RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 ST13P5Q8NFI4 369 aaPredicted RBP16.37■□□□□ 0.21
COL5A1-201ENST00000371817 DNAJC9Q8WXX5 260 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 APPBP2Q92624 585 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 ATP6V1G3Q96LB4 118 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 DLGAP3O95886 979 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 CAV1Q03135 178 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 HIF1AQ16665 826 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 COPS6Q7L5N1 327 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 FAM178BQ8IXR5 827 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 LINS1Q8NG48 757 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 TRIM63Q969Q1 353 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 SNUPNO95149 360 aaKnown RBP16.37■□□□□ 0.21
COL5A1-201ENST00000371817 SERPING1P05155 500 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 MYL7Q01449 175 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 STX3Q13277 289 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 ADCK5Q3MIX3 580 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 CHMP2BQ9UQN3 213 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 OCM2P0CE71 109 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 OCMP0CE72 109 aaPredicted RBP16.37■□□□□ 0.21
COL5A1-201ENST00000371817 WASHC5Q12768 1159 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 RUBCNQ92622 972 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 TROQ12816 1431 aaPredicted RBP16.37■□□□□ 0.21
COL5A1-201ENST00000371817 GRK2P25098 689 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 DARS2Q6PI48 645 aaKnown RBP16.37■□□□□ 0.21
COL5A1-201ENST00000371817 RFX8Q6ZV50 586 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 KCTD6Q8NC69 237 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 PHF21AQ96BD5 680 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 ZNF839A8K0R7 811 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 RSPH10B2B2RC85 870 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 TBC1D4O60343 1298 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 RSPH10BP0C881 870 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 CTCFP49711 727 aaPredicted RBP16.37■□□□□ 0.21
COL5A1-201ENST00000371817 MECOMQ03112 1051 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 DMP1Q13316 513 aaPredicted RBP16.37■□□□□ 0.21
COL5A1-201ENST00000371817 CDH24Q86UP0 819 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 TAGAPQ8N103 731 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 BEGAINQ9BUH8 593 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 PDP2Q9P2J9 529 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 STK17AQ9UEE5 414 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 ZMYND8Q9ULU4 1186 aaPredicted RBP16.37■□□□□ 0.21
COL5A1-201ENST00000371817 DDX39AO00148 427 aaKnown RBP16.37■□□□□ 0.21
COL5A1-201ENST00000371817 HNRNPRO43390 633 aaKnown RBP16.37■□□□□ 0.21
COL5A1-201ENST00000371817 PFKFB2O60825 505 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 RABGAP1LQ5R372 815 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 SPDYE1Q8NFV5 336 aaPredicted RBP16.37■□□□□ 0.21
COL5A1-201ENST00000371817 DHX38Q92620 1227 aaKnown RBP16.37■□□□□ 0.21
COL5A1-201ENST00000371817 MRPL47Q9HD33 250 aaKnown RBP16.37■□□□□ 0.21
COL5A1-201ENST00000371817 MTMR6Q9Y217 621 aa16.37■□□□□ 0.21
COL5A1-201ENST00000371817 KCNA1Q09470 495 aa16.36■□□□□ 0.21
COL5A1-201ENST00000371817 FOXD4Q12950 439 aaPredicted RBP16.36■□□□□ 0.21
COL5A1-201ENST00000371817 INAQ16352 499 aa16.36■□□□□ 0.21
COL5A1-201ENST00000371817 DPCR1Q3MIW9 517 aa16.36■□□□□ 0.21
COL5A1-201ENST00000371817 PBXIP1Q96AQ6 731 aa16.36■□□□□ 0.21
COL5A1-201ENST00000371817 FAM210AQ96ND0 272 aa16.36■□□□□ 0.21
COL5A1-201ENST00000371817 DIS3Q9Y2L1 958 aaKnown RBP16.36■□□□□ 0.21
COL5A1-201ENST00000371817 VSTM4Q8IW00 320 aa16.36■□□□□ 0.21
COL5A1-201ENST00000371817 C19orf44Q9H6X5 657 aa16.36■□□□□ 0.21
COL5A1-201ENST00000371817 CYP2C19P33261 490 aa16.36■□□□□ 0.21
COL5A1-201ENST00000371817 DHTKD1Q96HY7 919 aaPredicted RBP16.36■□□□□ 0.21
COL5A1-201ENST00000371817 ZFYVE19Q96K21 471 aa16.36■□□□□ 0.21
COL5A1-201ENST00000371817 MED10Q9BTT4 135 aa16.36■□□□□ 0.21
COL5A1-201ENST00000371817 DONSONQ9NYP3 566 aa16.36■□□□□ 0.21
COL5A1-201ENST00000371817 CCDC142Q17RM4 750 aa16.36■□□□□ 0.21
COL5A1-201ENST00000371817 FAM81BQ96LP2 452 aa16.36■□□□□ 0.21
COL5A1-201ENST00000371817 PMLP29590 882 aa16.36■□□□□ 0.21
COL5A1-201ENST00000371817 PKP1Q13835 747 aa16.36■□□□□ 0.21
COL5A1-201ENST00000371817 HABP4Q5JVS0 413 aaKnown RBP16.36■□□□□ 0.21
COL5A1-201ENST00000371817 SLFN12Q8IYM2 578 aa16.36■□□□□ 0.21
COL5A1-201ENST00000371817 SLC39A2Q9NP94 309 aa16.36■□□□□ 0.21
COL5A1-201ENST00000371817 CFAP69A5D8W1 941 aa16.36■□□□□ 0.21
COL5A1-201ENST00000371817 DLATP10515 647 aaKnown RBP16.36■□□□□ 0.21
COL5A1-201ENST00000371817 SLC9A1P19634 815 aa16.36■□□□□ 0.21
COL5A1-201ENST00000371817 PUM3Q15397 648 aaKnown RBP16.36■□□□□ 0.21
COL5A1-201ENST00000371817 PCDHA12Q9UN75 941 aa16.36■□□□□ 0.21
COL5A1-201ENST00000371817 TSPAN9O75954 239 aa16.35■□□□□ 0.21
COL5A1-201ENST00000371817 SF3B3Q15393 1217 aaKnown RBP16.35■□□□□ 0.21
COL5A1-201ENST00000371817 IFNL2Q8IZJ0 200 aa16.35■□□□□ 0.21
COL5A1-201ENST00000371817 NSMCE4AQ9NXX6 385 aa16.35■□□□□ 0.21
COL5A1-201ENST00000371817 MPP6Q9NZW5 540 aa16.35■□□□□ 0.21
COL5A1-201ENST00000371817 TMA7Q9Y2S6 64 aaKnown RBP16.35■□□□□ 0.21
COL5A1-201ENST00000371817 KDRP35968 1356 aa16.35■□□□□ 0.21
COL5A1-201ENST00000371817 KIF14Q15058 1648 aa16.35■□□□□ 0.21
COL5A1-201ENST00000371817 A0A1W2PQ27 194 aa16.35■□□□□ 0.21
COL5A1-201ENST00000371817 A0A1W2PQ64 194 aa16.35■□□□□ 0.21
COL5A1-201ENST00000371817 A0A1W2PQD8 194 aa16.35■□□□□ 0.21
COL5A1-201ENST00000371817 TECP42680 631 aa16.35■□□□□ 0.21
COL5A1-201ENST00000371817 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.35■□□□□ 0.21
COL5A1-201ENST00000371817 ARHGEF10LQ9HCE6 1279 aa16.35■□□□□ 0.21
COL5A1-201ENST00000371817 KPNA7A9QM74 516 aa16.35■□□□□ 0.21
COL5A1-201ENST00000371817 ARFIP2P53365 341 aa16.35■□□□□ 0.21
COL5A1-201ENST00000371817 COPS2P61201 443 aa16.35■□□□□ 0.21
COL5A1-201ENST00000371817 ZCCHC17Q9NP64 241 aaKnown RBP16.35■□□□□ 0.21
COL5A1-201ENST00000371817 DISP3Q9P2K9 1392 aa16.35■□□□□ 0.21
COL5A1-201ENST00000371817 B4GALNT2Q8NHY0 566 aa16.35■□□□□ 0.21
COL5A1-201ENST00000371817 LSG1Q9H089 658 aaKnown RBP16.35■□□□□ 0.21
COL5A1-201ENST00000371817 HESX1Q9UBX0 185 aa16.35■□□□□ 0.21
COL5A1-201ENST00000371817 KLHL31Q9H511 634 aa16.35■□□□□ 0.21
COL5A1-201ENST00000371817 ZSCAN9O15535 394 aaPredicted RBP16.35■□□□□ 0.21
COL5A1-201ENST00000371817 XPOTO43592 962 aaKnown RBP16.35■□□□□ 0.21
COL5A1-201ENST00000371817 MFAP3P55082 362 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms