RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 GNAT1P11488 350 aa21.76■■□□□ 1.07
SYNE4-202ENST00000340477 ITGB3BPQ13352 177 aaPredicted RBP21.76■■□□□ 1.07
SYNE4-202ENST00000340477 BFSP2Q13515 415 aa21.76■■□□□ 1.07
SYNE4-202ENST00000340477 HABP4Q5JVS0 413 aaKnown RBP21.76■■□□□ 1.07
SYNE4-202ENST00000340477 TDHQ8IZJ6 230 aa21.76■■□□□ 1.07
SYNE4-202ENST00000340477 PPP1R13LQ8WUF5 828 aa21.76■■□□□ 1.07
SYNE4-202ENST00000340477 C8orf76Q96K31 380 aa21.76■■□□□ 1.07
SYNE4-202ENST00000340477 NOC4LQ9BVI4 516 aaKnown RBP21.76■■□□□ 1.07
SYNE4-202ENST00000340477 PRO3102Q9H379 93 aa21.76■■□□□ 1.07
SYNE4-202ENST00000340477 SMARCAD1Q9H4L7 1026 aa21.76■■□□□ 1.07
SYNE4-202ENST00000340477 ERAP1Q9NZ08 941 aa21.76■■□□□ 1.07
SYNE4-202ENST00000340477 EMSYQ7Z589 1322 aa21.76■■□□□ 1.07
SYNE4-202ENST00000340477 KAT6AQ92794 2004 aa21.75■■□□□ 1.07
SYNE4-202ENST00000340477 C17orf102A2RUQ5 167 aa21.75■■□□□ 1.07
SYNE4-202ENST00000340477 MMP1P03956 469 aa21.75■■□□□ 1.07
SYNE4-202ENST00000340477 ACTR2P61160 394 aa21.75■■□□□ 1.07
SYNE4-202ENST00000340477 INF2Q27J81 1249 aa21.75■■□□□ 1.07
SYNE4-202ENST00000340477 GDF6Q6KF10 455 aaPredicted RBP21.75■■□□□ 1.07
SYNE4-202ENST00000340477 MOXD1Q6UVY6 613 aa21.75■■□□□ 1.07
SYNE4-202ENST00000340477 PIK3AP1Q6ZUJ8 805 aa21.75■■□□□ 1.07
SYNE4-202ENST00000340477 NEK8Q86SG6 692 aa21.75■■□□□ 1.07
SYNE4-202ENST00000340477 TRIM50Q86XT4 487 aa21.75■■□□□ 1.07
SYNE4-202ENST00000340477 RETREG2Q8NC44 543 aa21.75■■□□□ 1.07
SYNE4-202ENST00000340477 TNPO1Q92973 898 aaKnown RBP21.75■■□□□ 1.07
SYNE4-202ENST00000340477 GJB4Q9NTQ9 266 aa21.75■■□□□ 1.07
SYNE4-202ENST00000340477 TRIOBPQ9H2D6 2365 aa21.74■■□□□ 1.07
SYNE4-202ENST00000340477 GSTTP1A0A1W2PQM5 241 aa21.74■■□□□ 1.07
SYNE4-202ENST00000340477 CYP2C9P11712 490 aa21.74■■□□□ 1.07
SYNE4-202ENST00000340477 KRT76Q01546 638 aa21.74■■□□□ 1.07
SYNE4-202ENST00000340477 LETM2Q2VYF4 491 aa21.74■■□□□ 1.07
SYNE4-202ENST00000340477 FAM160B1Q5W0V3 765 aa21.74■■□□□ 1.07
SYNE4-202ENST00000340477 KRT40Q6A162 431 aa21.74■■□□□ 1.07
SYNE4-202ENST00000340477 CAGE1Q8TC20 777 aa21.74■■□□□ 1.07
SYNE4-202ENST00000340477 PCDH10Q9P2E7 1040 aa21.74■■□□□ 1.07
SYNE4-202ENST00000340477 TANC1Q9C0D5 1861 aa21.73■■□□□ 1.07
SYNE4-202ENST00000340477 BACH1O14867 736 aa21.73■■□□□ 1.07
SYNE4-202ENST00000340477 SMIM10L2AP0DMW4 78 aa21.73■■□□□ 1.07
SYNE4-202ENST00000340477 SMIM10L2BP0DMW5 78 aa21.73■■□□□ 1.07
SYNE4-202ENST00000340477 GCFC2P16383 781 aaKnown RBP21.73■■□□□ 1.07
SYNE4-202ENST00000340477 ITGB8P26012 769 aa21.73■■□□□ 1.07
SYNE4-202ENST00000340477 CYP2C18P33260 490 aa21.73■■□□□ 1.07
SYNE4-202ENST00000340477 GNL2Q13823 731 aaKnown RBP21.73■■□□□ 1.07
SYNE4-202ENST00000340477 Q4G0T1 1027 aa21.73■■□□□ 1.07
SYNE4-202ENST00000340477 ZNF746Q6NUN9 644 aaPredicted RBP21.73■■□□□ 1.07
SYNE4-202ENST00000340477 MIS18BP1Q6P0N0 1132 aa21.73■■□□□ 1.07
SYNE4-202ENST00000340477 SMAP1Q8IYB5 467 aaPredicted RBP21.73■■□□□ 1.07
SYNE4-202ENST00000340477 DIS3L2Q8IYB7 885 aaKnown RBP21.73■■□□□ 1.07
SYNE4-202ENST00000340477 OXER1Q8TDS5 423 aa21.73■■□□□ 1.07
SYNE4-202ENST00000340477 TMX3Q96JJ7 454 aa21.73■■□□□ 1.07
SYNE4-202ENST00000340477 DDX25Q9UHL0 483 aaKnown RBP21.73■■□□□ 1.07
SYNE4-202ENST00000340477 CYP3A7-CYP3A51PA0A087WV96 503 aa21.72■■□□□ 1.07
SYNE4-202ENST00000340477 PITPNM1O00562 1244 aa21.72■■□□□ 1.07
SYNE4-202ENST00000340477 GAS7O60861 476 aa21.72■■□□□ 1.07
SYNE4-202ENST00000340477 TDP2O95551 362 aa21.72■■□□□ 1.07
SYNE4-202ENST00000340477 CYP3A7P24462 503 aa21.72■■□□□ 1.07
SYNE4-202ENST00000340477 ATP6V0A1Q93050 837 aa21.72■■□□□ 1.07
SYNE4-202ENST00000340477 LENG9Q96B70 501 aa21.72■■□□□ 1.07
SYNE4-202ENST00000340477 RIT2Q99578 217 aa21.72■■□□□ 1.07
SYNE4-202ENST00000340477 TEKT3Q9BXF9 490 aa21.72■■□□□ 1.07
SYNE4-202ENST00000340477 MSH4O15457 936 aa21.71■■□□□ 1.07
SYNE4-202ENST00000340477 MARCH6O60337 910 aa21.71■■□□□ 1.07
SYNE4-202ENST00000340477 CCNT1O60563 726 aaKnown RBP21.71■■□□□ 1.07
SYNE4-202ENST00000340477 LGR5O75473 907 aa21.71■■□□□ 1.07
SYNE4-202ENST00000340477 MARK3P27448 753 aa21.71■■□□□ 1.07
SYNE4-202ENST00000340477 SLC26A2P50443 739 aa21.71■■□□□ 1.07
SYNE4-202ENST00000340477 CCL23P55773 120 aa21.71■■□□□ 1.07
SYNE4-202ENST00000340477 NR5A1Q13285 461 aa21.71■■□□□ 1.07
SYNE4-202ENST00000340477 PTK7Q13308 1070 aa21.71■■□□□ 1.07
SYNE4-202ENST00000340477 LRCH2Q5VUJ6 765 aa21.71■■□□□ 1.07
SYNE4-202ENST00000340477 PSRC1Q6PGN9 363 aaPredicted RBP21.71■■□□□ 1.07
SYNE4-202ENST00000340477 UIMC1Q96RL1 719 aa21.71■■□□□ 1.07
SYNE4-202ENST00000340477 TRPC6Q9Y210 931 aa21.71■■□□□ 1.07
SYNE4-202ENST00000340477 TELO2Q9Y4R8 837 aa21.71■■□□□ 1.07
SYNE4-202ENST00000340477 SAMM50Q9Y512 469 aa21.71■■□□□ 1.07
SYNE4-202ENST00000340477 WDR64B1ANS9 1081 aa21.7■■□□□ 1.06
SYNE4-202ENST00000340477 PSAPP07602 524 aa21.7■■□□□ 1.06
SYNE4-202ENST00000340477 CSF2RAP15509 400 aa21.7■■□□□ 1.06
SYNE4-202ENST00000340477 RFC2P35250 354 aa21.7■■□□□ 1.06
SYNE4-202ENST00000340477 STAT5BP51692 787 aa21.7■■□□□ 1.06
SYNE4-202ENST00000340477 PPFIA1Q13136 1202 aa21.7■■□□□ 1.06
SYNE4-202ENST00000340477 PPP4R3AQ6IN85 833 aa21.7■■□□□ 1.06
SYNE4-202ENST00000340477 PLPPR4Q7Z2D5 763 aa21.7■■□□□ 1.06
SYNE4-202ENST00000340477 RPUSD2Q8IZ73 545 aaKnown RBP21.7■■□□□ 1.06
SYNE4-202ENST00000340477 AFAP1L1Q8TED9 768 aa21.7■■□□□ 1.06
SYNE4-202ENST00000340477 SLC5A5Q92911 643 aa21.7■■□□□ 1.06
SYNE4-202ENST00000340477 ZNF302Q9NR11 478 aa21.7■■□□□ 1.06
SYNE4-202ENST00000340477 NRCAMQ92823 1304 aa21.7■■□□□ 1.06
SYNE4-202ENST00000340477 MYH9P35579 1960 aaKnown RBP21.7■■□□□ 1.06
SYNE4-202ENST00000340477 TRIP12Q14669 1992 aaPredicted RBP21.7■■□□□ 1.06
SYNE4-202ENST00000340477 BTBD18B2RXH4 712 aa21.69■■□□□ 1.06
SYNE4-202ENST00000340477 DHX15O43143 795 aaKnown RBP21.69■■□□□ 1.06
SYNE4-202ENST00000340477 CCNE2O96020 404 aa21.69■■□□□ 1.06
SYNE4-202ENST00000340477 SFNP31947 248 aa21.69■■□□□ 1.06
SYNE4-202ENST00000340477 JAK3P52333 1124 aa21.69■■□□□ 1.06
SYNE4-202ENST00000340477 GUCY1B3Q02153 619 aa21.69■■□□□ 1.06
SYNE4-202ENST00000340477 MBOAT7Q96N66 472 aa21.69■■□□□ 1.06
SYNE4-202ENST00000340477 MTIF3Q9H2K0 278 aaKnown RBP21.69■■□□□ 1.06
SYNE4-202ENST00000340477 RNPEPQ9H4A4 650 aa21.69■■□□□ 1.06
SYNE4-202ENST00000340477 IL23AQ9NPF7 189 aa21.69■■□□□ 1.06
SYNE4-202ENST00000340477 SETD4Q9NVD3 440 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms