RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 TAB3Q8N5C8 712 aaPredicted RBP17.88■□□□□ 0.45
SFXN1-201ENST00000321442 DNAJC17Q9NVM6 304 aaKnown RBP17.88■□□□□ 0.45
SFXN1-201ENST00000321442 L1RE1Q9UN81 338 aa17.88■□□□□ 0.45
SFXN1-201ENST00000321442 RGPD8O14715 1765 aaPredicted RBP17.88■□□□□ 0.45
SFXN1-201ENST00000321442 HIP1RO75146 1068 aa17.88■□□□□ 0.45
SFXN1-201ENST00000321442 NEDD9Q14511 834 aa17.88■□□□□ 0.45
SFXN1-201ENST00000321442 PRAMEF18Q5VWM3 479 aa17.88■□□□□ 0.45
SFXN1-201ENST00000321442 LMNTD2Q8IXW0 634 aa17.88■□□□□ 0.45
SFXN1-201ENST00000321442 PAF1Q8N7H5 531 aa17.88■□□□□ 0.45
SFXN1-201ENST00000321442 MCUR1Q96AQ8 359 aa17.88■□□□□ 0.45
SFXN1-201ENST00000321442 CCDC127Q96BQ5 260 aa17.88■□□□□ 0.45
SFXN1-201ENST00000321442 NAP1L4Q99733 375 aaKnown RBP17.88■□□□□ 0.45
SFXN1-201ENST00000321442 IMPG2Q9BZV3 1241 aa17.88■□□□□ 0.45
SFXN1-201ENST00000321442 ECE2O60344 883 aa17.87■□□□□ 0.45
SFXN1-201ENST00000321442 GH2P01242 217 aa17.87■□□□□ 0.45
SFXN1-201ENST00000321442 GYS1P13807 737 aa17.87■□□□□ 0.45
SFXN1-201ENST00000321442 SLC8A1P32418 973 aa17.87■□□□□ 0.45
SFXN1-201ENST00000321442 RNF14Q9UBS8 474 aa17.87■□□□□ 0.45
SFXN1-201ENST00000321442 GAS8O95995 478 aa17.87■□□□□ 0.45
SFXN1-201ENST00000321442 MKRN3Q13064 507 aaKnown RBP17.87■□□□□ 0.45
SFXN1-201ENST00000321442 RPAINQ86UA6 219 aa17.87■□□□□ 0.45
SFXN1-201ENST00000321442 PPM1KQ8N3J5 372 aa17.87■□□□□ 0.45
SFXN1-201ENST00000321442 STAG2Q8N3U4 1231 aa17.87■□□□□ 0.45
SFXN1-201ENST00000321442 WHAMMQ8TF30 809 aa17.87■□□□□ 0.45
SFXN1-201ENST00000321442 MAGEF1Q9HAY2 307 aa17.87■□□□□ 0.45
SFXN1-201ENST00000321442 LAD1O00515 517 aa17.87■□□□□ 0.45
SFXN1-201ENST00000321442 PCP11498 1178 aaKnown RBP17.87■□□□□ 0.45
SFXN1-201ENST00000321442 GUCY2CP25092 1073 aa17.87■□□□□ 0.45
SFXN1-201ENST00000321442 ADCY8P40145 1251 aa17.87■□□□□ 0.45
SFXN1-201ENST00000321442 CRKP46108 304 aa17.87■□□□□ 0.45
SFXN1-201ENST00000321442 CROCCP2Q86T23 111 aa17.87■□□□□ 0.45
SFXN1-201ENST00000321442 COL23A1Q86Y22 540 aaPredicted RBP17.87■□□□□ 0.45
SFXN1-201ENST00000321442 KLHL29Q96CT2 875 aa17.87■□□□□ 0.45
SFXN1-201ENST00000321442 CEP95Q96GE4 821 aa17.87■□□□□ 0.45
SFXN1-201ENST00000321442 EMILIN3Q9NT22 766 aa17.87■□□□□ 0.45
SFXN1-201ENST00000321442 SERPING1P05155 500 aa17.87■□□□□ 0.45
SFXN1-201ENST00000321442 CCNI2Q6ZMN8 369 aaPredicted RBP17.87■□□□□ 0.45
SFXN1-201ENST00000321442 OTUD6AQ7L8S5 288 aa17.87■□□□□ 0.45
SFXN1-201ENST00000321442 ILDR1Q86SU0 546 aaPredicted RBP17.87■□□□□ 0.45
SFXN1-201ENST00000321442 FMNL3Q8IVF7 1028 aa17.87■□□□□ 0.45
SFXN1-201ENST00000321442 VPS37BQ9H9H4 285 aa17.87■□□□□ 0.45
SFXN1-201ENST00000321442 TBK1Q9UHD2 729 aa17.87■□□□□ 0.45
SFXN1-201ENST00000321442 USP17L5A8MUK1 530 aa17.86■□□□□ 0.45
SFXN1-201ENST00000321442 CD44P16070 742 aaKnown RBP17.86■□□□□ 0.45
SFXN1-201ENST00000321442 IRAK1P51617 712 aa17.86■□□□□ 0.45
SFXN1-201ENST00000321442 ANKRD40Q6AI12 368 aa17.86■□□□□ 0.45
SFXN1-201ENST00000321442 COA1Q9GZY4 146 aa17.86■□□□□ 0.45
SFXN1-201ENST00000321442 RIC8AQ9NPQ8 531 aa17.86■□□□□ 0.45
SFXN1-201ENST00000321442 DUSP10Q9Y6W6 482 aa17.86■□□□□ 0.45
SFXN1-201ENST00000321442 DCCP43146 1447 aa17.86■□□□□ 0.45
SFXN1-201ENST00000321442 LOC102724159A0A0B4J2E5 919 aa17.86■□□□□ 0.45
SFXN1-201ENST00000321442 SARNPP82979 210 aaKnown RBP17.86■□□□□ 0.45
SFXN1-201ENST00000321442 ATP2C1P98194 919 aaPredicted RBP17.86■□□□□ 0.45
SFXN1-201ENST00000321442 PWP2Q15269 919 aaKnown RBP17.86■□□□□ 0.45
SFXN1-201ENST00000321442 MUM1L1Q5H9M0 696 aa17.86■□□□□ 0.45
SFXN1-201ENST00000321442 FAM178BQ8IXR5 827 aa17.86■□□□□ 0.45
SFXN1-201ENST00000321442 FMO2Q99518 471 aa17.86■□□□□ 0.45
SFXN1-201ENST00000321442 ELAC2Q9BQ52 826 aaKnown RBP17.86■□□□□ 0.45
SFXN1-201ENST00000321442 EHD2Q9NZN4 543 aa17.86■□□□□ 0.45
SFXN1-201ENST00000321442 CAPN11Q9UMQ6 739 aa17.86■□□□□ 0.45
SFXN1-201ENST00000321442 LRRIQ3A6PVS8 624 aaPredicted RBP17.86■□□□□ 0.45
SFXN1-201ENST00000321442 MYL1P05976 194 aa17.86■□□□□ 0.45
SFXN1-201ENST00000321442 HOXA13P31271 388 aaPredicted RBP17.86■□□□□ 0.45
SFXN1-201ENST00000321442 DPYDQ12882 1025 aa17.86■□□□□ 0.45
SFXN1-201ENST00000321442 VPS52Q8N1B4 723 aa17.86■□□□□ 0.45
SFXN1-201ENST00000321442 FNBP1Q96RU3 617 aa17.86■□□□□ 0.45
SFXN1-201ENST00000321442 TMEM47Q9BQJ4 181 aa17.86■□□□□ 0.45
SFXN1-201ENST00000321442 LIMA1Q9UHB6 759 aaKnown RBP17.86■□□□□ 0.45
SFXN1-201ENST00000321442 KDM3AQ9Y4C1 1321 aa17.86■□□□□ 0.45
SFXN1-201ENST00000321442 HMGB1P1B2RPK0 211 aaPredicted RBP17.85■□□□□ 0.45
SFXN1-201ENST00000321442 THAP12O43422 761 aa17.85■□□□□ 0.45
SFXN1-201ENST00000321442 FGGP02679 453 aa17.85■□□□□ 0.45
SFXN1-201ENST00000321442 SNX1Q13596 522 aa17.85■□□□□ 0.45
SFXN1-201ENST00000321442 PFKFB3Q16875 520 aaPredicted RBP17.85■□□□□ 0.45
SFXN1-201ENST00000321442 CC2D2BQ6DHV5 1058 aa17.85■□□□□ 0.45
SFXN1-201ENST00000321442 HPCAL4Q9UM19 191 aa17.85■□□□□ 0.45
SFXN1-201ENST00000321442 SNX12Q9UMY4 172 aa17.85■□□□□ 0.45
SFXN1-201ENST00000321442 KLK7P49862 253 aa17.85■□□□□ 0.45
SFXN1-201ENST00000321442 SEPT2Q15019 361 aa17.85■□□□□ 0.45
SFXN1-201ENST00000321442 SRBD1Q8N5C6 995 aaKnown RBP17.85■□□□□ 0.45
SFXN1-201ENST00000321442 KIFAP3Q92845 792 aa17.85■□□□□ 0.45
SFXN1-201ENST00000321442 BRIP1Q9BX63 1249 aa17.85■□□□□ 0.45
SFXN1-201ENST00000321442 SNX24Q9Y343 169 aa17.85■□□□□ 0.45
SFXN1-201ENST00000321442 SEC24CP53992 1094 aa17.85■□□□□ 0.45
SFXN1-201ENST00000321442 MAGOHP61326 146 aaKnown RBP17.85■□□□□ 0.45
SFXN1-201ENST00000321442 ERVK-24P63145 666 aa17.85■□□□□ 0.45
SFXN1-201ENST00000321442 SLC27A3Q5K4L6 730 aa17.85■□□□□ 0.45
SFXN1-201ENST00000321442 CHUKO15111 745 aa17.84■□□□□ 0.45
SFXN1-201ENST00000321442 ADRA2BP18089 450 aa17.84■□□□□ 0.45
SFXN1-201ENST00000321442 ALX1Q15699 326 aa17.84■□□□□ 0.45
SFXN1-201ENST00000321442 CCDC38Q502W7 563 aa17.84■□□□□ 0.45
SFXN1-201ENST00000321442 FAM83BQ5T0W9 1011 aa17.84■□□□□ 0.45
SFXN1-201ENST00000321442 THOC1Q96FV9 657 aaKnown RBP17.84■□□□□ 0.45
SFXN1-201ENST00000321442 HPSEQ9Y251 543 aa17.84■□□□□ 0.45
SFXN1-201ENST00000321442 BCL9O00512 1426 aa17.84■□□□□ 0.45
SFXN1-201ENST00000321442 GBP1P32455 592 aa17.84■□□□□ 0.45
SFXN1-201ENST00000321442 TRAF1Q13077 416 aa17.84■□□□□ 0.45
SFXN1-201ENST00000321442 CCDC93Q567U6 631 aa17.84■□□□□ 0.45
SFXN1-201ENST00000321442 ADGRA1Q86SQ6 560 aa17.84■□□□□ 0.45
SFXN1-201ENST00000321442 MLXIPLQ9NP71 852 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms