RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 BCAP29Q9UHQ4 241 aa18.54■□□□□ 0.56
TRAPPC11-201ENST00000334690 EIF3BP55884 814 aaKnown RBP18.53■□□□□ 0.56
TRAPPC11-201ENST00000334690 CUL1Q13616 776 aa18.53■□□□□ 0.56
TRAPPC11-201ENST00000334690 TRIM50Q86XT4 487 aa18.53■□□□□ 0.56
TRAPPC11-201ENST00000334690 RHOT2Q8IXI1 618 aa18.53■□□□□ 0.56
TRAPPC11-201ENST00000334690 HAUS2Q9NVX0 235 aa18.53■□□□□ 0.56
TRAPPC11-201ENST00000334690 BARHL2Q9NY43 387 aa18.53■□□□□ 0.56
TRAPPC11-201ENST00000334690 ZNF609O15014 1411 aa18.53■□□□□ 0.56
TRAPPC11-201ENST00000334690 COL15A1P39059 1388 aa18.53■□□□□ 0.56
TRAPPC11-201ENST00000334690 IQSEC2Q5JU85 1478 aa18.53■□□□□ 0.56
TRAPPC11-201ENST00000334690 NOL3O60936 208 aaKnown RBP18.53■□□□□ 0.56
TRAPPC11-201ENST00000334690 IL9RQ01113 521 aa18.53■□□□□ 0.56
TRAPPC11-201ENST00000334690 BCS1LQ9Y276 419 aa18.53■□□□□ 0.56
TRAPPC11-201ENST00000334690 UTYO14607 1347 aa18.53■□□□□ 0.56
TRAPPC11-201ENST00000334690 KIF28PB7ZC32 967 aa18.53■□□□□ 0.56
TRAPPC11-201ENST00000334690 SLC8A1P32418 973 aa18.53■□□□□ 0.56
TRAPPC11-201ENST00000334690 IQCB1Q15051 598 aa18.53■□□□□ 0.56
TRAPPC11-201ENST00000334690 GUF1Q8N442 669 aaKnown RBP18.53■□□□□ 0.56
TRAPPC11-201ENST00000334690 LRRC8CQ8TDW0 803 aa18.53■□□□□ 0.56
TRAPPC11-201ENST00000334690 CNOT10Q9H9A5 744 aaKnown RBP18.53■□□□□ 0.56
TRAPPC11-201ENST00000334690 STK38LQ9Y2H1 464 aa18.53■□□□□ 0.56
TRAPPC11-201ENST00000334690 PTPN22Q9Y2R2 807 aa18.53■□□□□ 0.56
TRAPPC11-201ENST00000334690 RRP15Q9Y3B9 282 aaKnown RBP18.53■□□□□ 0.56
TRAPPC11-201ENST00000334690 TRIM49BA6NDI0 452 aa18.52■□□□□ 0.56
TRAPPC11-201ENST00000334690 TPD52P55327 224 aaPredicted RBP18.52■□□□□ 0.56
TRAPPC11-201ENST00000334690 KAZNQ674X7 775 aa18.52■□□□□ 0.56
TRAPPC11-201ENST00000334690 NEK9Q8TD19 979 aa18.52■□□□□ 0.56
TRAPPC11-201ENST00000334690 PPP4R1Q8TF05 950 aa18.52■□□□□ 0.56
TRAPPC11-201ENST00000334690 PCIF1Q9H4Z3 704 aa18.52■□□□□ 0.56
TRAPPC11-201ENST00000334690 NNTQ13423 1086 aa18.52■□□□□ 0.56
TRAPPC11-201ENST00000334690 FAM20AQ96MK3 541 aa18.52■□□□□ 0.56
TRAPPC11-201ENST00000334690 FMO2Q99518 471 aa18.52■□□□□ 0.56
TRAPPC11-201ENST00000334690 VCXQ9H320 206 aa18.52■□□□□ 0.56
TRAPPC11-201ENST00000334690 IFNAR2P48551 515 aa18.52■□□□□ 0.56
TRAPPC11-201ENST00000334690 EFCAB13Q8IY85 973 aa18.52■□□□□ 0.56
TRAPPC11-201ENST00000334690 ADD3Q9UEY8 706 aaKnown RBP18.52■□□□□ 0.56
TRAPPC11-201ENST00000334690 A0A1W2PQC6 194 aa18.52■□□□□ 0.55
TRAPPC11-201ENST00000334690 POTEMA6NI47 508 aa18.52■□□□□ 0.55
TRAPPC11-201ENST00000334690 TXNRD1Q16881 649 aa18.52■□□□□ 0.55
TRAPPC11-201ENST00000334690 CAPN12Q6ZSI9 719 aa18.52■□□□□ 0.55
TRAPPC11-201ENST00000334690 USP17L5A8MUK1 530 aa18.51■□□□□ 0.55
TRAPPC11-201ENST00000334690 PRR29P0C7W0 189 aa18.51■□□□□ 0.55
TRAPPC11-201ENST00000334690 TERF2Q15554 542 aa18.51■□□□□ 0.55
TRAPPC11-201ENST00000334690 PHLDB3Q6NSJ2 640 aa18.51■□□□□ 0.55
TRAPPC11-201ENST00000334690 CC2D1AQ6P1N0 951 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC11-201ENST00000334690 QTRT2Q9H974 415 aaKnown RBP18.51■□□□□ 0.55
TRAPPC11-201ENST00000334690 IFT122Q9HBG6 1241 aa18.51■□□□□ 0.55
TRAPPC11-201ENST00000334690 IFT88Q13099 833 aa18.51■□□□□ 0.55
TRAPPC11-201ENST00000334690 PROCA1Q8NCQ7 364 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC11-201ENST00000334690 CEP152O94986 1710 aa18.51■□□□□ 0.55
TRAPPC11-201ENST00000334690 CAPN9O14815 690 aa18.51■□□□□ 0.55
TRAPPC11-201ENST00000334690 CTNND1O60716 968 aaKnown RBP18.51■□□□□ 0.55
TRAPPC11-201ENST00000334690 NCAPG2Q86XI2 1143 aa18.51■□□□□ 0.55
TRAPPC11-201ENST00000334690 EXOC8Q8IYI6 725 aa18.51■□□□□ 0.55
TRAPPC11-201ENST00000334690 TTC19Q6DKK2 380 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 RINT1Q6NUQ1 792 aa18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 CEP95Q96GE4 821 aa18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 ZNF512BQ96KM6 892 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 TTLL3Q9Y4R7 772 aa18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 NMT2O60551 498 aa18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 SLC44A5Q8NCS7 719 aa18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 NEDD1Q8NHV4 660 aa18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 CCHCR1Q8TD31 782 aa18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 MROH7-TTC4A0A0A0MT08 1334 aa18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 ZNF335Q9H4Z2 1342 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 MYO3AQ8NEV4 1616 aa18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 A0A087WUV0 522 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 TTC26A0AVF1 554 aa18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 HMGB1P1B2RPK0 211 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 TEX33O43247 280 aa18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 NR1D1P20393 614 aa18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 KCNB1Q14721 858 aa18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 MAP3K21Q5TCX8 1036 aa18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 METTL16Q86W50 562 aaKnown RBP18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 FAM84BQ96KN1 310 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 FBXO2Q9UK22 296 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 H7C0C1 242 aa18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 ASNSP08243 561 aa18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 ADRA2BP18089 450 aa18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 ATP5OP48047 213 aa18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 PPM1FP49593 454 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 MIS18BP1Q6P0N0 1132 aa18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 RAD54LQ92698 747 aa18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 EDEM3Q9BZQ6 932 aa18.5■□□□□ 0.55
TRAPPC11-201ENST00000334690 MIF4GDA9UHW6 222 aaKnown RBP18.49■□□□□ 0.55
TRAPPC11-201ENST00000334690 MAP2K2P36507 400 aa18.49■□□□□ 0.55
TRAPPC11-201ENST00000334690 KCTD2Q14681 263 aa18.49■□□□□ 0.55
TRAPPC11-201ENST00000334690 FAM182BQ5T319 152 aa18.49■□□□□ 0.55
TRAPPC11-201ENST00000334690 SULF1Q8IWU6 871 aa18.49■□□□□ 0.55
TRAPPC11-201ENST00000334690 POC1B-GALNT4F8VUJ3 575 aa18.49■□□□□ 0.55
TRAPPC11-201ENST00000334690 HOXA13P31271 388 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC11-201ENST00000334690 ARHGEF18Q6ZSZ5 1173 aa18.49■□□□□ 0.55
TRAPPC11-201ENST00000334690 CDKL2Q92772 493 aa18.49■□□□□ 0.55
TRAPPC11-201ENST00000334690 ANAPC5Q9UJX4 755 aa18.49■□□□□ 0.55
TRAPPC11-201ENST00000334690 DIS3Q9Y2L1 958 aaKnown RBP18.49■□□□□ 0.55
TRAPPC11-201ENST00000334690 INHBAP08476 426 aa18.49■□□□□ 0.55
TRAPPC11-201ENST00000334690 CLTAP09496 248 aa18.49■□□□□ 0.55
TRAPPC11-201ENST00000334690 DR1Q01658 176 aa18.49■□□□□ 0.55
TRAPPC11-201ENST00000334690 CPVLQ9H3G5 476 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms