A9 365 aaPredicted RBP11.1□□□□□ -0.63
C9orf85-202ENST00000377027 CHST3Q7LGC8 479 aa11.1□□□□□ -0.63
C9orf85-202ENST00000377027 SESTD1Q86VW0 696 aa11.1□□□□□ -0.63
C9orf85-202ENST00000377027 NSUN6Q8TEA1 469 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms