RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 NUB1Q9Y5A7 615 aa4.29□□□□□ -1.72
SMC1B-201ENST00000357450 PLXNA4Q9HCM2 1894 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 CACNA1BQ00975 2339 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 RFX7Q2KHR2 1363 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 ZNF536O15090 1300 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 GRXCR1A8MXD5 290 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 H3BQ06 376 aaPredicted RBP4.28□□□□□ -1.72
SMC1B-201ENST00000357450 SIAH2O43255 324 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 ERLIN2O94905 339 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 GH1P01241 217 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 AMHP03971 560 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 BMP6P22004 513 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 PSMA5P28066 241 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 RABGGTBP53611 331 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 ITGA7Q13683 1181 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 PTGISQ16647 500 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 RABL6Q3YEC7 729 aaPredicted RBP4.28□□□□□ -1.72
SMC1B-201ENST00000357450 CES5AQ6NT32 575 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 LLGL2Q6P1M3 1020 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 PDXDC2PQ6P474 469 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 LRSAM1Q6UWE0 723 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 ENGASEQ8NFI3 743 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 AFG1LQ8WV93 481 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 TRIB2Q92519 343 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 TMEM169Q96HH4 297 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 ZNF333Q96JL9 665 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 NKX2-4Q9H2Z4 354 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 KNTC1P50748 2209 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 LOXHD1Q8IVV2 1947 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 CCND2P30279 289 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 HSPA4P34932 840 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 GJA5P36382 358 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 CDC37Q16543 378 aaPredicted RBP4.28□□□□□ -1.72
SMC1B-201ENST00000357450 DGKDQ16760 1214 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 LIAT1Q6ZQX7 453 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 FAM122AQ96E09 287 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 GMLQ99445 158 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 KATNAL1Q9BW62 490 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 THEGQ9P2T0 379 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 CCDC171Q6TFL3 1326 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 NMT2O60551 498 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 GHRP10912 638 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 ECM1Q16610 540 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 GPATCH4Q5T3I0 446 aaKnown RBP4.28□□□□□ -1.72
SMC1B-201ENST00000357450 CMTR1Q8N1G2 835 aaKnown RBP4.28□□□□□ -1.72
SMC1B-201ENST00000357450 NACA2Q9H009 215 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 PUS7LQ9H0K6 701 aaKnown RBP4.28□□□□□ -1.72
SMC1B-201ENST00000357450 TRPV6Q9H1D0 765 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 ZNF576Q9H609 170 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 PSTPIP2Q9H939 334 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 AAASQ9NRG9 546 aa4.28□□□□□ -1.72
SMC1B-201ENST00000357450 GOLGA4Q13439 2230 aaKnown RBP4.27□□□□□ -1.73
SMC1B-201ENST00000357450 AKAP9Q99996 3911 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 KIAA1217Q5T5P2 1943 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 DDX11L8A8MPP1 907 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 INO80B-WBP1J3KQ70 363 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 RTN1Q16799 776 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 TTBK2Q6IQ55 1244 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 PADI6Q6TGC4 694 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 CATSPER4Q7RTX7 472 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 ATG9AQ7Z3C6 839 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 NLRP4Q96MN2 994 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 MTG1Q9BT17 334 aaPredicted RBP4.27□□□□□ -1.73
SMC1B-201ENST00000357450 INO80BQ9C086 356 aaPredicted RBP4.27□□□□□ -1.73
SMC1B-201ENST00000357450 SSC5DA1L4H1 1573 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 KLF18A0A0U1RQI7 1052 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 VPS37CA5D8V6 355 aaPredicted RBP4.27□□□□□ -1.73
SMC1B-201ENST00000357450 ZBTB43O43298 467 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 HSPD1P10809 573 aaKnown RBP4.27□□□□□ -1.73
SMC1B-201ENST00000357450 MCM5P33992 734 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 ACLYP53396 1101 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 GUCY1B3Q02153 619 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 PPFIA1Q13136 1202 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 KIAA0753Q2KHM9 967 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 SHROOM1Q2M3G4 852 aaPredicted RBP4.27□□□□□ -1.73
SMC1B-201ENST00000357450 FAM160B1Q5W0V3 765 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 PPP1R18Q6NYC8 613 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 C17orf99Q6UX52 265 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 CYFIP1Q7L576 1253 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 DPH6Q7L8W6 267 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 FIBCD1Q8N539 461 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 CHST13Q8NET6 341 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 FAM227BQ96M60 508 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 UHRF1Q96T88 793 aaPredicted RBP4.27□□□□□ -1.73
SMC1B-201ENST00000357450 KIAA1683Q9H0B3 1180 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 TMX1Q9H3N1 280 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 INCENPQ9NQS7 918 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 AFG3L2Q9Y4W6 797 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 PCDHB12Q9Y5F1 795 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 DDX49Q9Y6V7 483 aaKnown RBP4.27□□□□□ -1.73
SMC1B-201ENST00000357450 A0A0G2JLL6 359 aaPredicted RBP4.27□□□□□ -1.73
SMC1B-201ENST00000357450 M0R2C6 588 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 PRC1O43663 620 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 ACTN4O43707 911 aaKnown RBP4.27□□□□□ -1.73
SMC1B-201ENST00000357450 DTNBO60941 627 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 ZNF286BP0CG31 522 aa4.27□□□□□ -1.73
SMC1B-201ENST00000357450 ALDH7A1P49419 539 aaKnown RBP4.27□□□□□ -1.73
SMC1B-201ENST00000357450 METAP2P50579 478 aaKnown RBP eCLIP4.27□□□□□ -1.73
SMC1B-201ENST00000357450 FKBP1AP62942 108 aaKnown RBP4.27□□□□□ -1.73
SMC1B-201ENST00000357450 TBC1D8BQ0IIM8 1120 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms