RNA–Protein interactions for RNA: ENST00000354421.7

C11orf54-202, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 1,733 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-202ENST00000354421 CTSWP56202 376 aa8.33□□□□□ -1.08
C11orf54-202ENST00000354421 ZBED6P86452 979 aa8.33□□□□□ -1.08
C11orf54-202ENST00000354421 APBA1Q02410 837 aa8.33□□□□□ -1.08
C11orf54-202ENST00000354421 NPY5RQ15761 445 aa8.33□□□□□ -1.08
C11orf54-202ENST00000354421 FIGNQ5HY92 759 aa8.33□□□□□ -1.08
C11orf54-202ENST00000354421 RRP12Q5JTH9 1297 aaKnown RBP8.33□□□□□ -1.08
C11orf54-202ENST00000354421 EMC10Q5UCC4 262 aa8.33□□□□□ -1.08
C11orf54-202ENST00000354421 SND1Q7KZF4 910 aaKnown RBP eCLIP8.33□□□□□ -1.08
C11orf54-202ENST00000354421 BPHLQ86WA6 291 aaPredicted RBP8.33□□□□□ -1.08
C11orf54-202ENST00000354421 LINC00528Q8N1L1 170 aa8.33□□□□□ -1.08
C11orf54-202ENST00000354421 MEIOBQ8N635 442 aa8.33□□□□□ -1.08
C11orf54-202ENST00000354421 LPIN2Q92539 896 aa8.33□□□□□ -1.08
C11orf54-202ENST00000354421 FOXJ1Q92949 421 aa8.33□□□□□ -1.08
C11orf54-202ENST00000354421 ZBTB9Q96C00 473 aa8.33□□□□□ -1.08
C11orf54-202ENST00000354421 IQCDQ96DY2 449 aa8.33□□□□□ -1.08
C11orf54-202ENST00000354421 FAM89AQ96GI7 184 aa8.33□□□□□ -1.08
C11orf54-202ENST00000354421 CAPZA3Q96KX2 299 aa8.33□□□□□ -1.08
C11orf54-202ENST00000354421 TACO1Q9BSH4 297 aaKnown RBP8.33□□□□□ -1.08
C11orf54-202ENST00000354421 LACRTQ9GZZ8 138 aa8.33□□□□□ -1.08
C11orf54-202ENST00000354421 BLZF1Q9H2G9 400 aa8.33□□□□□ -1.08
C11orf54-202ENST00000354421 ARMT1Q9H993 441 aa8.33□□□□□ -1.08
C11orf54-202ENST00000354421 A1CFQ9NQ94 594 aaKnown RBP8.33□□□□□ -1.08
C11orf54-202ENST00000354421 CNNM1Q9NRU3 951 aa8.33□□□□□ -1.08
C11orf54-202ENST00000354421 RBM28Q9NW13 759 aaKnown RBP8.33□□□□□ -1.08
C11orf54-202ENST00000354421 ZNHIT6Q9NWK9 470 aaKnown RBP8.33□□□□□ -1.08
C11orf54-202ENST00000354421 VPS54Q9P1Q0 977 aa8.33□□□□□ -1.08
C11orf54-202ENST00000354421 TAF1LQ8IZX4 1826 aa8.33□□□□□ -1.08
C11orf54-202ENST00000354421 MUC6Q6W4X9 2439 aa8.33□□□□□ -1.08
C11orf54-202ENST00000354421 A0A1W2PQJ5 194 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 SRRM3A6NNA2 597 aaPredicted RBP8.32□□□□□ -1.08
C11orf54-202ENST00000354421 FAM155AB1AL88 458 aaPredicted RBP8.32□□□□□ -1.08
C11orf54-202ENST00000354421 ZEB2O60315 1214 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 FSBPO95073 299 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 CALM1P0DP23 149 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 CALM2P0DP24 149 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 CALM3P0DP25 149 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 INPP5BP32019 993 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 LONP1P36776 959 aaKnown RBP8.32□□□□□ -1.08
C11orf54-202ENST00000354421 TDO2P48775 406 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 EPHB4P54760 987 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 C2orf54Q08AI8 447 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 PUM3Q15397 648 aaKnown RBP8.32□□□□□ -1.08
C11orf54-202ENST00000354421 ARL6IP4Q66PJ3 421 aaKnown RBP8.32□□□□□ -1.08
C11orf54-202ENST00000354421 EMBQ6PCB8 327 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 KCNV1Q6PIU1 500 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 CREG2Q8IUH2 290 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 ANKRD18AQ8IVF6 992 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 GSPT2Q8IYD1 628 aaKnown RBP8.32□□□□□ -1.08
C11orf54-202ENST00000354421 CMTR1Q8N1G2 835 aaKnown RBP8.32□□□□□ -1.08
C11orf54-202ENST00000354421 CCDC82Q8N4S0 544 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 MAGEB6Q8N7X4 407 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 TTLL6Q8N841 843 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 PRPF38AQ8NAV1 312 aaKnown RBP8.32□□□□□ -1.08
C11orf54-202ENST00000354421 SPATA5Q8NB90 893 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 C1orf131Q8NDD1 294 aaKnown RBP8.32□□□□□ -1.08
C11orf54-202ENST00000354421 BCAS4Q8TDM0 211 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 NUP133Q8WUM0 1156 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 STAMQ92783 540 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 ZKSCAN3Q9BRR0 538 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 UBAC1Q9BSL1 405 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 GREM2Q9H772 168 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 NHEJ1Q9H9Q4 299 aaPredicted RBP8.32□□□□□ -1.08
C11orf54-202ENST00000354421 MAGEC2Q9UBF1 373 aaPredicted RBP8.32□□□□□ -1.08
C11orf54-202ENST00000354421 GDAQ9Y2T3 454 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 MYH13Q9UKX3 1938 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 PCDH11XQ9BZA7 1347 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 PCDH11YQ9BZA8 1340 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 CACNA1BQ00975 2339 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 ZNF185O15231 689 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 PRKAB2O43741 272 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 TACC1O75410 805 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 ZMYND10O75800 440 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 IPO7O95373 1038 aaKnown RBP8.32□□□□□ -1.08
C11orf54-202ENST00000354421 MYL1P05976 194 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 IDEP14735 1019 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 HNRNPH3P31942 346 aaKnown RBP8.32□□□□□ -1.08
C11orf54-202ENST00000354421 FNTAP49354 379 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 PPARAQ07869 468 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 TTLL12Q14166 644 aaPredicted RBP8.32□□□□□ -1.08
C11orf54-202ENST00000354421 AGERQ15109 404 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 IL17AQ16552 155 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 GLE1Q53GS7 698 aaKnown RBP8.32□□□□□ -1.08
C11orf54-202ENST00000354421 TTI2Q6NXR4 508 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 KIF6Q6ZMV9 814 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 LCORLQ8N3X6 602 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 CCDC155Q8N6L0 562 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 C4orf32Q8N8J7 132 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 TRIM58Q8NG06 486 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 SECISBP2LQ93073 1101 aaKnown RBP8.32□□□□□ -1.08
C11orf54-202ENST00000354421 DHTKD1Q96HY7 919 aaPredicted RBP8.32□□□□□ -1.08
C11orf54-202ENST00000354421 GUCD1Q96NT3 240 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 CCDC85AQ96PX6 553 aaPredicted RBP8.32□□□□□ -1.08
C11orf54-202ENST00000354421 EXOC1Q9NV70 894 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 GGA2Q9UJY4 613 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 SLC4A4Q9Y6R1 1079 aa8.32□□□□□ -1.08
C11orf54-202ENST00000354421 MROH5Q6ZUA9 1318 aa8.31□□□□□ -1.08
C11orf54-202ENST00000354421 DLEC1Q9Y238 1755 aa8.31□□□□□ -1.08
C11orf54-202ENST00000354421 KLRC4O43908 158 aa8.31□□□□□ -1.08
C11orf54-202ENST00000354421 USO1O60763 962 aaKnown RBP8.31□□□□□ -1.08
C11orf54-202ENST00000354421 HSF2BPO75031 334 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms