RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 PIK3CDO00329 1044 aa20.72■□□□□ 0.91
USP49-202ENST00000373010 CYP3A4P08684 503 aa20.72■□□□□ 0.91
USP49-202ENST00000373010 CTAGE8P0CG41 777 aa20.72■□□□□ 0.91
USP49-202ENST00000373010 PLA2G4AP47712 749 aa20.72■□□□□ 0.91
USP49-202ENST00000373010 VAV2P52735 878 aa20.72■□□□□ 0.91
USP49-202ENST00000373010 SPA17Q15506 151 aa20.72■□□□□ 0.91
USP49-202ENST00000373010 SPDYE2Q495Y8 402 aa20.72■□□□□ 0.91
USP49-202ENST00000373010 CTAGE6Q86UF2 777 aa20.72■□□□□ 0.91
USP49-202ENST00000373010 CTAGE4Q8IX94 777 aa20.72■□□□□ 0.91
USP49-202ENST00000373010 GOPCQ9HD26 462 aa20.72■□□□□ 0.91
USP49-202ENST00000373010 SYNPO2Q9UMS6 1093 aa20.72■□□□□ 0.91
USP49-202ENST00000373010 TBC1D8O95759 1140 aa20.71■□□□□ 0.91
USP49-202ENST00000373010 UBXN2AP68543 259 aa20.71■□□□□ 0.91
USP49-202ENST00000373010 SFR1Q86XK3 245 aa20.71■□□□□ 0.91
USP49-202ENST00000373010 OGFOD1Q8N543 542 aa20.71■□□□□ 0.91
USP49-202ENST00000373010 PNKPQ96T60 521 aa20.71■□□□□ 0.91
USP49-202ENST00000373010 BCAS3Q9H6U6 928 aa20.71■□□□□ 0.91
USP49-202ENST00000373010 RGL1Q9NZL6 768 aa20.71■□□□□ 0.91
USP49-202ENST00000373010 IGLV3-22A0A075B6J6 115 aa20.7■□□□□ 0.91
USP49-202ENST00000373010 SRGAP2O75044 1071 aa20.7■□□□□ 0.91
USP49-202ENST00000373010 SASH3O75995 380 aa20.7■□□□□ 0.91
USP49-202ENST00000373010 RHOXF2BP0C7M4 288 aa20.7■□□□□ 0.91
USP49-202ENST00000373010 KIF11P52732 1056 aa20.7■□□□□ 0.91
USP49-202ENST00000373010 PDXDC1Q6P996 788 aa20.7■□□□□ 0.91
USP49-202ENST00000373010 RTKN2Q8IZC4 609 aa20.7■□□□□ 0.91
USP49-202ENST00000373010 EIF2AK1Q9BQI3 630 aaKnown RBP20.7■□□□□ 0.91
USP49-202ENST00000373010 RHOXF2Q9BQY4 288 aa20.7■□□□□ 0.91
USP49-202ENST00000373010 CRACR2AQ9BSW2 395 aa20.7■□□□□ 0.91
USP49-202ENST00000373010 WDR18Q9BV38 432 aa20.7■□□□□ 0.91
USP49-202ENST00000373010 NLRC4Q9NPP4 1024 aa20.7■□□□□ 0.91
USP49-202ENST00000373010 APBA1Q02410 837 aa20.7■□□□□ 0.9
USP49-202ENST00000373010 ADAM9Q13443 819 aa20.7■□□□□ 0.9
USP49-202ENST00000373010 CACNA2D4Q7Z3S7 1137 aa20.7■□□□□ 0.9
USP49-202ENST00000373010 TRIM59Q8IWR1 403 aa20.7■□□□□ 0.9
USP49-202ENST00000373010 NOA1Q8NC60 698 aaKnown RBP20.7■□□□□ 0.9
USP49-202ENST00000373010 ZFP91Q96JP5 570 aaPredicted RBP20.7■□□□□ 0.9
USP49-202ENST00000373010 BHMT2Q9H2M3 363 aa20.7■□□□□ 0.9
USP49-202ENST00000373010 ARFGAP3Q9NP61 516 aa20.7■□□□□ 0.9
USP49-202ENST00000373010 RSPH10B2B2RC85 870 aa20.69■□□□□ 0.9
USP49-202ENST00000373010 RSPH10BP0C881 870 aa20.69■□□□□ 0.9
USP49-202ENST00000373010 KIF5AQ12840 1032 aa20.69■□□□□ 0.9
USP49-202ENST00000373010 AEBP2Q6ZN18 517 aaPredicted RBP20.69■□□□□ 0.9
USP49-202ENST00000373010 EHBP1Q8NDI1 1231 aa20.69■□□□□ 0.9
USP49-202ENST00000373010 PURBQ96QR8 312 aaKnown RBP20.69■□□□□ 0.9
USP49-202ENST00000373010 PSMD1Q99460 953 aa20.69■□□□□ 0.9
USP49-202ENST00000373010 RUSC1Q9BVN2 902 aa20.69■□□□□ 0.9
USP49-202ENST00000373010 IFIH1Q9BYX4 1025 aaKnown RBP20.69■□□□□ 0.9
USP49-202ENST00000373010 GLIS2Q9BZE0 524 aaPredicted RBP20.69■□□□□ 0.9
USP49-202ENST00000373010 DEF6Q9H4E7 631 aa20.69■□□□□ 0.9
USP49-202ENST00000373010 PCDHA13Q9Y5I0 950 aa20.69■□□□□ 0.9
USP49-202ENST00000373010 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.69■□□□□ 0.9
USP49-202ENST00000373010 NOL4O94818 638 aa20.69■□□□□ 0.9
USP49-202ENST00000373010 KIF20AO95235 890 aa20.69■□□□□ 0.9
USP49-202ENST00000373010 DMTNQ08495 405 aa20.69■□□□□ 0.9
USP49-202ENST00000373010 LSM14BQ9BX40 385 aaKnown RBP20.69■□□□□ 0.9
USP49-202ENST00000373010 AKR1B10O60218 316 aa20.68■□□□□ 0.9
USP49-202ENST00000373010 GNA14O95837 355 aa20.68■□□□□ 0.9
USP49-202ENST00000373010 MYBP10242 640 aa20.68■□□□□ 0.9
USP49-202ENST00000373010 DPEP1P16444 411 aa20.68■□□□□ 0.9
USP49-202ENST00000373010 HOXD13P35453 343 aa20.68■□□□□ 0.9
USP49-202ENST00000373010 CTTNQ14247 550 aaKnown RBP20.68■□□□□ 0.9
USP49-202ENST00000373010 PAPD7Q5XG87 772 aaKnown RBP20.68■□□□□ 0.9
USP49-202ENST00000373010 MSANTD4Q8NCY6 345 aa20.68■□□□□ 0.9
USP49-202ENST00000373010 ZMYND15Q9H091 742 aa20.68■□□□□ 0.9
USP49-202ENST00000373010 FBXO28Q9NVF7 368 aa20.68■□□□□ 0.9
USP49-202ENST00000373010 SAR1BQ9Y6B6 198 aa20.68■□□□□ 0.9
USP49-202ENST00000373010 GCOM1H8Y6P7 765 aaPredicted RBP20.68■□□□□ 0.9
USP49-202ENST00000373010 PRPF6O94906 941 aaKnown RBP20.68■□□□□ 0.9
USP49-202ENST00000373010 POLR2MP0CAP2 368 aa20.68■□□□□ 0.9
USP49-202ENST00000373010 KCNA3P22001 575 aa20.68■□□□□ 0.9
USP49-202ENST00000373010 MARSP56192 900 aaKnown RBP20.68■□□□□ 0.9
USP49-202ENST00000373010 ZC3H3Q8IXZ2 948 aaKnown RBP20.68■□□□□ 0.9
USP49-202ENST00000373010 SECISBP2LQ93073 1101 aaKnown RBP20.68■□□□□ 0.9
USP49-202ENST00000373010 POLR3CQ9BUI4 534 aaPredicted RBP20.68■□□□□ 0.9
USP49-202ENST00000373010 RANBP17Q9H2T7 1088 aaKnown RBP20.68■□□□□ 0.9
USP49-202ENST00000373010 VCPKMTQ9H867 229 aa20.68■□□□□ 0.9
USP49-202ENST00000373010 SCAF8Q9UPN6 1271 aaKnown RBP20.68■□□□□ 0.9
USP49-202ENST00000373010 CHMP2AO43633 222 aa20.67■□□□□ 0.9
USP49-202ENST00000373010 NR2F2P24468 414 aa20.67■□□□□ 0.9
USP49-202ENST00000373010 PIGOQ8TEQ8 1089 aa20.67■□□□□ 0.9
USP49-202ENST00000373010 CAPZA3Q96KX2 299 aa20.67■□□□□ 0.9
USP49-202ENST00000373010 MLXIPQ9HAP2 919 aa20.67■□□□□ 0.9
USP49-202ENST00000373010 RABGAP1Q9Y3P9 1069 aa20.67■□□□□ 0.9
USP49-202ENST00000373010 CCDC151A5D8V7 595 aa20.67■□□□□ 0.9
USP49-202ENST00000373010 CETN3O15182 167 aa20.67■□□□□ 0.9
USP49-202ENST00000373010 GABPB1Q06547 395 aaPredicted RBP20.67■□□□□ 0.9
USP49-202ENST00000373010 BRD3Q15059 726 aa20.67■□□□□ 0.9
USP49-202ENST00000373010 EDRF1Q3B7T1 1238 aa20.67■□□□□ 0.9
USP49-202ENST00000373010 EPM2AIP1Q7L775 607 aaPredicted RBP20.67■□□□□ 0.9
USP49-202ENST00000373010 CHURC1Q8WUH1 139 aa20.67■□□□□ 0.9
USP49-202ENST00000373010 MMS19Q96T76 1030 aa20.67■□□□□ 0.9
USP49-202ENST00000373010 EDEM3Q9BZQ6 932 aa20.67■□□□□ 0.9
USP49-202ENST00000373010 CEP72Q9P209 647 aa20.67■□□□□ 0.9
USP49-202ENST00000373010 STK24Q9Y6E0 443 aa20.67■□□□□ 0.9
USP49-202ENST00000373010 LCA5LO95447 670 aa20.66■□□□□ 0.9
USP49-202ENST00000373010 POLR2FP61218 127 aaKnown RBP20.66■□□□□ 0.9
USP49-202ENST00000373010 LONRF2Q1L5Z9 754 aa20.66■□□□□ 0.9
USP49-202ENST00000373010 HGSNATQ68CP4 663 aa20.66■□□□□ 0.9
USP49-202ENST00000373010 TSGA10Q9BZW7 698 aa20.66■□□□□ 0.9
USP49-202ENST00000373010 RAB21Q9UL25 225 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms