RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 STXBP5LQ9Y2K9 1186 aa12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 MINDY4BA8MYZ0 360 aa12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 TTI1O43156 1089 aa12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 CLTAP09496 248 aa12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 GBP2P32456 591 aaPredicted RBP12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 SPDYE1Q8NFV5 336 aaPredicted RBP12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 ACTRT1Q8TDG2 376 aa12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 PSMD1Q99460 953 aa12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 NLRC4Q9NPP4 1024 aa12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 PHLPP1O60346 1717 aa12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 GOLGB1Q14789 3259 aaKnown RBP12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 CYTH3O43739 400 aa12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 DIAPH2O60879 1101 aa12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 PPFIA2O75334 1257 aa12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 PEX19P40855 299 aa12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 MGAT5Q09328 741 aa12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 ZCWPW2Q504Y3 356 aa12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 CCDC178Q5BJE1 867 aa12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 FAM133BQ5BKY9 247 aaKnown RBP12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 IFIT1BQ5T764 474 aaKnown RBP12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 ARMC2Q8NEN0 867 aa12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 CCDC26Q8TAB7 109 aa12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 ZMYND8Q9ULU4 1186 aaPredicted RBP12.8□□□□□ -0.36
SMARCA1-201ENST00000371121 ERICH2A1L162 156 aa12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 EIF4E1BA6NMX2 242 aaKnown RBP12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 ASAP2O43150 1006 aa12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 BUB1BO60566 1050 aaPredicted RBP12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 MYL1P05976 194 aa12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 PPP2R5BQ15173 497 aa12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 ZKSCAN8Q15776 578 aaPredicted RBP12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 SLC18A3Q16572 532 aa12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 METTL13Q8N6R0 699 aa12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 TBC1D5Q92609 795 aa12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 CES2O00748 559 aa12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 UBOX5O94941 541 aa12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 GCKP35557 465 aa12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 CCNG1P51959 295 aa12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 MAP3K12Q12852 859 aa12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 CUL1Q13616 776 aa12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 BLMHQ13867 455 aa12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 CGB2Q6NT52 195 aa12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 P3H4Q92791 437 aa12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 DDX17Q92841 729 aaKnown RBP12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 PYM1Q9BRP8 204 aaKnown RBP12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 NKX1-2Q9UD57 310 aaPredicted RBP12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 PNMA3Q9UL41 463 aa12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 MYMKA6NI61 221 aa12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 GSTA1P08263 222 aa12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 DYNLL1P63167 89 aaKnown RBP12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 INF2Q27J81 1249 aa12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 FAM83BQ5T0W9 1011 aa12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 LMOD2Q6P5Q4 547 aa12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 UBLCP1Q8WVY7 318 aaPredicted RBP12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 SPAG5Q96R06 1193 aa12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 PIDD1Q9HB75 910 aa12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 ADAM22Q9P0K1 906 aa12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 AJAP1Q9UKB5 411 aaPredicted RBP12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 NOC2LQ9Y3T9 749 aaKnown RBP12.79□□□□□ -0.36
SMARCA1-201ENST00000371121 DCCP43146 1447 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 KCNK3O14649 394 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 KIF4AO95239 1232 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 XBP1P17861 261 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 RAB27AP51159 221 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 NLRP5P59047 1200 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 PUM3Q15397 648 aaKnown RBP12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 MAN2A1Q16706 1144 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 BLIDQ8IZY5 108 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 RASGEF1CQ8N431 466 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 ERVK-5Q9HDB9 667 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 CNNM1Q9NRU3 951 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 ADAMTS1Q9UHI8 967 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 CORO1CQ9ULV4 474 aaPredicted RBP12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 RPTORQ8N122 1335 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 CTNND1O60716 968 aaKnown RBP12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 GM2AP17900 193 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 USP11P51784 963 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 MSL1Q68DK7 614 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 ARFGAP2Q8N6H7 521 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 TRIM51Q9BSJ1 452 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 CCDC134Q9H6E4 229 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 RBM28Q9NW13 759 aaKnown RBP12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 MAST2Q6P0Q8 1798 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 MYBL1P10243 752 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 NQO1P15559 274 aaKnown RBP12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 COPB2P35606 906 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 KLRC3Q07444 240 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 HLTFQ14527 1009 aaKnown RBP eCLIP12.78□□□□□ -0.361e-13■□□□□ 9.1
SMARCA1-201ENST00000371121 ITIH4Q14624 930 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 ZDHHC24Q6UX98 284 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 DTHD1Q6ZMT9 781 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 TRPM8Q7Z2W7 1104 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 KCNK18Q7Z418 384 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 IRF2BP2Q7Z5L9 587 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 CPLX4Q7Z7G2 160 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 KIF2BQ8N4N8 673 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 ESR2Q92731 530 aa12.78□□□□□ -0.36
SMARCA1-201ENST00000371121 PRMT1Q99873 361 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms