RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 PPFIA1Q13136 1202 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 AP3B2Q13367 1082 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 CEP85LQ5SZL2 805 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 FMNL3Q8IVF7 1028 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 UBL4BQ8N7F7 174 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 UHMK1Q8TAS1 419 aaKnown RBP9.25□□□□□ -0.93
PTPRK-206ENST00000368215 KIFAP3Q92845 792 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 HOOK2Q96ED9 719 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 NACC1Q96RE7 527 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 C7orf25Q9BPX7 421 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 PACSIN2Q9UNF0 486 aaPredicted RBP9.25□□□□□ -0.93
PTPRK-206ENST00000368215 CYTH3O43739 400 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 RNF40O75150 1001 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 SRGNP10124 158 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 STRN3Q13033 797 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 ALKBH5Q6P6C2 394 aaKnown RBP9.25□□□□□ -0.93
PTPRK-206ENST00000368215 DYDC2Q96IM9 177 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 SH2D3AQ9BRG2 576 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 ZNF341Q9BYN7 854 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 MORC2Q9Y6X9 1032 aaPredicted RBP9.25□□□□□ -0.93
PTPRK-206ENST00000368215 PDS5AQ29RF7 1337 aaKnown RBP9.25□□□□□ -0.93
PTPRK-206ENST00000368215 GOLGA8IPA6NC78 632 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 GOLGA8JA6NMD2 632 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 PMS1P54277 932 aaKnown RBP9.25□□□□□ -0.93
PTPRK-206ENST00000368215 VSNL1P62760 191 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 CPLX4Q7Z7G2 160 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 HOOK3Q86VS8 718 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 CCDC105Q8IYK2 499 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 ARFGAP2Q8N6H7 521 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 BANK1Q8NDB2 785 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 FAM71BQ8TC56 605 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 NAP1L3Q99457 506 aaPredicted RBP9.25□□□□□ -0.93
PTPRK-206ENST00000368215 ZNF277Q9NRM2 450 aaPredicted RBP9.25□□□□□ -0.93
PTPRK-206ENST00000368215 PALMO75781 387 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 NDUFB10O96000 172 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 MYCNP04198 464 aaPredicted RBP9.25□□□□□ -0.93
PTPRK-206ENST00000368215 MDM2Q00987 491 aaPredicted RBP9.25□□□□□ -0.93
PTPRK-206ENST00000368215 KRT71Q3SY84 523 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 LRRC45Q96CN5 670 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 WDR11Q9BZH6 1224 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 PRM3Q9NNZ6 103 aa9.25□□□□□ -0.93
PTPRK-206ENST00000368215 GAP43P17677 238 aa9.24□□□□□ -0.93
PTPRK-206ENST00000368215 TNFAIP1Q13829 316 aa9.24□□□□□ -0.93
PTPRK-206ENST00000368215 PPP1R18Q6NYC8 613 aa9.24□□□□□ -0.93
PTPRK-206ENST00000368215 AP1M1Q9BXS5 423 aa9.24□□□□□ -0.93
PTPRK-206ENST00000368215 L2HGDHQ9H9P8 463 aa9.24□□□□□ -0.93
PTPRK-206ENST00000368215 ITIH6Q6UXX5 1313 aa9.24□□□□□ -0.93
PTPRK-206ENST00000368215 NR3C1P04150 777 aa9.24□□□□□ -0.93
PTPRK-206ENST00000368215 SLURP2P0DP57 97 aa9.24□□□□□ -0.93
PTPRK-206ENST00000368215 HSPA1LP34931 641 aa9.24□□□□□ -0.93
PTPRK-206ENST00000368215 CTNNA1P35221 906 aaKnown RBP9.24□□□□□ -0.93
PTPRK-206ENST00000368215 GNGT1P63211 74 aa9.24□□□□□ -0.93
PTPRK-206ENST00000368215 PDIA5Q14554 519 aa9.24□□□□□ -0.93
PTPRK-206ENST00000368215 MESDQ14696 234 aa9.24□□□□□ -0.93
PTPRK-206ENST00000368215 OTUD6BQ8N6M0 293 aa9.24□□□□□ -0.93
PTPRK-206ENST00000368215 MMS19Q96T76 1030 aa9.24□□□□□ -0.93
PTPRK-206ENST00000368215 ASIC3Q9UHC3 531 aa9.24□□□□□ -0.93
PTPRK-206ENST00000368215 EIF3CLB5ME19 914 aaKnown RBP9.24□□□□□ -0.93
PTPRK-206ENST00000368215 PLEKP08567 350 aaPredicted RBP9.24□□□□□ -0.93
PTPRK-206ENST00000368215 VPS41P49754 854 aa9.24□□□□□ -0.93
PTPRK-206ENST00000368215 MRRFQ96E11 262 aaKnown RBP9.24□□□□□ -0.93
PTPRK-206ENST00000368215 EIF3CQ99613 913 aaKnown RBP9.24□□□□□ -0.93
PTPRK-206ENST00000368215 KCNK9Q9NPC2 374 aa9.24□□□□□ -0.93
PTPRK-206ENST00000368215 MED4Q9NPJ6 270 aa9.24□□□□□ -0.93
PTPRK-206ENST00000368215 INTS13Q9NVM9 706 aa9.24□□□□□ -0.93
PTPRK-206ENST00000368215 CEP72Q9P209 647 aa9.24□□□□□ -0.93
PTPRK-206ENST00000368215 ZBTB12Q9Y330 459 aaPredicted RBP9.24□□□□□ -0.93
PTPRK-206ENST00000368215 AFDNP55196 1824 aaKnown RBP9.24□□□□□ -0.93
PTPRK-206ENST00000368215 ABCB11O95342 1321 aa9.24□□□□□ -0.93
PTPRK-206ENST00000368215 A0A1W2PRG0 241 aa9.23□□□□□ -0.93
PTPRK-206ENST00000368215 ESYT3A0FGR9 886 aa9.23□□□□□ -0.93
PTPRK-206ENST00000368215 DESP17661 470 aa9.23□□□□□ -0.93
PTPRK-206ENST00000368215 CCDC93Q567U6 631 aa9.23□□□□□ -0.93
PTPRK-206ENST00000368215 CDKAL1Q5VV42 579 aa9.23□□□□□ -0.93
PTPRK-206ENST00000368215 MCF2L2Q86YR7 1114 aa9.23□□□□□ -0.93
PTPRK-206ENST00000368215 PROM2Q8N271 834 aa9.23□□□□□ -0.93
PTPRK-206ENST00000368215 BBXQ8WY36 941 aaPredicted RBP9.23□□□□□ -0.93
PTPRK-206ENST00000368215 POMGNT1Q8WZA1 660 aa9.23□□□□□ -0.93
PTPRK-206ENST00000368215 PAGR1Q9BTK6 254 aa9.23□□□□□ -0.93
PTPRK-206ENST00000368215 SMARCAL1Q9NZC9 954 aa9.23□□□□□ -0.93
PTPRK-206ENST00000368215 GINS2Q9Y248 185 aa9.23□□□□□ -0.93
PTPRK-206ENST00000368215 TFRCP02786 760 aaKnown RBP9.23□□□□□ -0.93
PTPRK-206ENST00000368215 FERP16591 822 aa9.23□□□□□ -0.93
PTPRK-206ENST00000368215 TAL1P17542 331 aaPredicted RBP9.23□□□□□ -0.93
PTPRK-206ENST00000368215 GRB10Q13322 594 aa9.23□□□□□ -0.93
PTPRK-206ENST00000368215 KNOP1Q1ED39 458 aaKnown RBP9.23□□□□□ -0.93
PTPRK-206ENST00000368215 TTLL6Q8N841 843 aa9.23□□□□□ -0.93
PTPRK-206ENST00000368215 NOA1Q8NC60 698 aaKnown RBP9.23□□□□□ -0.93
PTPRK-206ENST00000368215 GOLGA5Q8TBA6 731 aa9.23□□□□□ -0.93
PTPRK-206ENST00000368215 SUGCTQ9HAC7 445 aa9.23□□□□□ -0.93
PTPRK-206ENST00000368215 UBE2TQ9NPD8 197 aaPredicted RBP9.23□□□□□ -0.93
PTPRK-206ENST00000368215 BZW2Q9Y6E2 419 aaKnown RBP9.23□□□□□ -0.93
PTPRK-206ENST00000368215 CHD2O14647 1828 aaKnown RBP9.23□□□□□ -0.93
PTPRK-206ENST00000368215 HNRNPDLO14979 420 aaKnown RBP9.23□□□□□ -0.93
PTPRK-206ENST00000368215 PHLDB2Q86SQ0 1253 aa9.23□□□□□ -0.93
PTPRK-206ENST00000368215 PPANQ9NQ55 473 aaKnown RBP9.23□□□□□ -0.93
PTPRK-206ENST00000368215 ADAM21Q9UKJ8 722 aa9.23□□□□□ -0.93
PTPRK-206ENST00000368215 ACTN1P12814 892 aa9.23□□□□□ -0.93
PTPRK-206ENST00000368215 NMT1P30419 496 aaKnown RBP9.23□□□□□ -0.93
PTPRK-206ENST00000368215 ORC2Q13416 577 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms