RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 SLCO1A2P46721 670 aa17.36■□□□□ 0.37
PTPN11-201ENST00000351677 USP14P54578 494 aa17.36■□□□□ 0.37
PTPN11-201ENST00000351677 DYNLT1P63172 113 aa17.36■□□□□ 0.37
PTPN11-201ENST00000351677 RINT1Q6NUQ1 792 aa17.36■□□□□ 0.37
PTPN11-201ENST00000351677 NBPF10Q6P3W6 841 aaKnown RBP17.36■□□□□ 0.37
PTPN11-201ENST00000351677 DHX40Q8IX18 779 aaKnown RBP17.36■□□□□ 0.37
PTPN11-201ENST00000351677 NBPF15Q8N660 670 aa17.36■□□□□ 0.37
PTPN11-201ENST00000351677 LRRC8CQ8TDW0 803 aa17.36■□□□□ 0.37
PTPN11-201ENST00000351677 ANKRD36BP1Q96IX9 119 aa17.36■□□□□ 0.37
PTPN11-201ENST00000351677 PBKQ96KB5 322 aa17.36■□□□□ 0.37
PTPN11-201ENST00000351677 MIS12Q9H081 205 aa17.36■□□□□ 0.37
PTPN11-201ENST00000351677 CHGBP05060 677 aa17.36■□□□□ 0.37
PTPN11-201ENST00000351677 CASP8Q14790 479 aa17.36■□□□□ 0.37
PTPN11-201ENST00000351677 TRIP13Q15645 432 aaPredicted RBP17.36■□□□□ 0.37
PTPN11-201ENST00000351677 UNC13DQ70J99 1090 aa17.36■□□□□ 0.37
PTPN11-201ENST00000351677 FOXN1O15353 648 aa17.36■□□□□ 0.37
PTPN11-201ENST00000351677 ECEL1O95672 775 aa17.36■□□□□ 0.37
PTPN11-201ENST00000351677 ITKQ08881 620 aa17.36■□□□□ 0.37
PTPN11-201ENST00000351677 NXNQ6DKJ4 435 aa17.36■□□□□ 0.37
PTPN11-201ENST00000351677 POLD4Q9HCU8 107 aa17.36■□□□□ 0.37
PTPN11-201ENST00000351677 RFX7Q2KHR2 1363 aa17.36■□□□□ 0.37
PTPN11-201ENST00000351677 SPATS2Q86XZ4 545 aaKnown RBP17.36■□□□□ 0.37
PTPN11-201ENST00000351677 RAB3IPQ96QF0 476 aaPredicted RBP17.36■□□□□ 0.37
PTPN11-201ENST00000351677 A6NJR5 290 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 USP27XA6NNY8 438 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 CNGA1P29973 690 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 OSTNP61366 133 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 KRT27Q7Z3Y8 459 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 NXF1Q9UBU9 619 aaKnown RBP17.35■□□□□ 0.37
PTPN11-201ENST00000351677 TACC3Q9Y6A5 838 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 USP17L15C9J2P7 530 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 USP17L13C9JLJ4 530 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 USP17L11C9JVI0 530 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 USP17L18D6R9N7 530 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 USP17L22D6RA61 530 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 USP17L17D6RBQ6 530 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 USP17L19D6RCP7 530 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 USP17L20D6RJB6 530 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 NPR1P16066 1061 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 USP17L24Q0WX57 530 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 USP17L6PQ6QN14 398 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 TRIM11Q96F44 468 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 COL15A1P39059 1388 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 TLR3O15455 904 aaKnown RBP17.35■□□□□ 0.37
PTPN11-201ENST00000351677 PP2D1A8MPX8 630 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 ZKSCAN8Q15776 578 aaPredicted RBP17.35■□□□□ 0.37
PTPN11-201ENST00000351677 CCDC38Q502W7 563 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 ALKBH5Q6P6C2 394 aaKnown RBP17.35■□□□□ 0.37
PTPN11-201ENST00000351677 ATG9AQ7Z3C6 839 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 CEP95Q96GE4 821 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 SCYL1Q96KG9 808 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 EFCC1Q9HA90 598 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 PCDHA6Q9UN73 950 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 PCDHA8Q9Y5H6 950 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 KRT1P04264 644 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 CD58P19256 250 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 NNTQ13423 1086 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 SHC4Q6S5L8 630 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.35■□□□□ 0.37
PTPN11-201ENST00000351677 BPIFA3Q9BQP9 254 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 SPC25Q9HBM1 224 aa17.35■□□□□ 0.37
PTPN11-201ENST00000351677 LGALS16A8MUM7 142 aa17.34■□□□□ 0.37
PTPN11-201ENST00000351677 C10orf76Q5T2E6 689 aa17.34■□□□□ 0.37
PTPN11-201ENST00000351677 RNF14Q9UBS8 474 aa17.34■□□□□ 0.37
PTPN11-201ENST00000351677 ANAPC5Q9UJX4 755 aa17.34■□□□□ 0.37
PTPN11-201ENST00000351677 LMNB2Q03252 620 aa17.34■□□□□ 0.37
PTPN11-201ENST00000351677 DMTNQ08495 405 aa17.34■□□□□ 0.37
PTPN11-201ENST00000351677 SPOUT1Q5T280 376 aaKnown RBP17.34■□□□□ 0.37
PTPN11-201ENST00000351677 PPP1R16BQ96T49 567 aa17.34■□□□□ 0.37
PTPN11-201ENST00000351677 FOXP4Q8IVH2 680 aaPredicted RBP17.34■□□□□ 0.37
PTPN11-201ENST00000351677 TULP4Q9NRJ4 1543 aa17.34■□□□□ 0.37
PTPN11-201ENST00000351677 ZBTB5O15062 677 aa17.34■□□□□ 0.37
PTPN11-201ENST00000351677 GUCY1A2P33402 732 aa17.34■□□□□ 0.37
PTPN11-201ENST00000351677 TMEM179Q6ZVK1 233 aa17.34■□□□□ 0.37
PTPN11-201ENST00000351677 MAP7D3Q8IWC1 876 aa17.34■□□□□ 0.37
PTPN11-201ENST00000351677 E9PMD0 336 aa17.34■□□□□ 0.37
PTPN11-201ENST00000351677 DPY19L2Q6NUT2 758 aa17.34■□□□□ 0.37
PTPN11-201ENST00000351677 CD209Q9NNX6 404 aa17.34■□□□□ 0.37
PTPN11-201ENST00000351677 USP17L10C9JJH3 530 aa17.33■□□□□ 0.37
PTPN11-201ENST00000351677 INHBAP08476 426 aa17.33■□□□□ 0.37
PTPN11-201ENST00000351677 MMP10P09238 476 aa17.33■□□□□ 0.37
PTPN11-201ENST00000351677 PNMA6AP0CW24 399 aaPredicted RBP17.33■□□□□ 0.37
PTPN11-201ENST00000351677 CRKP46108 304 aa17.33■□□□□ 0.37
PTPN11-201ENST00000351677 TXNRD1Q16881 649 aa17.33■□□□□ 0.37
PTPN11-201ENST00000351677 RPUSD2Q8IZ73 545 aaKnown RBP17.33■□□□□ 0.37
PTPN11-201ENST00000351677 ZNF341Q9BYN7 854 aa17.33■□□□□ 0.37
PTPN11-201ENST00000351677 TBK1Q9UHD2 729 aa17.33■□□□□ 0.37
PTPN11-201ENST00000351677 PALM3A6NDB9 673 aaPredicted RBP17.33■□□□□ 0.37
PTPN11-201ENST00000351677 PEX3P56589 373 aa17.33■□□□□ 0.37
PTPN11-201ENST00000351677 TRIM68Q6AZZ1 485 aa17.33■□□□□ 0.37
PTPN11-201ENST00000351677 NARFQ9UHQ1 456 aa17.33■□□□□ 0.37
PTPN11-201ENST00000351677 CD2APQ9Y5K6 639 aa17.33■□□□□ 0.37
PTPN11-201ENST00000351677 E9PCH4 1651 aa17.33■□□□□ 0.37
PTPN11-201ENST00000351677 TEX33O43247 280 aa17.33■□□□□ 0.36
PTPN11-201ENST00000351677 GYS2P54840 703 aa17.33■□□□□ 0.36
PTPN11-201ENST00000351677 SESN3P58005 492 aa17.33■□□□□ 0.36
PTPN11-201ENST00000351677 TMED2Q15363 201 aa17.33■□□□□ 0.36
PTPN11-201ENST00000351677 MUM1Q2TAK8 710 aa17.33■□□□□ 0.36
PTPN11-201ENST00000351677 PPP4R3CPQ6ZMV5 832 aa17.33■□□□□ 0.36
PTPN11-201ENST00000351677 CLEC17AQ6ZS10 378 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms