RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 KCTD10Q9H3F6 313 aa17.68■□□□□ 0.42
CNKSR1-202ENST00000374253 ZNRF3Q9ULT6 936 aa17.68■□□□□ 0.42
CNKSR1-202ENST00000374253 RHOXF2BP0C7M4 288 aa17.67■□□□□ 0.42
CNKSR1-202ENST00000374253 EIF4A3P38919 411 aaKnown RBP17.67■□□□□ 0.42
CNKSR1-202ENST00000374253 ADAM9Q13443 819 aa17.67■□□□□ 0.42
CNKSR1-202ENST00000374253 CACNA2D4Q7Z3S7 1137 aa17.67■□□□□ 0.42
CNKSR1-202ENST00000374253 CAPZA3Q96KX2 299 aa17.67■□□□□ 0.42
CNKSR1-202ENST00000374253 RHOXF2Q9BQY4 288 aa17.67■□□□□ 0.42
CNKSR1-202ENST00000374253 VCPKMTQ9H867 229 aa17.67■□□□□ 0.42
CNKSR1-202ENST00000374253 GCOM1H8Y6P7 765 aaPredicted RBP17.67■□□□□ 0.42
CNKSR1-202ENST00000374253 DDX39AO00148 427 aaKnown RBP17.67■□□□□ 0.42
CNKSR1-202ENST00000374253 IPO7O95373 1038 aaKnown RBP17.67■□□□□ 0.42
CNKSR1-202ENST00000374253 POLR2MP0CAP2 368 aa17.67■□□□□ 0.42
CNKSR1-202ENST00000374253 CAP2P40123 477 aa17.67■□□□□ 0.42
CNKSR1-202ENST00000374253 ARID5AQ03989 594 aa17.67■□□□□ 0.42
CNKSR1-202ENST00000374253 TMCO3Q6UWJ1 677 aa17.67■□□□□ 0.42
CNKSR1-202ENST00000374253 DRC1Q96MC2 740 aa17.67■□□□□ 0.42
CNKSR1-202ENST00000374253 ZNF341Q9BYN7 854 aa17.67■□□□□ 0.42
CNKSR1-202ENST00000374253 DEF6Q9H4E7 631 aa17.67■□□□□ 0.42
CNKSR1-202ENST00000374253 HAUS4Q9H6D7 363 aa17.67■□□□□ 0.42
CNKSR1-202ENST00000374253 INPP5BP32019 993 aa17.66■□□□□ 0.42
CNKSR1-202ENST00000374253 CIITAP33076 1130 aa17.66■□□□□ 0.42
CNKSR1-202ENST00000374253 KRT83P78385 493 aa17.66■□□□□ 0.42
CNKSR1-202ENST00000374253 LRCH2Q5VUJ6 765 aa17.66■□□□□ 0.42
CNKSR1-202ENST00000374253 ANKRD13CQ8N6S4 541 aa17.66■□□□□ 0.42
CNKSR1-202ENST00000374253 SYT2Q8N9I0 419 aaPredicted RBP17.66■□□□□ 0.42
CNKSR1-202ENST00000374253 NEK11Q8NG66 645 aa17.66■□□□□ 0.42
CNKSR1-202ENST00000374253 DYDC2Q96IM9 177 aa17.66■□□□□ 0.42
CNKSR1-202ENST00000374253 FAM20AQ96MK3 541 aa17.66■□□□□ 0.42
CNKSR1-202ENST00000374253 HOMER2Q9NSB8 354 aa17.66■□□□□ 0.42
CNKSR1-202ENST00000374253 ARGLU1Q9NWB6 273 aaPredicted RBP17.66■□□□□ 0.42
CNKSR1-202ENST00000374253 FHOD1Q9Y613 1164 aa17.66■□□□□ 0.42
CNKSR1-202ENST00000374253 A0A1W2PQJ5 194 aa17.66■□□□□ 0.42
CNKSR1-202ENST00000374253 TBX3O15119 743 aa17.66■□□□□ 0.42
CNKSR1-202ENST00000374253 ARP10275 920 aa17.66■□□□□ 0.42
CNKSR1-202ENST00000374253 NR2F2P24468 414 aa17.66■□□□□ 0.42
CNKSR1-202ENST00000374253 HOXD13P35453 343 aa17.66■□□□□ 0.42
CNKSR1-202ENST00000374253 TRMT1LQ7Z2T5 733 aaKnown RBP17.66■□□□□ 0.42
CNKSR1-202ENST00000374253 LDHDQ86WU2 507 aa17.66■□□□□ 0.42
CNKSR1-202ENST00000374253 KSR1Q8IVT5 923 aa17.66■□□□□ 0.42
CNKSR1-202ENST00000374253 CPXCR1Q8N123 301 aa17.66■□□□□ 0.42
CNKSR1-202ENST00000374253 LSM14BQ9BX40 385 aaKnown RBP17.66■□□□□ 0.42
CNKSR1-202ENST00000374253 MYO6Q9UM54 1294 aa17.66■□□□□ 0.42
CNKSR1-202ENST00000374253 PLAGL2Q9UPG8 496 aa17.66■□□□□ 0.42
CNKSR1-202ENST00000374253 ASTN2O75129 1339 aaPredicted RBP17.66■□□□□ 0.42
CNKSR1-202ENST00000374253 ABCB11O95342 1321 aa17.66■□□□□ 0.42
CNKSR1-202ENST00000374253 EIF3CLB5ME19 914 aaKnown RBP17.65■□□□□ 0.42
CNKSR1-202ENST00000374253 FIGNQ5HY92 759 aa17.65■□□□□ 0.42
CNKSR1-202ENST00000374253 GPR161Q8N6U8 529 aaKnown RBP17.65■□□□□ 0.42
CNKSR1-202ENST00000374253 BAP1Q92560 729 aa17.65■□□□□ 0.42
CNKSR1-202ENST00000374253 EIF3CQ99613 913 aaKnown RBP17.65■□□□□ 0.42
CNKSR1-202ENST00000374253 RANBP17Q9H2T7 1088 aaKnown RBP17.65■□□□□ 0.42
CNKSR1-202ENST00000374253 MLXIPQ9HAP2 919 aa17.65■□□□□ 0.42
CNKSR1-202ENST00000374253 RABGAP1Q9Y3P9 1069 aa17.65■□□□□ 0.42
CNKSR1-202ENST00000374253 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.65■□□□□ 0.42
CNKSR1-202ENST00000374253 PIK3CDO00329 1044 aa17.65■□□□□ 0.42
CNKSR1-202ENST00000374253 CLIC2O15247 247 aa17.65■□□□□ 0.42
CNKSR1-202ENST00000374253 AKR1B10O60218 316 aa17.65■□□□□ 0.42
CNKSR1-202ENST00000374253 PNMA6AP0CW24 399 aaPredicted RBP17.65■□□□□ 0.42
CNKSR1-202ENST00000374253 KIF11P52732 1056 aa17.65■□□□□ 0.42
CNKSR1-202ENST00000374253 POLR2FP61218 127 aaKnown RBP17.65■□□□□ 0.42
CNKSR1-202ENST00000374253 AMPD2Q01433 879 aa17.65■□□□□ 0.42
CNKSR1-202ENST00000374253 RASA3Q14644 834 aa17.65■□□□□ 0.42
CNKSR1-202ENST00000374253 OTOP1Q7RTM1 612 aa17.65■□□□□ 0.42
CNKSR1-202ENST00000374253 NOA1Q8NC60 698 aaKnown RBP17.65■□□□□ 0.42
CNKSR1-202ENST00000374253 CHURC1Q8WUH1 139 aa17.65■□□□□ 0.42
CNKSR1-202ENST00000374253 UBE2Q2Q8WVN8 375 aa17.65■□□□□ 0.42
CNKSR1-202ENST00000374253 FRMD3A2A2Y4 597 aa17.64■□□□□ 0.41
CNKSR1-202ENST00000374253 KRT86O43790 486 aa17.64■□□□□ 0.41
CNKSR1-202ENST00000374253 GCNT3O95395 438 aa17.64■□□□□ 0.41
CNKSR1-202ENST00000374253 GFPT1Q06210 699 aaPredicted RBP17.64■□□□□ 0.41
CNKSR1-202ENST00000374253 SPA17Q15506 151 aa17.64■□□□□ 0.41
CNKSR1-202ENST00000374253 TDRD12Q587J7 1177 aaKnown RBP17.64■□□□□ 0.41
CNKSR1-202ENST00000374253 RABGGTAQ92696 567 aa17.64■□□□□ 0.41
CNKSR1-202ENST00000374253 PNKPQ96T60 521 aa17.64■□□□□ 0.41
CNKSR1-202ENST00000374253 ANKZF1Q9H8Y5 726 aa17.64■□□□□ 0.41
CNKSR1-202ENST00000374253 WRAP73Q9P2S5 460 aaPredicted RBP17.64■□□□□ 0.41
CNKSR1-202ENST00000374253 COL2A1P02458 1487 aaPredicted RBP17.64■□□□□ 0.41
CNKSR1-202ENST00000374253 ZNF185O15231 689 aa17.64■□□□□ 0.41
CNKSR1-202ENST00000374253 NOL4O94818 638 aa17.64■□□□□ 0.41
CNKSR1-202ENST00000374253 SLITRK3O94933 977 aa17.64■□□□□ 0.41
CNKSR1-202ENST00000374253 CYP3A4P08684 503 aa17.64■□□□□ 0.41
CNKSR1-202ENST00000374253 CCDC170Q8IYT3 715 aa17.64■□□□□ 0.41
CNKSR1-202ENST00000374253 KRT222Q8N1A0 295 aa17.64■□□□□ 0.41
CNKSR1-202ENST00000374253 CEP112Q8N8E3 955 aa17.64■□□□□ 0.41
CNKSR1-202ENST00000374253 IFIH1Q9BYX4 1025 aaKnown RBP17.64■□□□□ 0.41
CNKSR1-202ENST00000374253 MYOZ2Q9NPC6 264 aa17.64■□□□□ 0.41
CNKSR1-202ENST00000374253 MYO1AQ9UBC5 1043 aa17.64■□□□□ 0.41
CNKSR1-202ENST00000374253 FZD1Q9UP38 647 aa17.64■□□□□ 0.41
CNKSR1-202ENST00000374253 NFIBO00712 420 aa17.63■□□□□ 0.41
CNKSR1-202ENST00000374253 GAS7O60861 476 aa17.63■□□□□ 0.41
CNKSR1-202ENST00000374253 SASH3O75995 380 aa17.63■□□□□ 0.41
CNKSR1-202ENST00000374253 ACTN1P12814 892 aa17.63■□□□□ 0.41
CNKSR1-202ENST00000374253 TRIM59Q8IWR1 403 aa17.63■□□□□ 0.41
CNKSR1-202ENST00000374253 PITPNM2Q9BZ72 1349 aa17.63■□□□□ 0.41
CNKSR1-202ENST00000374253 PSME4Q14997 1843 aa17.63■□□□□ 0.41
CNKSR1-202ENST00000374253 TBCAO75347 108 aaKnown RBP17.63■□□□□ 0.41
CNKSR1-202ENST00000374253 ZRANB2O95218 330 aaKnown RBP eCLIP17.63■□□□□ 0.41
CNKSR1-202ENST00000374253 NMT1P30419 496 aaKnown RBP17.63■□□□□ 0.41
CNKSR1-202ENST00000374253 EPS15P42566 896 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms